Gracilinanus agilis (agile gracile opossum): 123249621
Help
Entry
123249621 CDS
T07702
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04120
Ubiquitin mediated proteolysis
gas04137
Mitophagy - animal
gas04144
Endocytosis
gas04340
Hedgehog signaling pathway
gas04350
TGF-beta signaling pathway
gas04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123249621 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
123249621 (SMURF1)
04350 TGF-beta signaling pathway
123249621 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123249621 (SMURF1)
04137 Mitophagy - animal
123249621 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
123249621 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123249621 (SMURF1)
04121 Ubiquitin system [BR:
gas04121
]
123249621 (SMURF1)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123249621 (SMURF1)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123249621 (SMURF1)
Membrane trafficking [BR:
gas04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123249621 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
123249621 (SMURF1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
HECT type E3
123249621 (SMURF1)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123249621 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
123249621
NCBI-ProteinID:
XP_044534668
LinkDB
All DBs
Position
1:204210156..204327568
Genome browser
AA seq
883 aa
AA seq
DB search
MEYGWSGTEDRAEKASGKAEKATPPLKKQSKIGLLGIIGVSTNIPSIYLEHYRNEPYCRR
HLRFPSGIRSGRPDRRFGHSLLILPLSQMQPISLNTCAGKKGRNPIPSSRIRGDLQHGVE
IAPSPPPPRGATSGATVASPPHVRGTQARTHGLGGEKPNGRGSAPWGRDKAAAGVLCAKN
LAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHK
KIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIG
TGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDSTGAAGGGNCRFVESPSQDQ
RLQAQRLRNPEVRGHIQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDP
RIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKE
PSQPLSVPNEGSLEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEE
SYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIY
MLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESV
DPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLY
VNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKH
CMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGPRLFTIHLIDA
NTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgggtggtctgggacagaggaccgggcagagaaggctagcggaaaagcagag
aaagcaactcctccccttaaaaaacaaagcaaaataggattactggggattataggtgtg
tctaccaatatacctagtatttacttggaacactatagaaacgagccctattgtcgtcgt
catctccgcttccccagtggcattcggtcggggcgcccggacaggcgcttcggccattcg
ctgctgatcttgccactttctcagatgcagccgataagtctcaacacgtgcgccggtaaa
aaagggagaaatcccattccctcttccaggatacgaggagacctgcaacatggcgtcgaa
atagccccttccccgcctccacctcggggagcgacgtcaggggcgaccgttgcgtctccg
cctcacgttcggggcacgcaagcacgcacgcacgggctgggaggggagaaaccgaacggc
cgcgggagcgcgccctgggggagggataaggctgccgctggggtactttgtgccaagaat
cttgcaaagaaagacttcttcagacttcctgatccctttgcaaaaatagttgttgatggg
tctggtcagtgccattcaactgacactgtgaaaaatacattggatcctaagtggaatcag
cattatgatctatatgttggaaaaactgattctataaccattagtgtgtggaaccacaag
aaaatccacaagaaacagggagctggcttcctggggtgtgtgcgtcttctctccaatgcc
atcagcagattaaaagatactggataccagcgtttggatctatgcaaactaaaccccaca
gatactgatgcagttcgtggccaaatagtggtcagtttacagactcgagacagaataggc
actggaggctctgttgtggactgcagaggactcttagaaaatgaaggaacggtatatgaa
gactcgggtcctggaaggccacttagctgctttatggaggaaccagccccatatacagac
agtactggtgctgctggtggaggaaattgcagatttgtggaatctccaagccaggatcaa
agacttcaggcacagagacttcgaaacccagaggtccgaggtcatatccagacccctcag
aaccgaccacatggccaccaatcccctgacctacctgaaggctatgaacaaagaacaaca
gtccaaggacaggtttactttttgcacacacagactggcgtgagcacatggcatgaccct
agaataccaagagaccttaacagtgtgaattgtgatgaacttggacccctaccaccaggc
tgggaggttagaagtacagtttctgggagaatatattttgtagatcacaataaccggaca
acccagttcacagatccaagattacatcatattatgaatcaccaatgccaactaaaggaa
cccagccagcctttatcagtgccgaatgaagggtcattagaagatgaagagcttcctgct
cagagatatgagagagatttagtacagaaattaaaagtccttagacatgaactttctctt
caacagccccaagctggccattgtcgcatagaagtatccagagaagaaatatttgaggaa
tcttaccgtcagataatgaagatgagaccaaaagacttgaaaaagaggttaatggtgaaa
ttccgtggtgaagaaggcctagattatggtggagtggcccgggagtggctctatttattg
tgccatgaaatgttgaatccatattatggactcttccagtattctacagataatatttac
atgctgcaaatcaatccagactcttcaatcaaccctgatcatttgtcttattttcacttt
gttggtcggataatgggtctggctgtgttccatggacactacatcaatggaggtttcaca
gttcctttctacaaacagctgctgggaaaacccattcagctatcagatttggaatcagtt
gaccccgagctacacaagagcttagtttggattttagagaatgacatcactcctgtgttg
gatcatactttctgtgtagaacataatgcttttgggaggattcttcagcatgagctcaaa
ccaaatggtagaaatgttcctgttacagaggagaacaagaaagaatatgtccggttgtat
gtaaattggaggtttatgagaggaatcgaggctcagttcctagcacttcagaaaggattt
aatgagctcatcccccaacacttactaaagccttttgaccagaaggagcttgagctcata
ataggaggcctggataaaatagatctgaatgattggaagtcaaatacccgtctcaagcat
tgcatggcagacagcaatattgtaaagtggttctggcaggcggtcgagacattcgatgaa
gaaaggagagccaggttgttgcagtttgtcactggttcaacacgagttcctcttcaaggc
ttcaaagctttacaaggcgcggcaggacccaggctatttaccatccacttgatagatgca
aatacagacaaccttcctaaggctcacacctgctttaatcggattgacattccgccttat
gagtcttatgaaaagctttacgagaagctgctgacagctgtagaagagacttgtgggttt
gccgtggagtga
DBGET
integrated database retrieval system
