Gracilinanus agilis (agile gracile opossum): 123247942
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Entry
123247942 CDS
T07702
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
gas05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123247942 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
123247942 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123247942 (HBS1L)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123247942 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
UBA_RAD5A
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
123247942
NCBI-ProteinID:
XP_044532970
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All DBs
Position
4:complement(392733873..392869850)
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AA seq
683 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPPSFVEPVEEYDY
EDTKESTNSVSNHQLSGIDQARLYSCLDHMREVLGNDVSDQKLIEAVLQNKFDVQKALAM
VLDQDKKQAMSEDAVSVGKATKGKAVDPLSFRSESEIVPKVTKMTVSGKKQTMGFEVPGV
TAEENGDSVHTPHKGPPIEDSNIASSGILEPVSKSALPSHTIQALEEQTTPTPVKKSNKL
KQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
TGKLGHFLKQAGFKESDVAFIPTSGLSGENLITKSQSSELTKWYQGQCLLEQIDSFKPPQ
RSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEPV
DWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFPVL
LHYQTVSEPATIRRLISILHKSTGEVTKKRPKLLTKGQNALVELQTQRPVALELYKDFKE
LGRFMLRYSGSTIAAGVVTEIKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttctccatcaacagctgctcagttt
atttactcaagacgtgacaaaccaccatcattcgttgagccagtagaagaatatgactat
gaagatacaaaagaatctacaaactctgtttctaatcaccagcttagtgggattgatcaa
gctcgtctttattcatgccttgatcacatgagagaggtacttggaaatgatgtctcagat
cagaaactgattgaagcagtgctacagaacaaatttgatgtgcagaaagcattagcaatg
gtgcttgatcaagataaaaagcaggccatgagtgaggatgctgtctctgtgggaaaggca
acaaaaggaaaagcagtagatcctctgtcatttcgaagtgaatctgaaattgtgccaaaa
gttaccaaaatgactgtatctgggaagaagcaaactatgggatttgaagttcctggagtg
actgctgaagaaaatggcgatagtgtccacacacctcataaaggacctcctattgaagat
tccaacattgcttcttctggtattcttgaaccagtttctaaatcagctcttccatcccac
accattcaggcattagaagaacagacaacgccaacaccagtgaaaaagtctaacaagctg
aagcagcaaatagatgtgaaggctgaattggagaagaggcaagggggaaagcagctgctc
aacttggtggtcattggtcatgtggatgctgggaaaagcactcttatgggtcatctgctt
tatctcctgggcaatgtaaataaaagaactatgcacaaatatgaacaagaatctaaaaag
gctggtaaagcctcctttgcttatgcatgggtcttggatgagactggagaagaaagagaa
agaggtgttacaatggatgtgggtatgacaaagtttgagaccaagaccaaagttattaca
ttaatggatgctccaggtcataaggacttcattccaaatatgattacaggagctgcccag
gctgatgttgctgttttagttgtggatgccagcaggggggagtttgaagctgggtttgag
actggaggacagacacgagaacatggactcttggttcgttctcttggagtaacacagctg
gcagttgcagttaataaaatggatcaggttaattggcagcaagaaagatttcaagagatt
actggcaaacttggacacttccttaagcaggctggttttaaggaaagtgatgtggccttc
atccctacaagtggtctcagtggagaaaacctaattacaaaatctcaatcaagtgaacta
acaaaatggtatcaaggacagtgtttgttagaacaaattgattctttcaagcctccacaa
agatctattgaaaaaccgtttagattatgtgtatctgatgtttttaaagatcaaggatct
ggattttgtgtgactggtaaaattgaagctggttatatccagaccggtgaccgactgctt
gcaatgcctcctaatgaaacttgtactgcaaaaggaatcatgctacatgatgaaccagtt
gattgggctgcagcaggagatcacgttagtctcaccttggttggtatggatatcatcaaa
atcaatgttggttgtattttctgtggtcccaaagaacccattaaagcctgtacccgtttc
agagctcgaatcctcatctttaatattgaaattcccatcactaaaggattccctgtgctg
ttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagcatcctacac
aaaagcactggtgaggtcacaaagaaaagacccaagttgttgactaaaggccagaatgct
ttagtagaactacaaacacaaagacctgttgctcttgaattatacaaagactttaaagaa
ctggggagatttatgctgcgttacagtggttctactatagctgcaggtgttgtcactgag
ataaaagaatga
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