Gracilinanus agilis (agile gracile opossum): 123249778
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Entry
123249778 CDS
T07702
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123249778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gas03032
]
123249778
03400 DNA repair and recombination proteins [BR:
gas03400
]
123249778
DNA replication proteins [BR:
gas03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
123249778
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123249778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
ECT2_BRCT0
ATP-synt_ab_N
Motif
Other DBs
NCBI-GeneID:
123249778
NCBI-ProteinID:
XP_044534834
LinkDB
All DBs
Position
5:complement(42830303..42893131)
Genome browser
AA seq
825 aa
AA seq
DB search
MAQENKDPCVKFVAARGNTQLFFAAFESMKEYLSEECLQALTKEEALNIKENDTALYVFE
PFRGVAFDHLQKIGCRIIGPQVIIFCIQHRQCIPKSEYPVYNMIMADIIISCTSLDKAAK
EEMHKYVQMMGGRFCRDLNVAVTHLIAGAVGSKKYLVAASLGIPIMLPSWIKELWRKSQE
NCMTQFSDINMEDFKCPLFFGCTICVSGLCTPEKRAIQQLTTDRGGRYMGHLKMKECTHL
IVQEPRGEKYEYAKRWNIHCVALEWFYHSIEKGFCQDEAMYRTELLSETNSELYTSVILG
QNNEASGNYTVSDFCHISNVHSGYINEFIQNSVMNNKLESLLENLQNLDINAFQAPMDLL
NGCRIYLCGFSDKKLDEDKLRGLISCGGGVCLNQFNEDVTHVIVEDYDDELKQFWTISTH
RPHILEAKWLLECFSKGYLLSEEQYIQLNYQTVEIPLSEQAGMKRNNSFSKIEFRDTEKL
QQADEDLLSQNDNDDMTIDDDEMSEAKIFNDPTHVTLQVENQSSFNPSLLLETLTINESL
FSQKNFLVVGYDDEDESFIASAIKENAGIILPFHSRSIADYVVVPLLGCEMESTVGEVVT
DTWLITCIEQQKFFDPKSNPLFTPIPVLEGSGTPLENCVLSFSQFIGAEKDSLVYLASLL
GARVQEFFVHEDSAEKDILASTHLIVKQPDGSKYQTAQKWGLPTVTMAWILETAKLGKKA
DEYKFMVGNLPKQAVNRPTSPGWEMGMDRKRDLGGTRRGSSHRAAFLASLPPGGGKGSSQ
VGAKIGSGACAGPLKPRWSPHSRASLWIPAQPPQPPPQDVGTSEW
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagagaacaaagatccatgtgtaaagtttgtggcggctcggggaaacactcaa
cttttctttgcagcttttgagtctatgaaagaatacttgtcagaagaatgtcttcaagct
cttacaaaagaagaggcattgaatataaaagagaatgacacagctctttatgtctttgaa
ccatttagaggtgttgcatttgatcatctccaaaagattggctgtagaattattggccca
caagtaatcatattttgcatacagcatcgacagtgtatcccaaaatcagagtatcctgtt
tacaatatgattatggcagatataattatttcttgtacaagtcttgacaaagcagcaaag
gaagaaatgcataagtatgtacaaatgatgggtggacgattttgcagagacttgaatgtg
gcagtaactcaccttattgctggagcagttggcagcaaaaaatatttagtagctgcaagc
ctagggatacctattatgcttccttcttggataaaagagttatggaggaagtcacaagag
aactgcatgacacagttttcagatataaatatggaagatttcaaatgccctttgtttttt
ggctgtacaatctgtgtgagtggtttatgtactccggaaaaaagagcaattcagcaactc
acaactgatcgtggaggtcgatatatgggacatctgaaaatgaaagaatgtacacacctc
attgttcaagagccaagaggtgagaaatatgaatatgctaaaagatggaatatacattgt
gtggcacttgagtggttttatcacagtattgaaaaaggcttctgtcaagatgaagctatg
tacagaacagagcttttatcagaaacaaatagtgagctctatacttcagttattctgggt
cagaacaatgaagctagtggtaattatactgtttcagacttttgtcacatttctaatgtc
cattcaggttacattaatgaatttatacaaaattcagttatgaacaacaaactagaatct
ctacttgagaatctacaaaatttggatatcaatgcatttcaagctcctatggatttacta
aatggctgtcggatatacctttgtgggtttagtgacaaaaagttagatgaagataagttg
agaggacttatcagttgtggtggtggagtttgccttaatcagttcaatgaagatgtaaca
catgttattgtggaagattatgatgatgaattaaagcagttttggactatatcaacacac
aggcctcatatactggaagcaaaatggttgttggaatgttttagtaaaggttatctactt
tctgaggagcaatacattcagttgaattaccaaacagtcgagatacccttatcagagcaa
gcaggaatgaaaaggaataacagtttttccaagatagaatttagagatactgagaagctt
cagcaagctgatgaagacctcctctcccaaaatgacaatgacgacatgactatagatgat
gatgagatgtctgaagcaaagatctttaatgatcctactcatgttactttacaagtggag
aatcagtcttcctttaaccccagcttactgcttgagactctgacaatcaatgaaagctta
tttagccagaagaatttcctcgttgtaggttatgatgatgaagatgaatctttcattgcc
agtgctattaaggaaaatgctggaataattctgcccttccatagcagaagtattgctgat
tatgttgtagttcctttactggggtgtgaaatggagtcaactgtaggagaagttgttaca
gatacatggctgattacttgtattgaacaacaaaagttttttgacccaaagtcaaatcca
ctcttcacaccaataccagtattggaaggaagtggtactcctttagaaaactgcgttctt
tcattcagccaatttattggagcagagaaagattctttggtatacttggcaagcttgctt
ggagcaagagttcaagaattctttgtgcatgaggactctgcagagaaagacattcttgcc
agtactcatcttatagtgaaacagccagatggttctaaatatcagaccgcacagaagtgg
ggattacctacagtgactatggcttggatattggaaactgccaagttggggaagaaagca
gatgaatacaagtttatggttggaaatctacccaaacaagccgtaaatcgccccacttcc
cccgggtgggaaatgggaatggatcggaaacgagatctaggaggcacccggagagggtcc
tcccaccgcgccgccttcctggcgtcacttccgccaggtggcggaaaaggaagctctcag
gttggcgcgaaaatcggctctggggcttgcgcggggcctctcaagccgcgctggtcgcct
cattcccgagcctcgctctggattccggcgcagccgccgcagccgccgcctcaggacgtc
gggacctcggagtggtga
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