Gracilinanus agilis (agile gracile opossum): 123248653
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Entry
123248653 CDS
T07702
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04082
Neuroactive ligand signaling
gas04721
Synaptic vesicle cycle
gas04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123248653 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
123248653 (SLC6A12)
04721 Synaptic vesicle cycle
123248653 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gas02000
]
123248653 (SLC6A12)
Transporters [BR:
gas02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123248653 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123248653
NCBI-ProteinID:
XP_044533431
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Position
5:complement(205554511..205594484)
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AA seq
607 aa
AA seq
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MDGKVVILEDGPPTVSWGPEEEEKEEKIEERGQWANKMEFVLSVAGEIIGLGNVWRFPYL
CYKNGGGAFFIPYFIFFFTCGIPLFFLETALGQYTSQGSVTAWKKICPLFEGIGVASVVI
EAYLNVYYIVILAWALFYLFSSFTSQLPWTTCTNFWNTEYCVDFMNCSGSNNLKSSNKSI
SPVIEFWEKRVLGITMGIHDLGALRWELALCLLLAWIMCYFCIWKGIKTTGKVVYFTATF
PYLMLIILLIRGVTLPGAYEGIIYYLKPDLVRLKDPQVWMDAGTQIFYSFAISQGCLTAL
GSYNKYHNNCYRDCIALCFLNSATSFVAGFVVFSILGFMSQEQGMPISQVAESGPGLAFI
AFPKAVTMMPISQLWSCLFFIMLIFLGLDSQFVCMECLVTASMDMFPRQLRKPGRRELLI
LFMAVVFYLIGLLLVTEGGMYVFQLFDYYATSGMCLLFLSFLEVICIGWVYGAERFYDNV
EDMIGYRPWPLVKICWLFLTPGLCLATFLFSLIKYTPLKYNNVYVYPPWGYSIGWMLALS
SMVCVPIFFIIGLLKSQGSFKKRLQQLISPALDLPQPKRYSDGVHRPSCSFSPAKEGLMT
LEKETHL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaaagtggtgatcctggaggatggtcccccaactgtttcctggggccctgaa
gaagaggagaaggaggagaagattgaagagcgtggtcagtgggctaataagatggagttt
gtgctatcagtggctggagagatcattggcctaggcaatgtttggaggttcccatatctc
tgctacaagaatggaggcggtgccttctttatcccttacttcatcttcttcttcacctgt
ggcatcccacttttcttcctggagacagcactgggtcagtacaccagtcagggcagtgtt
acagcctggaaaaagatctgtcccctctttgagggcattggtgtagcttctgtggtcatt
gaggcctatctaaatgtttactacatcgttatcctcgcctgggccctcttctacctattt
agttccttcacctcacagctgccctggactacttgtaccaatttctggaacacagaatac
tgtgtggattttatgaattgttcaggttcaaataatctgaagtcatcgaacaaaagcatc
tcaccagtcatcgaattctgggagaagcgggtcctgggcattaccatgggcatccatgat
ctaggtgccctacgctgggagctggccctgtgccttctgcttgcctggattatgtgctat
ttctgcatctggaagggaattaagactacagggaaggtggtttatttcacagccacattc
ccttatctgatgttgatcatcttgctgattcgaggagtcacccttccgggggcctatgaa
gggatcatctattacctgaaaccagacttggtccgcctcaaggacccccaggtgtggatg
gatgcaggcactcagatcttctactcctttgccatcagtcagggttgcctcaccgccctg
ggcagctacaacaaataccacaacaactgttacagggactgtattgccctctgctttttg
aatagtgcaaccagctttgtggctggctttgttgtcttctccatcttgggcttcatgtct
caggagcaagggatgcccatctctcaagtggcagaatcaggtcctggcctggccttcatt
gcattccctaaggcagtaaccatgatgcccatatctcagctttggtcctgtctcttcttc
atcatgctgatattcttgggactggatagccagtttgtctgtatggagtgcctggtgaca
gcctccatggacatgttccccaggcagctacggaagccagggaggagggaactcctcatc
ctcttcatggctgtcgtgttctacttgatcggacttctccttgtcactgagggtggaatg
tacgtattccagctgtttgattattatgccaccagtggcatgtgcctactcttcctttca
tttttagaggtgatctgcattggctgggtgtatggagccgaacgtttctatgataatgtt
gaagacatgattggctaccggccatggccactggtgaagatctgctggcttttcctaact
cctggactttgcttggccacatttctgttctccctgatcaagtacacacccctcaaatat
aacaatgtctatgtgtacccaccatggggatattcaattggctggatgctggcactctct
tccatggtctgtgttccaatcttcttcattataggcttactgaagagtcaaggctccttc
aagaagcgccttcaacaacttatctccccagccttggatctgccgcagcccaagcggtat
tccgatggtgttcataggccgagttgttcattttctccagctaaagagggactgatgacc
ttggagaaagagactcacctgtag
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