Gracilinanus agilis (agile gracile opossum): 123249046
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Entry
123249046 CDS
T07702
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123249046 (VPS13A)
Membrane trafficking [BR:
gas04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
123249046 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
123249046
NCBI-ProteinID:
XP_044533949
LinkDB
All DBs
Position
1:154151840..154489619
Genome browser
AA seq
3161 aa
AA seq
DB search
MVFESIVVDVLNRFLGDYVVNLDTSQLTLGIWRGVVALKNLEIKENALSELNIPFKVKSG
SIGKLDLVIPWTNLYTEPVKAVLEGIYLLIVPSTLMKYDAEKEEKYLLDLKQNQLKRIEE
AKKKMGNKGKEKKEKQDTFTEKLIAQIIKNLHVKISSIHVRYEDDVTNRKKPLAFGISLQ
NLSMETTDQDWNPCIDHDTEKFFRKLIRLDNLFGYWNVKARMFHQHDSVISLESLKYGII
TDVVPEGYDFVFHPISAQAKLGMNRRTDLDFSSPKINLEVEVHNIGIELNKLQYFSVMEL
LESIDMMTQNLPYRKYRPDVCIHNNAEKWWKYAITGVLKVDIQPRLHVWSWKYICQHRQN
VKQYKELYKRKIKSTKPTDEILKPLQDLEKVLDVFNIILARQQAEVEVKKAGLKIYGESS
EDNKGWFGWLWNWSESNTNEQADTKPASLEEYMTYEEKVKLYEAIGYSETAVDPTLPKTY
EAKKLSLQLGSMSISLRESKKKSELVHILFGDFSTLIIQRPGAQAIKFESKIDTFRVTGS
SFLYLKPCLLSPLDDSSLLFKILFETNPLDGTVAQRCIIEAEPLEIIYDAKTVNDIVQFF
QPPKEVRLAKLTTATLMKLEEFREKTATGLLYIIETQKILDLKIDLKASYVIIPQDGFYT
ATSNLLLLDLGHLKVSSRSQSELPNIEVNVTDIEEIMSRAYDNFDIQLTSIQLLFSTAGN
DWKEARKLPYSDQHILEPLHFNMEFSKAMVVTDLRMPKFKVFGHLPLLSLRISDEKLKGI
LKLVESIPRPQSTTDVYGYKKTSLDYTSSFGTPQISQRLLPLWELQSIMEDESEEEYYDA
PCSPLEDIPCLLFSGHNVRQRKFHRLGATTNWTDCKMKFEIPEVFIQCCRLVENLEQPIM
ELDIVGLGTEIQLRRFDKSANAFLKEICLKCPEYMDEKQKPVYLITTLDNALEDLLTLEY
SKVDSHVPDLKTSYKNVLQLFKINFSSLDIRLHTEALLNIKNFVNSLLPKREVKSHSQIV
ETEEKGGEIIKKLSSKISRSEDVINLNIIADLSCLRIFIEDQRCRISEITIEGFESHVVM
RQTTSEINLNLKNIIILDSDEMAFYKKVLYITGKEVFSLKMISYLGATAGAEYTNMNVVD
REITLTVGCIEVVLIMKFLYSVSAFINNFQRAKEALAEATVQATGIAGGVKELTQRSSRM
ALDIHIKAPVVVIPQSSESTNVLVADFGLITMKNKFILVPNSIYSPPPVIDDITVKLSEM
QLYRSQFVEGQFPDVLVIMQPINLEIAVQRNLSWEWYQEIPAVNLDAQLKPMELILSQED
ITMIVKMLYENIWITDNNQPSVAPVSAESDDLSAQHISGGTTVVTAAVVEMHPQAPRVKT
TINLNFRTDYLTLTLYSPDPKNTSFVDVRDPLLKLAEFKLEQILSGGKMLTDDSVFFSLS
LKHCILEDKQSHIRKATPQMIGLTVGFERKDMMDLRYKRNREGIVFDIILQELYLCASMQ
FLRAVSDVFLTAYYSGIVVETTNVQGWPSKEDMQEKWEMNVLIKNPEIVFVADLSRFDAP
SLVLTTQCEISWKWTPLSDNITAAIKDLQVKACPFLPAKREGKITTVLQPCDLFYQSIQM
GVDPRMVDISVKSLTLKISPIIINTIITITSTFYTTAKVAHRESFPSQPDLWDKMDTKKL
KMWFLEESGDSEKVAAVTELVPTGEMIKMTIDSIFVVLEAGVGHRTIPMLLAKSYFSGEG
KNWSTLINLHCHLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNFGIKIKKKAKKALV
ESDTEEENYKVPEYKTAISFYSKDQLNITLSKCGLVMLNNLGKAFTEAATQTSDIFTKDQ
APFLIFNSLGITITVSMSDSFRALNLPESKMFALKNEESLSMDYIRSNDGDQFSAMTSLS
SKLFYIMLTPANHSTTDKIPLTKGGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTVRSP
VQMRNHFSIPMNIYEGDILLGTALPENEFNIQLTSYRSVLFLRPEGEECGLCDAINFEEI
IKYEGLLLEKHCQPSHSSKKPFIINIVPEKDQLTSLSVYSEDGWDLPYIIHLWPPVLLRN
FLPYKIAYYLEGNELRVFTLEEGSSAQICTAELDKTRLHLKLINYLDQDWKSEYQIRSNQ
HDISFISFRCVTEIEKTELVIAIHLTYNTGQAIVAFHSPYWMVNKTGRMLQYKADGIHRK
HPPDYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIKCKGSTMDYQVG
VTIDLSSFNLTRIVTFTPFYIIKNKSKYHVRVSEEGNEKWISLDLEECIPFWPESSSNKL
LIQVENSEEPPKKIYLNKQENCILLHLGNKLGGIIAEVNIAEHSTFITFMDYHDGSATFL
LINHTKDEIVEYKQSCLIEMEDMLPPGKAVLYTWNDPIGTRKLIWKCGKSRGEVTQKDDM
MTPITLGGKKTIYLVSFFEGLQRILLFTEDPKVFKVTYESEKAELAEQEIVLSLQDVGIS
LVNNYTKQEVAYIGITSSDVVWETKPKKKGRWKTLSIKQTEKLEREFKEYIEVSPCEDKI
IDLEPSVTVCLTPSGSNMKILQPHIIPVRRNYLPAVKLEYSTSAHQTSFRVQIYRIQIQN
QIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLR
LDLGFLYALAELMAEAEVTEQHEVELFHKDIEYFKEGFQTDSLTDTSQVSLYEYFHISPI
KLHLSVSLSSGRDDGKDAAQHGGLIPVHSINLLLKSIGATLTDVQDVVFKLAFFELNYQF
HTTPQLQTEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFFYEPYHGAIQG
PEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQKRREAMNKQPA
GLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGII
DMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVIERGRFAKS
KYITHVMVNKKDFLMVTTSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIIHGRRLRIEAK
ERVRSVFHTKEFGKIVNFKTAEDAKWILSKLEEVREFNPKL
NT seq
9486 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtccatagtcgtggacgtgttgaatcggttcttgggggattatgtggtg
aacctggacacttcccagctaactctgggcatctggagaggagttgtagcccttaagaat
cttgaaattaaagaaaatgcattgagtgaactgaatataccatttaaagtcaaatctgga
tctataggtaaacttgatcttgtgattccttggacaaacctttacactgagccagtcaag
gcagtattggaaggaatttatttactcatagtgccttcaacccttatgaagtatgatgca
gaaaaagaagagaaatatctcttagatttaaagcagaatcaattaaagagaatagaagag
gcaaaaaagaaaatgggaaataaaggtaaggaaaagaaagagaaacaggatactttcaca
gaaaagctaatcgcacagataataaaaaatcttcatgtaaaaatttccagtatccatgtc
cgatatgaagatgatgttacaaatcgaaaaaaaccattggcatttgggatatctcttcag
aatctcagcatggagacaactgatcaagattggaatccatgtatagatcatgacactgag
aaattctttcgtaagctaatacgtttagataacctgtttggctattggaatgtgaaagct
aggatgtttcatcaacatgattctgttatatctttggaaagcttaaagtatggaatcatc
acagatgttgtcccagaaggttatgattttgtattccatcccatttctgctcaagccaaa
ctgggtatgaatcgccgaacagatttagatttttcttcaccaaaaattaatttggaggtt
gaggtacataacataggcatcgaattgaacaaattacagtatttcagtgtcatggagctc
cttgaatcaattgacatgatgactcaaaacttgccatataggaaatataggcctgatgta
tgtattcacaacaatgctgaaaaatggtggaaatatgcaataaccggtgttcttaaagta
gatatccagcccaggctgcacgtgtggtcatggaagtacatttgccaacacaggcaaaat
gtaaagcagtataaggagctttataagagaaagataaaaagtacgaagccaactgatgaa
atcctaaaacctttgcaggatttggaaaaagtattggatgtgtttaacattattttggca
agacaacaagcagaagttgaggtaaagaaagctggactcaaaatttatggagaatcttca
gaggataataaaggctggtttggttggttgtggaattggtcagaatcgaacactaatgag
caagcagatactaaacctgcaagtcttgaagaatatatgacatatgaagagaaggttaaa
ctctatgaagcaattggttatagtgaaactgccgttgatcctacattgcccaaaacatat
gaagccaaaaaattgtctctgcaattgggaagtatgtctatttccttaagggaaagcaag
aaaaaatctgagttggtacatattttatttggtgatttcagcacattgatcatacaacga
ccaggagcacaagcaataaaatttgaaagcaaaatagacacatttcgtgttactggttca
tcatttctttacttaaaaccttgtctcctttctccattggatgattcttctttacttttc
aaaattttgtttgagaccaatccattagatggaactgttgctcagagatgtatcatagaa
gctgagcctttggaaataatatatgatgcaaaaaccgtgaatgatatagtgcaatttttt
caacctccaaaagaagttcgtctggcaaagctaactacagcaactttgatgaaactggaa
gaattccgtgagaagacagcaacaggtttattatatattattgaaacacaaaaaattctt
gatctcaaaattgatttgaaggcatcatacgttattatcccacaagatggattttatact
gccacatcaaatttacttctcttggatcttggccatctaaaggtgtcaagtagaagtcaa
tctgagttaccaaacattgaagtaaacgtgactgatattgaagagattatgtctagagct
tatgataattttgatattcagcttactagcatacagctactttttagcacagctggtaat
gattggaaagaagctcgaaaactcccgtattctgatcagcatatcttggagccattgcat
tttaatatggaattttccaaggccatggttgtcacagatctgagaatgcctaaattcaaa
gttttcggacatctgcctctgctttctttgcgaatttcagatgaaaaattaaaagggatt
ttgaaattagttgaaagcattccaaggccacaaagtacaactgatgtatatggctataaa
aaaacttctctggattatacatcttcttttggaacaccacagatttcccaaaggctgctt
cctctctgggaacttcaatccattatggaagatgaatcagaagaggaatattatgatgct
ccttgtagtccactagaagatattccatgtttgttgttttctggtcacaatgttcgacaa
agaaaatttcatagactaggagcaactacaaactggactgactgtaaaatgaaatttgag
atacctgaggtttttattcaatgttgtcgtcttgttgaaaatttggagcagcctataatg
gaactagatattgtcggattaggtacagagattcaattaagaagatttgataagagtgca
aatgctttcctgaaggaaatctgcctaaaatgtccagagtacatggatgaaaaacaaaaa
ccagtataccttattacaacactggataatgcattagaagatctgttaacactggaatat
agtaaggttgattcacatgtaccagaccttaaaacttcctataagaatgttttacagctg
ttcaagataaatttttcttctttggatattcgtttgcatactgaagcacttttgaatatt
aaaaattttgtgaatagtcttcttccaaaaagagaagtaaaatcacatagtcaaattgtg
gaaactgaagaaaaaggaggagaaataattaagaaattatcttctaagatatctaggagt
gaagatgtcattaacctaaatatcattgctgacctgtcttgcttacgcatctttattgaa
gatcaaagatgtagaatttctgaaattaccattgaaggctttgagtcccacgtggtaatg
agacagaccacaagtgaaataaatttaaatctgaagaatataattattttggattctgat
gaaatggccttctataaaaaggtgctttatataactggaaaagaggtcttcagtttgaaa
atgatttcttatcttggtgctactgctggtgctgaatatacaaatatgaatgtagttgac
agggagattactctaactgttggctgcattgaagttgttttaataatgaaatttctatat
tctgtatcggcttttataaacaactttcaaagagcaaaagaagctttggctgaagcaacg
gttcaagcaacaggtatagctggtggtgtaaaagaactgacacaaagaagttcccgaatg
gcattggatattcacatcaaagcacctgttgtagtcataccacagtcatcagaatccaca
aatgtcttagttgctgattttgggctaattacaatgaagaacaagttcatcttagtgcca
aacagcatttattcccctccaccagttattgatgatataacagtaaagctgagtgagatg
caactctacaggtcccaatttgttgaaggccaatttcctgatgtactagttataatgcaa
ccaataaatcttgagattgctgttcaacgaaacctgtcttgggagtggtaccaagaaatt
cctgctgtgaaccttgatgcccagcttaaacctatggagcttattctaagtcaagaagac
attactatgatagtaaaaatgttgtatgaaaatatatggattacagataataatcagcct
tcagtagctccagtctctgcagagtctgatgatctatcagctcaacacatttcaggagga
acaactgtagtgacagcagctgtggtagaaatgcatccacaagcaccacgtgtcaagact
acaataaatctaaatttcagaactgactatttgactctaactttgtatagcccagatcct
aaaaatacttcctttgtagatgttcgagatccgcttttgaaacttgcagaatttaaactg
gaacagattctaagtggtgggaaaatgcttacagatgactcagtatttttttcattgtcc
ttaaaacactgcatattagaagataaacagagccatattcggaaggcaactccacaaatg
attggactgacagttggctttgaaagaaaggatatgatggatttaagatacaaacgaaac
agagagggtattgtattcgatataattttgcaagaactgtatctctgtgcaagtatgcaa
ttcctgagggcagtttcagatgtctttcttacagcctattatagcggtattgttgtagag
actactaatgttcaaggatggccctcaaaagaagatatgcaagagaaatgggaaatgaat
gttttgattaaaaatcctgaaattgtgtttgtggctgatttgtcaagatttgatgctcca
tcattagttcttaccacacaatgtgaaatcagttggaaatggacacctctgtcagataat
ataacggctgcaattaaagatctccaagtgaaagcatgtccatttcttccagcaaagaga
gaaggcaaaatcactacggttttgcagccatgtgacttgttttatcaaagtattcaaatg
ggtgtagatccaaggatggttgatatatctgtaaaatccttgacactcaagatttcacct
attattataaataccataattactattacatcaacattttatacaactgcaaaagttgca
catcgagaatcatttccatctcaaccagatttatgggacaaaatggatacaaagaaactg
aaaatgtggtttcttgaagagtcaggtgatagtgaaaaggtggctgcagtgacagagttg
gttcccactggagagatgataaaaatgacaattgactcaatttttgttgttcttgaagct
ggagttggtcatagaacaataccaatgcttttggctaagtcatatttttcaggggaaggc
aaaaactggagcactcttatcaatcttcattgtcatcttgagttagaagtacattactac
aatgaaatgtttggtgtatgggaacctttacttgaacctttagaaattgatcaaactgaa
gattttagaccatggaattttggaataaagattaaaaagaaagcaaagaaagccttggtt
gaatcagatactgaggaagaaaactacaaagtgccagagtacaaaacagcaattagtttc
tattcaaaagaccagttgaatattacattatcaaaatgtggccttgtaatgctgaataat
ttaggaaaggcatttacagaagctgctactcagacttcagatatcttcacaaaggatcaa
gcaccatttcttattttcaattctcttggaattaccatcactgtttcaatgagcgattcc
tttcgtgctcttaatcttcctgagtcaaaaatgtttgcattaaaaaatgaagagagctta
agtatggattatatcagaagtaatgatggtgatcagtttagtgcaatgaccagcctaagt
agcaaacttttttacattatgctcacacctgctaaccattcaactactgataagattcct
ttaacaaaaggaggtcgacgtctgtatactgttagacacagagaatctggtgttgaaaga
tctattgtttgccaaattgatacggttgaaggcagtaagaaggttacagttcgatcccca
gtgcagatgcgaaatcatttctcaattccaatgaatatttacgaaggtgacatattgttg
ggaactgctttaccagaaaatgagttcaacatacaattgacatcttatcgatcagtcctt
tttttgagaccagaaggggaagaatgtgggctatgtgatgcaatcaactttgaagaaatt
ataaaatatgaaggactcctcctagaaaaacattgtcaaccttcacactcttctaagaaa
ccatttatcattaatattgtacctgaaaaagatcaattgacatcactgtcggtgtattca
gaggatggatgggatttaccatacataattcatctgtggcctcctgttcttctccgcaat
tttcttccttataaaattgcttattatttagagggaaatgaacttagagttttcacccta
gaggagggttcttcagcccagatctgtactgcagaattggataaaactagactacattta
aagttaattaattatcttgaccaggattggaaaagtgaatatcaaataaggtctaatcaa
cacgacatcagttttattagttttagatgtgtcactgagatagagaagacagaattagtt
attgccattcacttgacttataatactggccaggcaattgtagcatttcacagcccttat
tggatggtgaataaaactggtcggatgctacaatacaaagcggatgggattcatcgtaag
catcctccagattacaaaaagccagtactcttttctttccagcctaaacacttttttaat
aataacaaggtgcagcttatggtgactgatagtgaattatcagaccagttttcaattgat
actgtaggcagtcatggagcgattaaatgtaaaggttcaacaatggactatcaagttggt
gtaaccatagacctgagtagttttaatcttaccagaattgtaacattcactcctttttat
ataataaaaaacaaaagtaaataccatgtaagagtatcagaagagggaaatgaaaaatgg
atctctcttgatttggaggagtgtatccccttttggcctgaaagttcttctaataaactg
ctgattcaagttgaaaacagtgaagagcctccaaaaaagatatatttgaacaagcaagaa
aattgcattttactgcacctcggcaacaaacttggaggaattatagcagaagtgaatata
gctgaacattctacatttattacatttatggattatcatgatggatctgctacattcctt
ttaataaatcacaccaaggatgagattgttgaatataaacaaagttgtctcattgaaatg
gaagacatgcttcctcctggtaaagcagttttatacacttggaatgatcccataggtact
agaaaattgatctggaaatgtggaaagagccgtggtgaagtaacgcaaaaagatgacatg
atgacaccaataactttgggtgggaaaaagaccatttatttagtttcattctttgaaggc
ttgcagcgcattcttttattcactgaagatcctaaagtatttaaagtgacatatgaaagt
gaaaaagctgagttggcagagcaagaaattgtgttgtcattacaagatgttggaatttct
ttggttaataactatacaaaacaagaagtagcctatattggcatcacaagctcggatgta
gtttgggaaacaaaaccaaaaaagaaaggaagatggaaaacactaagtataaagcaaact
gaaaaattagagagagaatttaaagaatacattgaggtttcaccttgcgaagataagatt
atagatttggaaccttctgttacggtttgtttaacacctagtggtagtaatatgaaaatt
ctacaaccacatataatacctgtacgaagaaattatctgccagcagtaaaattagaatat
agtacatctgcacatcaaacatctttcagagttcaaatttataggatacagatacaaaat
cagattcatggagctatatttccctttgtattttatcctattaaacctcccaagtcagtc
accatggactcagcaccgaagccatttacagatgtaagtattgtgatgagatctgctgga
cattcacaaatatcacgtattaagtattttaaagtattgatacaagaaatggacctcagg
ttagatcttggatttctttatgctctggcagaactcatggcagaagctgaggtgactgaa
caacacgaggttgaacttttccacaaggatattgagtattttaaagaaggatttcagaca
gactcattaacagatacatcacaagtcagcctttatgaatattttcatatttctcctatc
aagttacacttgagtgtttcactgagttcgggtagagatgatggtaaagatgcagcacaa
catggaggactgattccagtccattcaataaacctcctgctgaagagtatcggtgccact
cttacagatgtgcaagatgtagtatttaagctagcattttttgaacttaactatcagttc
catacaacaccccaattacagactgaagttataagacactactcaaaacaggccattaag
cagatgtatgttcttattcttgggcttgaagttttaggaaatccatttggcttaattcga
gaattttctgaaggagtagaagcatttttctatgaaccgtatcatggagccatccaaggt
cctgaggaatttgtagagggtatggcattaggacttaaagcgttagttggaggagctgtt
ggtggactggcaggtgctgcctctaaaattactaatgctatggctaaaggtgttgctgcc
atgactatggatgaagattaccagcagaagagaagagaagccatgaataaacaacctgca
ggtcttagagaaggcatcacacgtggaggaaaaggcttagtatctggttttgtaagtggc
ataacaggaatagtgactaagccaatcaaaggagcccaaaaagaaggagcagcagggttc
tttaagggtgttgggaaaggattagttggagctgtggcaagaccaacaggaggaattatt
gatatggctagtagcacctttcagggaattaaaagagctactgagacttctgatgaagta
gagagtcttcgtcctccaagattctttaatgaagatggcgttattagaccttacaggttg
agggatggaactggaaatcagatgttacaggtgatagaaagaggaagatttgccaaaagc
aagtatattacacatgttatggtcaataaaaaagatttcttgatggtaaccacaagtggt
gtactgtttgtgacaaaaggaacatttgggcagctgacctgtgagtggcaatacagtttt
gatgagtttaccaaagagccatttatcattcatggaagacgattacgtattgaggccaag
gaacgcgtacggtctgtattccataccaaagagtttgggaaaatagttaattttaagact
gcagaagatgctaagtggatcctttcaaagctggaagaagtgagagagttcaacccaaag
ctctaa
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integrated database retrieval system
