Gracilinanus agilis (agile gracile opossum): 123249268
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Entry
123249268 CDS
T07702
Symbol
SMC1B
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04110
Cell cycle
gas04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123249268 (SMC1B)
04114 Oocyte meiosis
123249268 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123249268 (SMC1B)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123249268 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
123249268 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
123249268
NCBI-ProteinID:
XP_044534181
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Position
5:complement(299269805..299330221)
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AA seq
1309 aa
AA seq
DB search
MGRLDRLLVENFKSWRGRQILGPFRGFTCIVGPNGSGKSNVMDALSFVMGERTSNLRVKS
LQELIHGAHVGRPSATTASVLAVYVEDNGEEKTFRRTIRGGSSEFHFNDNPISRSAYTAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISNSKELIDEYEKKKKKVQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEADRYQALLEDLKEKKVQLQLFQLYHNEKRIQFLSS
ELDEMNKEMTLTKESLSDEENIVKTRKKELGRLTRELQQMEKEMKALEAVLNQKRPQYIK
AKENTSHHLKKLETAKKAIRISEKQCTKQEDDIQALEKELWDLDRTWRNFEKQVEEERLR
RGRDIELEASQLDQYKELKEQVIKKVATMTQQLEKLQWEQRADEERLAFGDRRRAEVQGN
LKQVKEQVEDHNKRIEKLEEYTSTCIDCLKEKTQQEEALFEELEQSRVRMAEVNSELSRI
GGELQNAHIDHHESKRQQKKAEVLEFLKRLYPESVYGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVVSEKVARDCIRFLKEERAEPETFLALDYLDIKPINERLREMKGSKMVIDVVQT
QLPQLKKVIQFVCGNGLVCETVEEARHMAFDGPERLKTVALDGTLFLKSGVISGGSSDLK
LKARCWDEKEINKLKERRDQLIRELKDLMKIRRKETDLKQIQALVQGTHTRLKYSQNELE
TIKKKHLARFNKEQSQLQSELLNIESQYVMLSDGIEKRIRQITDFQEKIDKVEDEIFHDF
CEEIGVENIREYENQQVKQQQEIDKKRLEFEKLKTRLNIQLEYSHNQLKKKTNKVTTLKE
AIVKDTEDLESLKKVEENCLQVVDDLMAKRQQLKDVCVAQNASIEKAQGQVEEARKKFLI
SNREVGKMQKEMAAVQTALEQQRLEKHNILLSCKVQDIEVTLVAGSLDETIQVALGEQAE
STQSTVAAMYEREGALQIDYSSLGEDLKDLQSDKEIKAQLGLLEQQLATHEDILLKTTAP
NLRALQNLQNVRDKFQESIDAFEASRKEARVCRQEFEQVKKKRYDLFSQCFEHVSVSIDQ
IYKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFA
VHSFRPAPFFVLDEVDAALDNTNIGKVSSYIREQTREQFQMIIISLKEEFYSKADALVGI
YPETVTPGNIAAGAETTARGSPRAPPPPPPPGLGLLEAPDTHPGGRSRFEFILKDGKSHQ
GLLVYLQEICRCLLGERGRKSSSPLTLFDLFIENKCSCRISFYSSFYKM
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcctggaccggctgctcgtggagaacttcaagtcgtggcgcggccgccagatc
ctcgggccctttcgcggcttcacctgcatcgtcggccccaacggctccggaaagtcaaac
gtgatggatgcgctgagcttcgtgatgggtgaaaggacaagcaacctgcgtgtgaagagc
ctgcaggagctgatccatggcgctcatgtgggccgcccctccgccaccacggccagcgta
ctggcagtatatgtggaggacaatggcgaggaaaagacgttccgaaggaccatccgggga
gggtcatcagaatttcattttaatgataatcctatcagtcgttctgcctacacagctgag
ttggaaaaaattggcatcattgtcaaagctaggaattgcctcgtttttcagggcactgta
gaatctatttcaatgaaaaagcccaaagagagaactcagttttttgaagaaattagtaat
tcaaaagagcttattgatgaatatgagaaaaagaagaaaaaggtacagaaagctgaagag
gatgcccaatttaattttaataagaaaaaaaatgtggctgctgaacgcaaacatgccaaa
ttagagaaagaagaggctgaccgctaccaggccctcctcgaggacctgaaagagaagaaa
gtccagctacagcttttccagctttaccacaatgagaaaagaattcagtttctgtcaagt
gaattagatgaaatgaacaaggagatgactctcaccaaagaatccctttctgatgaggaa
aacatagtgaagaccaggaaaaaagagctgggcaggttaaccagagaactgcagcagatg
gagaaggagatgaaagctcttgaagctgtgctgaaccagaagaggccccagtatatcaag
gccaaagaaaatacatcacaccacctcaagaagctagagactgccaagaaggccatcagg
atcagcgagaagcagtgcaccaagcaagaagatgacatccaagctctggaaaaagaactg
tgggacttagacaggacatggaggaattttgaaaagcaggtcgaagaagagaggctgcgt
cgtgggagggacatcgagttggaagccagtcagctggatcagtacaaggagctcaaggaa
caagtgatcaagaaagtggcaaccatgacccagcagctggaaaagctgcagtgggagcaa
agggcagatgaggaaagactggcatttggggacaggaggcgagcagaagtccagggaaat
ttaaagcaagtaaaggaacaggtagaggaccataataagcgcatcgagaagttggaggag
tataccagcacatgcattgattgtttgaaagagaagacacaacaagaagaagcccttttt
gaggaacttgagcagtctagggtccgaatggctgaagtaaacagcgaattgagtcgtatt
ggaggggaattacaaaatgcacacattgatcaccatgagagcaagcggcaacaaaagaaa
gctgaagttctggagttcctgaaaaggctttaccctgagtctgtgtatggcagactcctt
gatttatgtcatcctattcataagaaataccagcttgctgtgaccaagctctttggcaga
tacatggtggctattgttgtagtttccgaaaaagtagcaagagattgcatccgattcctg
aaagaggaaagagctgaacctgagacgttccttgctctggattaccttgatatcaagccc
atcaatgagaggctgagagagatgaaaggctccaagatggtaatagacgtcgtgcagaca
cagcttccacagctaaagaaagtcattcagtttgtgtgtggcaatgggcttgtgtgtgag
actgtagaagaagcccggcacatggcctttgatgggcctgagcggctgaagacggtggct
cttgatggaacattgtttttgaaatctggagtaatatctggaggatcaagtgacttaaaa
ctcaaagcgaggtgctgggatgaaaaggaaataaataagctcaaggagagacgagaccag
ctcatcagggagttaaaggacttaatgaaaatacgacgcaaagaaacagatttgaaacaa
atccaggctttggtacaaggaactcacacacgactcaaatactctcaaaatgaactggag
acaattaaaaagaagcatcttgctcgttttaacaaggaacagtcccaactgcaaagtgaa
ttactgaacattgaatctcagtacgtgatgctgagtgatggcatcgagaaaagaatccga
caaatcacagattttcaagaaaagatagataaggtggaagatgaaattttccatgacttt
tgtgaagaaattggcgtagaaaatattcgcgaatatgaaaaccagcaagtgaaacagcag
caggaaattgacaaaaagaggcttgagtttgagaaactgaagactcggctcaacattcaa
ctggaatatagccataatcaactgaagaagaaaaccaataaggtcacaaccctgaaagaa
gccattgtcaaagatacagaagaccttgagagtctgaagaaggtggaagaaaactgcctg
caagttgtggatgacctcatggccaaacgacagcagctaaaggatgtgtgtgttgctcag
aacgctagcattgaaaaggcacagggccaggtggaggaagcgcgcaagaaatttttgatc
agcaacagggaggtggggaagatgcagaaggagatggcagctgtccagacggccctagaa
cagcagcggctggagaagcacaacattctgctgagctgcaaggtgcaggacatcgaggtc
actcttgtggccggctccctggacgagactatccaagtggcgctcggagagcaagctgag
agcacacagagcacagtggcagccatgtatgagagagaaggggccctacagatagactac
agcagccttggggaagatctgaaggatctgcagtctgataaggagatcaaggctcagctg
gggctcctcgagcagcagctggccacacatgaggatattctcctgaagaccactgccccc
aaccttcgggccctgcagaacctgcagaatgtcagagacaagttccaggagtccatcgat
gcttttgaggccagcaggaaggaggcacgggtctgtaggcaggagtttgaacaagtaaag
aagaaacgatatgacctcttcagccagtgctttgagcacgtctcagtgtccattgatcag
atctacaaaaagctgtgcaggaacaacagtgcccaggcctttctgagcccagagaacccg
gaagagccttatctggaagggatcagctacaactgtgtggctcctgggaagcgtttcatg
cccatggacaacttgtcagggggagagaagtgcgtggcggcattggccctcctctttgct
gtgcacagcttccgcccagcgccattctttgtccttgatgaagtagacgcagccttggac
aacacaaacattggcaaagtgtccagctacatcagggagcagacccgagagcagtttcag
atgatcatcatttccctcaaggaggagttctactccaaagcagatgctctggtcggcatc
taccccgagacagtgacacccgggaacatcgcagcaggcgccgagacaaccgctcgaggt
tcacctagggctcccccacccccacccccccccggcctagggcttctggaggcccctgac
acacacccagggggacgttccaggtttgagttcattctgaaagatggcaaaagccatcag
ggtctgttggtctatttacaagagatatgtaggtgcctcctcggtgagagagggaggaaa
tcgagttcacctctgacattgtttgatctgttcatagaaaataaatgttcttgcagaatt
tcattctatagctcattttataaaatgtga
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