Gracilinanus agilis (agile gracile opossum): 123247995
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Entry
123247995 CDS
T07702
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123247995 (PRDM13)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
123247995 (PRDM13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
Motif
Other DBs
NCBI-GeneID:
123247995
NCBI-ProteinID:
XP_044533061
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Position
4:347185812..347194163
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AA seq
741 aa
AA seq
DB search
MHTNRAAAISVSAESCIPAGLRLGPVPGIFKLGKYLSDRREPGPKKKVRMVRGELVDESG
GSPLEWIGLIRAARNTQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDI
PTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLHFHCVLSGGGGRAFLHHEHAARPTA
APTLDGFRLSPKPAAPELAVAAPAATLRNHSQGPPPPHQACGAREVIKREVSSSTSPPPL
GKLGASAKKTGAFGREEQERALDMSVGPGRGHGHFLGMVGGSPAGSGSLAFYPGARSAFK
PTGLAKAAAAAVAVHGGDSYREDSGAGAGKAAGGLGFGKLLGGVKLGGRPGHEPLVASGG
GGHHHHHHHHSHHHAKCLHTGDGPPPPPPPPPPPPPPPVLPCAGALRGFPLFSGHLEEAS
AFKHVERALPAGGLPSGRYAQVPSTAGLHLERFSLPPFEAGGLKSYPGECSHLPAVMPAF
TVYNGELLYGSSTAAAAAAAYYPLKLHFGSLLKYPESVSYFSGPAAAAAAAAAAAAAAAA
LNPGELGSLASIDREIAMHTQQLSEIAAEKSRGRLDGALQPIGVPGGGGGGGGGSGGGGG
SGVGGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRL
HAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSVHAKASEEQDCAQGYPPEPGDPKSD
NESDVDVCFTDDQSDQETGGQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaaacagggctgccgccatcagcgtgagcgcagaaagctgcatcccagccggg
ctgcgcttaggtcctgtgcccggcatcttcaaactgggcaaatacttgtcagaccgcagg
gagccaggacccaagaaaaaggtgcgaatggtgagaggggaattagtggatgaatctgga
ggatcccctctggagtggatagggttaatccgagcggccaggaatactcaggaacagact
ctggaagctattgcggacttgccaggaggacagatcttctatagggcgcttagagatgta
caaccaggtgaggagctgaccgtgtggtattcgaactccttggctcaatggttcgacatc
cccaccaccgctactccaacgcacgatgagaaaggggaggagcgctacatctgttggtat
tgctggaggacttttcggtaccccaacagcctcaaggcgcacctgcatttccattgtgtg
ctcagtggcggcggtggtcgagccttcctgcaccacgagcacgcggcccgtccaaccgct
gccccgaccctcgacggtttccgcctctccccgaaacccgcggctcccgagctcgctgtg
gccgcccccgcggccacactgcgaaaccactcgcaagggccgcctcctccccaccaggcc
tgtggggcgcgcgaggtgatcaagcgcgaggtgtcctcatctacctcgccgccccccctt
ggcaaactgggagcttcggccaagaagacaggcgcgttcggtcgcgaggagcaggagcgt
gcactagacatgagtgtgggaccaggcagggggcatggtcacttccttggtatggtaggc
ggttccccggccggttccggcagcctggctttctatcccggggcgcgctccgctttcaag
cccacgggccttgccaaggctgcggctgcagccgtggctgtccatggaggcgactcctat
cgtgaggacagcggggcaggtgccggaaaggccgcaggcggtctgggttttggcaaactc
ttgggcggggtcaagctcggcggccgtcccgggcacgaacccctggtagcgagtggcgga
ggaggtcaccaccatcatcaccaccaccacagccaccaccacgccaaatgcctgcacact
ggagacggtcctcctcctccgcctccaccgcctcctcctccgccgcctcctcccgtgttg
ccctgcgccggagcccttcggggtttcccgctcttctctggtcacctggaggaggcgtcg
gcattcaagcacgtggagcgggccctgccggcgggcgggcttcccagcggccgctacgcc
caggtaccctcgactgctgggctacatctggagcgcttctcgctccctccttttgaggcc
gggggtcttaagtcttaccccggagaatgcagccaccttccggccgtcatgccggccttc
accgtgtataatggggagctgctatacggctcttctaccgctgcagcggccgctgccgct
tactaccctctcaagctgcacttcggcagcctgctcaaataccccgagtccgtgtcttac
ttcagcggacccgcggcggccgcggctgcagctgctgctgctgcggccgccgcggcggct
ctgaatcccggcgagctgggttctctggccagcatcgaccgagagatcgccatgcacacg
cagcagctgtccgagattgcagctgagaaaagccgtggccgcctggacggggcgctgcag
cccatcggggtcccgggcggaggcgggggaggtggaggaggtagtggcgggggtgggggc
tctggggtgggcgggaagccaaagacaggccacctgtgcctgtactgcggcaagttatat
tcccgcaaatacgggctcaagatccacatgcggactcacacgggctacaagcccctcaag
tgtaaagtgtgcctacgtcccttcggcgatcctagcaacctcaacaagcacatcaggttg
cacgccgaaggtaacactccgtatcgctgtgaattctgcggaaaggtgctggtcaggcgc
cgagacttggagagacacgttaaatcccgccacccaggccagagcgtgcacgccaaggcg
agtgaagagcaggactgcgctcagggttacccaccagagccaggggaccctaagagcgac
aacgaaagcgacgtggatgtctgtttcacagacgatcagagcgaccaggaaaccgggggg
cagtag
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