Gracilinanus agilis (agile gracile opossum): 123248939
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Entry
123248939 CDS
T07702
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123248939 (NPHP3)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
123248939 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
NACHT
AAA_16
AAA_22
MIT
KAP_NTPase
AAA_19
TPR_11
DUF2225
ATPase_2
AAA_14
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
123248939
NCBI-ProteinID:
XP_044533789
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All DBs
Position
5:complement(41878267..41921041)
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AA seq
1333 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGGGGGEACEIPVEVKPKARLLRGSFRRAGAAGAGAAAGAG
AGARVAGGLLGASFKSTGSSVPELEYAAAECERLKKEYEIFRVSKNQELLAMGRREAKLD
TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEQDRDKVKRQFKIFRETKE
NEIQDLLRAKRELETKLQRLQAQGIQVFDPEESDSDDNCTDVTATGTQCDYWRGGALGSE
PSIGSMMQLQQSHRGPEFAHSSIDVEGPFANVNRDDWDAAVASLLQVTPLFSHSLWSNTV
RCYLISTDETQPEMDIFLRDYSPKLQRMCETIGYFFHAIYFPIENGSHYFNVRKWEIEKS
SLVILFIHLTLPSCLLEDCEEAFLKNSEGKPRLIYHRLEDGQVSSDSVQRLIEQVSYLNK
ANKAKIIDHQGEPAEGVCKMYNYVEKIIKQDILGFENTEQEMKDLENEEDSTIPEENDYG
DVLWDIHDEQEQMEAFQQASNSAYDLGFEKYYQRLNDLVAAAAPIPPLLVSGGPGSGKSL
LLSKWIQLQQKLSPNTLILYHFVGRPRSTSSESASIIKRLTLKLMQHSWSVSGLTLDPGK
LLEEFPRWLEKLSARHQGSIIIIIDSIDQIQQVEKHMKWLIDPLPVNVRVIVSVNVETCP
PAWRLWPTLHLDPLNSKDAKALITAECNCVNIKLTKEQEKKLERHCRSATTCNALYVTLL
GKMITCTAGRASNVDEILQQCFQCQDTVSLYRLVLRSIQESMESDKERDLMKEILCLVSV
SHNGVSESELMELYPALSWSVLTSLVHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYMEE
SQDISTYREKLIEYFTTQLSKARVTWRCADELPWLFQQQGNKQKLHECLLNLFVSQNLYK
RGHFAELLSYWQLVGRDKGSMATEYFDSLKQYEKSCEGEESMMSLADLYETLGRFLKDLG
LLSQAVVPLQRSLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEILEN
TYGSEHPLIARELDALATLYQKQNKYEQAEHLRKKSFKIRQKVARRKGNLYGFALLRRRA
LQLEELTLGKDTPDNARTLNELGVLYYLQNNLEAADLFLKRSLEMRERVLGPDHPDCAQS
LNNLAALYNEKKQYAEAEELYERALDIRRRALAPDHPSLAYTGKHLAILYKKVGKLDKAV
PLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKPIEALPLYERALKIYEDSLGRMH
PRVGETLKNLAVLSYEGGDFEKAAELYKRAMEIKEAETSLVGGNALSRHSSSGDTFSLKT
TLSPNVFLLHGQR
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgcctcgtccctagtgagtcccgcgggcggggaagtgattgaggacacatac
gggggtggcgggggcgaagcgtgtgagatcccggtggaggtgaagcccaaggcccgcctg
ctacgcggttcgttccgccgggcgggggctgcgggggccggggcagcggccggggccggg
gccggggcgcgggtcgctggcgggctactcggggctagcttcaagtccactggctcgtcc
gtgcctgagctggagtatgcggcggcagagtgcgagcggctcaagaaggagtacgagatc
ttccgggtcagcaagaaccaggagttgctggccatgggccgccgggaagccaagctggac
acggagaacaagcggctgcgagctgagctgcaggctcttcagaaaacttatcagaagata
cttcgcgaaaaggaaagtgctttggaagctaaatatcaggctatggagagagcagctaca
tttgaacaagatagagataaagttaaaagacaattcaagatttttagagaaacaaaggaa
aatgaaatccaggacttgttaagagccaaacgagaattggagaccaaacttcagagactc
caggctcaaggcattcaagtatttgatcctgaggagtctgattcagatgacaattgcaca
gatgtcactgctactggaactcaatgtgactattggcgtggtggtgccttgggaagtgag
ccttccataggcagtatgatgcagcttcagcagtctcacaggggacccgaatttgcccat
agttctatagatgtagaaggaccctttgcaaatgttaaccgagatgattgggatgctgct
gtagctagtttattacaagttactccattgttctcacattctctgtggagtaacacagtc
agatgttacctcatcagcacagacgaaacacagcctgagatggacattttcttgagggac
tactcacccaaactccaaagaatgtgtgagacaataggatacttcttccatgcaatttat
tttccaatagaaaatggaagtcattatttcaatgtaagaaaatgggaaatcgagaagagt
tcattagttattttgtttattcatttaactttaccaagctgtttgttggaggactgtgaa
gaagcatttttgaagaactctgaaggaaagcctcgattgatctatcatcgcttggaggat
ggccaggtcagctctgactctgtccagcggttgattgaacaagtttcttacttgaacaag
gctaacaaggccaagattattgaccaccaaggagagcctgcagaaggagtatgtaaaatg
tataattatgtggagaagattattaaacaggacattttgggctttgagaacacagagcag
gaaatgaaggatttagaaaatgaagaagattctaccattccagaagaaaatgattatggt
gacgttttgtgggacatccatgatgaacaagaacagatggaggcttttcagcaggcttct
aattcagcatatgatctgggatttgagaaatattaccagcgcctgaatgaccttgtggcg
gcagcagcacctatcccaccccttcttgtgtctggaggaccaggctctggaaaatcactt
cttttatccaaatggatacagctgcagcaaaagctttctccaaacacactaattctgtat
cactttgtggggagacccaggtctactagctcagagtcggcctcaatcattaaacgactg
actttaaagctgatgcagcattcctggtcagtatctgggctaacactggatcctgggaag
ctccttgaggagtttccacgttggctagaaaaactctctgctcgtcatcaaggcagtatt
atcatcattattgattctatagatcagattcagcaagttgaaaaacacatgaagtggctg
atagatcccctgcccgtgaatgtaagagtaattgtttctgtgaatgtggaaacatgccct
ccggcgtggaggttgtggccaacacttcatcttgatcctttaaattcaaaggatgcgaaa
gctcttattactgcagaatgtaactgtgtaaatattaagttgactaaagagcaggaaaag
aaactagagaggcattgtcgttctgctacaacctgcaacgccttgtatgtcacccttttg
ggtaaaatgatcacatgcactgctggaagagccagcaacgtcgatgaaatcttacaacaa
tgtttccagtgtcaggataccgtgtcgttatataggctagtgttgcgatcaattcaggaa
tctatggaaagtgataaagagagagacctaatgaaggagattctctgcctggtcagtgtc
agtcacaatggcgtgagcgaatccgaactgatggagctctaccctgccctgtcctggtct
gtgctcacgtccctggttcatagtttgcacaaaatgtgtttattgacttatgggtgcggc
ttactcaagttccagcacctccaggcatgggaaacagtcagattagaatatatggaagaa
agtcaagatatttctacctatagagaaaagttaatagagtacttcaccactcaactaagt
aaagccagggtgacctggagatgtgctgacgagctcccatggcttttccaacaacagggc
aacaaacagaagctgcatgaatgtctcctcaacctttttgtgtctcaaaacctttataaa
agaggacattttgccgaattgctcagctattggcagctcgttgggagagataagggatcc
atggccacagaatattttgattccttgaagcagtatgagaaaagctgtgaaggagaagaa
agcatgatgtctttagctgatctctatgaaaccctgggtcggtttctcaaggacctaggc
ctcctcagtcaggcggttgttcccttacagaggtctttagaaatccgagaaacagctctg
gatccagatcaccctcgggtggcccagtccctccaccagctggcaggtgtttatgtgcag
tggaagaaatttggcaatgctgaacagttgtataaacaagccctggaaatcttggagaat
acttatggttctgagcatcctcttattgcccgggaacttgatgccctcgcaacattatat
cagaaacaaaacaaatatgagcaagctgaacatctaaggaaaaagtcctttaaaatccga
cagaaagttgcgaggagaaaaggcaatttgtatggatttgccctcctacgtcgacgggcc
ttacagttagaagaactcacactgggtaaagacacaccagataatgctcgaaccctcaat
gagctgggtgttctctattatctgcagaataatcttgaggccgctgacctgtttctgaag
cgctctttagaaatgagggagcgggtcttaggaccagaccatcctgactgtgcacagtct
ttgaacaacctggctgctctctacaacgagaagaagcagtacgcagaggcagaggaactc
tacgaaagagccctggacatcaggagacgggcactggcccctgaccacccttccctggcg
tacacagggaagcacctggcaatcctgtacaagaaagtggggaaacttgacaaggctgtg
ccactttatgagttggctgtagaaatacgtcagaaatcttttggcccaaagcatcctagt
gtagctactgccttggtgaacctcgctgttctctacagtcaaatgaaaaaacctattgaa
gccctgccattgtatgaacgagcattaaagatttatgaagacagcttgggtcggatgcac
ccacgagtgggtgaaacactaaaaaatttggctgtgcttagctacgaaggaggagatttt
gaaaaggctgcagagctctacaaaagagcaatggagataaaagaagcagaaacatctctt
gttggaggaaacgctctctcgagacactcttcaagtggagacacatttagtttaaaaaca
acactttcccctaatgttttccttctccatggacaaaggtaa
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integrated database retrieval system
