Gracilinanus agilis (agile gracile opossum): 123248973
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Entry
123248973 CDS
T07702
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas02010
ABC transporters
gas04148
Efferocytosis
gas04975
Fat digestion and absorption
gas04979
Cholesterol metabolism
gas05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123248973 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123248973 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
123248973 (ABCA1)
04979 Cholesterol metabolism
123248973 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123248973 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gas02000
]
123248973 (ABCA1)
Transporters [BR:
gas02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123248973 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
123248973
NCBI-ProteinID:
XP_044533842
LinkDB
All DBs
Position
1:149224059..149352535
Genome browser
AA seq
2153 aa
AA seq
DB search
MPSAGTLSWVQGIICNANNPCFRYPTPGESPGVVGNFDKSIVSRLFSDARRLLLYSQKDT
SMKDTQKLLATLQQLGTFNLSMKLQDFLVDNETFSEFLQHNLTMSHLAVEEVLDTDINLH
KILLEGMQLEAGVIRNKILFFSDPFFLSPFCCHPYPFSSPCPFQLSTMKSWSDMRQEVMF
LTNVNSSSSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEEVTSFY
DNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRTLMSEVNRTFQNLG
VFHDLEGMWEEISPKIWTFMENSQEMDLIRTLLDDKVNSSLWGQHLVGLNWTTSDIAAFL
AKNPEDVQSTNGPVYTWRDAFNETNWAIQTIARFMECVNLDKLEPIPTEVRLINKSMELL
DERKFWAGIVFTGIAPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLR
YVWGGFAYLQDVVEQAIIRTLTGSEKNTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLA
WIYSVAVIIKGIVYEKEARLKETMRMMGLDNGILWFSWFISSFIPLLVSAGLLVLILKLG
NLLPYSDPSVVFLFLTVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAW
QDYVGFSLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPLEEDGFNLTTSISV
MLFDAFLYGVMTWYIESVFPGQYGIPRPWYFPFTKSYWFGEESDEKSHTGSRQKGTSEIC
MEEEPSHLRLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILT
GLFPPTSGTAYILGKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKN
VKEEMQQMVLDVGLPHKLKTKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR
RGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYL
TLVKKDVDSSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIT
KHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIF
LKVAEDSGVDAETSDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDVDPESRETDLL
SGMDGKGSYQVKGWKLTQQQFVALLWKRWLIARRSRKGFFAQIVLPAVFVCIALVFSLIV
PPFGKYPSLELQPWMYSEQYTFVSNDAPEDAGTQKLLDALTKSPGFGTRCMEGQSNPHIS
CEGGEDKWTTASVPESVMDIFLKGNWTMENPSPACECSNDKIKKMLPVCPAGAGGLPPPQ
RKQNTSDILQNLTGRNISDYLVKTYVQIIAKSLKNKMWVNEFRYGGFSLGTSSIHGLPPS
NEVNAAIDQVKKLFELTKDSSADRFLNSLGSFMTGLDTKNNVKVWFNNKGWHAIGSFLNV
INNAILRANLPEGENPSNYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFV
PASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKS
YVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVL
ELFTNNKFNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDL
VGRNLFAMAVEGVVFFLITVLIQYRFFIKPRPIIAKLPPLNDEDEDVKRERQRILDGGGQ
NDILEIKELTKVYRSKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTKG
DAFLNKNSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGDWA
IRKLGLVKYGEKYAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCAL
SVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGS
NPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQNKKRFHIEDYSV
SQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAFLKSFLQDEKVRESYV
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcaggaactctctcttgggttcaggggattatctgcaatgccaataaccct
tgtttccgatatccaacccctggtgaatctcctggtgttgttggaaacttcgacaagtca
attgtttcacgtctgttctcagatgctcggaggctcctgttatatagccagaaagacacc
agtatgaaggacacacagaaacttttggcaactttgcagcagctggggactttcaactta
agcatgaagcttcaggatttcctggtggacaacgaaaccttctctgaatttttgcagcac
aaccttaccatgtcccatctagctgtggaggaggttctggacactgatatcaatctccac
aaaatattgcttgagggcatgcaattagaggcaggagtcataagaaataagattttgttc
ttctctgacccttttttcctttcacccttttgttgccacccctaccccttctcctctccg
tgcccatttcagttatccaccatgaagagctggagtgacatgagacaagaggtgatgttt
ctaaccaatgtgaacagtagcagttcctctacccagatctaccaagctgtgtctcgaatt
gtgtgtggtcaccctgagggtggagggttgaagatcaagtcccttaattggtacgaggac
aacaactacaaagccctctttggaggaaataacactgaagaggaggtgacgagcttctat
gataattccaccactccttattgcaatgatttaatgaagaatttggaatctagtcctctt
tctcgaattatttggaaggctctaaaacctctgcttgttggaaagatcttatatactcct
gacacaccagctactagaacactcatgtctgaggtgaatagaacctttcagaatctgggt
gtattccatgacttggaagggatgtgggaagaaatcagccccaaaatctggacattcatg
gaaaacagccaggaaatggacctcatccggactctgttggatgataaagttaacagcagt
ctttggggacagcacttggttggtttaaactggacaacctcagatattgcagccttttta
gccaagaaccctgaagatgtccagtcaaccaatggtccagtgtatacctggagagatgct
tttaatgagaccaattgggcaatccagacaatagcacgatttatggagtgtgttaacttg
gacaaacttgagccaatacctacagaagttcgactgatcaacaagtccatggagttatta
gatgaaaggaagttctgggctggcatagtgttcaccggcattgctcctggtagtattgaa
ctgcctcatcatgtcaaatacaagatccggatggatattgacaatgtagaaaggacaaac
aaaatcaaggatgggtactgggaccctggtcctcgtgctgatccatttgaagacttgcgc
tatgtctggggaggcttcgcgtacttgcaagatgtggtggagcaggcaatcatccgaaca
ttgactggctctgaaaagaacaccggcatttatgtgcaacagatgccttatccttgttat
gtagatgatatatttctgcgggtgatgagccgctcaatgcctctcttcatgaccttggct
tggatctactctgtggcggtgatcattaaggggatcgtgtatgagaaagaagcccgacta
aaggagaccatgagaatgatgggtttggacaacggcatcctctggtttagctggttcatt
agcagcttcatcccactccttgtgagtgcagggctgctggtgttaatcctgaagctagga
aacttgctgccctacagtgaccccagtgtggtcttcctgttcctcaccgtcttcgctgtg
gtgaccatcttgcaatgcttcttgatcagcacactcttctctagagccaacttggctgca
gcctgtggtgggatcatctactttacactctacctgccctatgtcctctgtgttgcttgg
caggactatgtgggcttctctctgaaaatctttgctagtcttctgtctcctgtagcattt
ggatttggttgtgagtattttgccctctttgaggagcagggcattggagtacagtgggac
aacctctttgagagccctctcgaggaagatggcttcaacctcaccacctcaatctctgtg
atgctgtttgatgccttcctgtatggtgtgatgacctggtatattgaatcggtctttcca
ggtcaatatggaattccaagaccctggtatttccctttcaccaagtcttattggtttggt
gaggaaagtgatgaaaagagtcatactggttccaggcaaaaagggacttcagaaatctgc
atggaagaagaacctagccacctgcgtctgggggtgtctattcagaacctggtaaaagtt
tatcgggatggcatgaaggtggcagtagatggccttgcattgaatttctatgaagggcag
atcacatcttttctgggacataatggagccgggaaaactaccaccatgtccatcttgact
ggcttgttccccccaacctcaggcactgcctacatccttggaaaagatattcgttcagag
ctgagcactatacggcagaatttgggggtctgtcctcagcataatgtactttttgacatg
ctaacagtagaagaacacatctggttctatgcccgtctaaaagggctgtcagaaaaaaat
gtgaaggaagagatgcagcagatggtactagatgttggtttgccacacaaactgaaaact
aaaacaagtcagctgtctggaggaatgcaaagaaagctgtctgtggctttggcctttgtt
ggtggatcgaaggtcgtcattttagatgaaccgacagctggggtggacccttactctcgc
agagggatatgggagctgctcctgaaatatcgacaaggtcgcaccatcattctgtccact
caccacatggatgaggcagatatactgggggataggattgccatcatttctcatgggaag
ctgtgttgtgttggctcctctctctttttgaagaatcagctgggaacagggtactacctg
accctggtcaagaaggatgtggattcctccctcagttcctgtagaaacagtagcagtacg
gtgtcttacctgaaaaaggaggacagtgtttctcagagcagttctgatgcaggcctgggc
agtgaccatgaaagtgacaccttgacaatagatgtttctgctatctccaacctaattacg
aagcatgtctcagaagctcggctggtggaggatattggacacgaattaacctacgtgctg
ccctacgaagctgccaaggaaggggcatttgtagaactcttccatgaaattgatgatcga
ctctctgacctgggcatttcgagttatggaatctcagagactacgctggaggagatattt
cttaaagtggctgaagacagtggagtagatgcagaaacatcagatggaaccttacctgca
agaaggaacagacgtgcctttggagaccgacagagctgtctgcgcccattcactgaagat
gatgcttttgatcccaatgactcagatgtggatccagaatctcgagagacagatctactc
agtggcatggatggtaaaggctcctatcaggtgaagggttggaaactcacccaacagcag
tttgtggcccttttgtggaagaggtggctgattgccaggcgaagcaggaagggatttttt
gctcagattgttctgccggcagtatttgtctgcattgcccttgtcttcagtctgattgtt
cctccttttggcaagtaccctagtctggaactacaaccatggatgtacagtgagcaatac
acatttgtcagcaatgatgctcctgaagatgcaggcactcaaaaactcttggatgctctg
accaagagccctggttttggcacccgttgtatggaaggacagtcaaacccacatatttct
tgtgaaggaggtgaggataaatggaccactgcttctgtccctgagtctgtgatggacatc
tttctgaaagggaactggacaatggagaacccttcacctgcctgtgagtgcagtaatgac
aagataaagaaaatgcttcccgtgtgtcctgcaggtgcaggtggattgcctcctccccaa
agaaaacaaaacacatctgatatccttcagaacttgactggaagaaacatatctgactat
ctggtgaagacctatgtccagatcatagcaaaaagcttaaagaacaagatgtgggtaaat
gagtttaggtatggcggcttttcgttgggtaccagtagcattcatggattgcctccgagt
aacgaagttaatgctgctattgaccaagtgaagaaactgttcgagctgacaaaggacagt
tctgcagatcgatttctcaacagcttaggaagctttatgacaggactggacaccaaaaat
aacgtcaaggtgtggttcaataacaagggctggcatgccattggctccttcttgaatgtc
atcaataatgctatcctcagagccaacctgcctgagggagagaaccccagcaactatggc
attactgcttttaaccaccctctgaacctgaccaagcagcagctctccgaagtggctctg
atgactacttcagtagatgtccttgtctccatctgtgtgatctttgccatgtcctttgtc
ccagccagctttgtggtgttcttaatccaggagagagtcagcaaagccaaacatctacaa
ttcatcagtggtgtaaagccagtcatctactggctttccaatttcgtctgggatatgtgc
aactatgtggtacccgccaccttggtgatcatcatcttcatctgcttccagcaaaagtcc
tatgtgtcctccaccaatctgcctgtcctggctcttcttctcttactttatgggtggtca
ataacccctctcatgtacccagcctcctttgtgttcaagattcccagcacagcatatgtg
gtcctcactagtgtgaacctcttcattgggattaatggaagtgtggccacttttgtctta
gaactcttcactaacaacaaattcaacaacattaatgatattttgaaatctgtgttcctg
atatttcctcacttctgtctgggtcgggggctaattgacatggtgaaaaaccaggcaatg
gctgacgcactagaaaggtttggtgaaaaccgttttgtgtctccactctcctgggacttg
gtgggaaggaacctctttgccatggccgtggaaggagtggtcttcttcctcatcacagta
ctgatccagtacaggtttttcatcaagcccagacctataattgcaaaacttcccccttta
aatgatgaggatgaagatgtgaagagggagaggcagaggattttggatggtggaggacag
aatgatattctagaaatcaaagaactaaccaaggtatatagaagcaagaggaaacctgca
gttgacaggatctgtgttggcatccctcctggagagtgttttgggcttttgggagtgaat
ggtgctggaaaatcatcaacttttaagatgctaactggagatactactgtgacaaaagga
gatgcttttctcaataaaaacagtatcttgtcagacatccatgaagtacatcagaacatg
ggctattgcccccagtttgatgctatcactgaactgttgacaggaagagagcacgtggaa
ttctttgcactcttgagaggtgtccctgagaaagaagttggcaaggttggtgactgggca
atccgaaaactgggccttgtgaaatatggagaaaagtatgctgggaattacagtggtggc
aacaagcgaaaactttcaacagctattgctttgattggaggccctccagtggtgtttttg
gatgaaccaaccactggcatggatcccaaagcccgccggttcttatggaattgtgcccta
agtgtaatcaaagagggaaggtctgtggtgcttacctctcacagcatggaagaatgtgaa
gctctctgtaccagaatggcaatcatggtcaatgggaggttccgttgtcttggcagtgtc
caacacttaaagaacaggtttggagatggttatacaatagtcgtacggatagcaggctct
aatcctgacctgaagcctgttcaggaattctttggcctggcctttccaggaagcgtcctc
aaagagaagcaccgcaacatgctgcaataccagctcccatcttccctgtcttccctagcc
aggatattcagcatcctttcccagaacaaaaagagattccacatagaagattattctgtt
tctcagacaacacttgaccaagtatttgtaaactttgcaaaggaccaaagtgacgatgac
cacttaaaggacctgtcattacacaaaaaccaaactgttgtagatgtcgcatttctcaaa
tcttttctgcaagatgagaaagtgagagaaagctatgtctaa
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integrated database retrieval system
