Gracilinanus agilis (agile gracile opossum): 123249175
Help
Entry
123249175 CDS
T07702
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123249175 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
123249175 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123249175 (LSM8)
03041 Spliceosome [BR:
gas03041
]
123249175 (LSM8)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123249175 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
123249175 (LSM8)
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123249175 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
123249175
NCBI-ProteinID:
XP_044534101
LinkDB
All DBs
Position
5:complement(98612468..98619499)
Genome browser
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggcattggagaactacatcaaccgtacagttgctgtaattacatctgatggc
agaatgattgtgggaacactaaaaggttttgatcagaccattaatttgattttggatgaa
agccatgaacgagtattcagctcttctcagggagtagagcaagtggtattaggattatac
attgtcagaggtgataatgttgcagtcattggagaaattgatgaagagacagattctgca
cttgatttgggtaatattcgagcagaacctctgaactcagtagcacactga
DBGET
integrated database retrieval system
