Gracilinanus agilis (agile gracile opossum): 123250461
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Entry
123250461 CDS
T07702
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04621
NOD-like receptor signaling pathway
gas05132
Salmonella infection
gas05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123250461 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123250461 (NOD1)
05133 Pertussis
123250461 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gas04054
]
123250461 (NOD1)
Pattern recognition receptors [BR:
gas04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123250461 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
RsgA_GTPase
AAA_25
AAA_22
AAA_30
NB-ARC
PIF1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123250461
NCBI-ProteinID:
XP_044535468
LinkDB
All DBs
Position
5:complement(20614072..20649142)
Genome browser
AA seq
942 aa
AA seq
DB search
MESPVLPDGGAPGPPSCMKLLKADRELLVTHVRNVQCLIDNLMANDYFSREDAEIVGACP
TLPDKVRKMLDLVQSKGEEVCEYLLHVLQQIPDAFVDLKPWLAELCFWPSELVRSRVIVN
TDPVSRYTQKLRSEWSRDSKFITSYSQREEMLLADTYTEHIMELVDFQDAALGGVSSLDS
LLADSTGVINQDGETVFVVGDAGVGKSVLLQQLQSTWARSEPGTGPRFFFPFRCRTFGCF
PPAAVLSLRELLFSHSCCPELEPEAVFAFLLRFPATALFTFDGLDELQSDLDLSRLPDVA
SPLQPAPPVALLASLLRGKLLPGAGKVLTARTGVELPRALVRKKVRLRGFGPDQLRAYTR
KVFPELAAQQRVLSQLDASPQLSSLCSVPLFCWIIFRCLRRGLSGGPCPQLPPELPLTLT
DIFLLLAEAHVSRMLPGSPLRSDPQHSQAETFRTGRGLLRALGRLAYWGLARNRFVFGPE
QVAASQLPEGALQLGFLRLVPEPGPLGPQAAYEFLHLTLQAFFAALFLVADDSVGTAKLL
RFFGEGMASRGLWGLRCLSGCDGGKEDPFRNNDHCQFTNLFLCGLLSKAKQGLVQHLVPA
ATLRRKRRALWRHLAASLRSYLKGLPRTQTEDFLQVQAMPTFIWMLRCIYEAQSQRVGRL
AARGICANYIKLTYCNACSADCSALAFVLHHFPKQLALDLDNNNLCDYGVKELRPCFSRL
TVIRLSVNRIADAGARVLCEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPRLTHLK
MGANLLTSEGGKCLALALKKSRSILDIGMWGNKIGDEGAKAFADALRNHPSLANLSLAFN
GISTEGGKSLAQALQQNSSVKIFWLTKNNLDDEAAESLAEMLEVNQTLSDLWLIQNQITA
KGLSRLADALQKNSSILDICLNGNPIKPEEAKAFQRDKRFHF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccagtccttcctgacgggggggccccagggcccccctcctgcatgaagctg
ctcaaggcagaccgagagctgctggtcacccacgtccggaatgtccagtgtctgatcgac
aacttgatggccaacgactatttctctagggaagacgccgagatcgtgggggcctgcccc
acgctgccagacaaggtccggaagatgctggacctggtccagagcaaaggggaagaagtg
tgcgagtatctcctccacgtgctgcagcagatcccggacgcgttcgtcgatctgaagccg
tggctggccgagctctgcttctggccctccgagctggtgaggagcagagtgattgtcaac
actgaccccgtgagccgctacacgcagaagctgcgctcggagtggagccgggactccaag
ttcatcacgtcgtacagtcagcgggaggagatgctgctggcggacacctacacggagcac
atcatggagctggtggacttccaggacgcggcgctggggggcgtcagcagcctggactcg
ctgctggccgactccacgggcgtcattaaccaggacggggagacggtgttcgtggtgggc
gacgcgggggtgggcaagtcggtgctgctgcagcagctgcagagcacgtgggcgcgcagc
gagcccggcacggggccccgcttcttcttcccgttccgctgccgcacgtttggctgcttc
ccgccggcggcggtgctgagcctgcgggagctgctcttctcccacagttgctgccctgag
ctcgagccagaggccgtgttcgcattcctgctgcgcttcccggccacggcgctcttcact
ttcgacggcctggacgagctgcagtcggacttggatctgagccggctgccggacgtggcg
tccccgctgcagcccgcgccgcccgtggcgctgctggccagcctgctgcggggcaagctg
ctcccgggcgctgggaaggtgctgacggcgcgcacgggcgtggagctgccgcgggccctg
gtgcggaagaaagttcggctgcggggcttcgggccggaccagctgcgcgcctacacgcgg
aaggtcttcccggagctggcggcgcagcagcgggtgctcagccagctggacgccagcccg
cagctgagcagcctgtgctcggtgcccctcttctgctggatcatcttccgctgcctccgt
cgcggcctcagcggcggcccctgcccacagctgcccccagagctgccgctcacgctcacc
gacatcttcctgctcctggctgaggcccacgtcagccgcatgctgcccggcagccccctg
cggagcgaccctcagcacagccaggccgagaccttccgcacaggccgcgggctgctccgt
gccctgggccgcctagcctactggggcctggccaggaaccgcttcgttttcgggcctgag
caagtggccgcctcccagctgccagagggggccctgcagctgggcttcctccggcttgtg
cccgagcccgggcccctcggaccccaggccgcctacgagttcttgcacctcacgctgcag
gccttctttgccgccctcttccttgtggccgacgacagcgtgggcaccgccaagctcctg
aggttcttcggggagggcatggccagcaggggcttgtggggcctccgctgcctcagtggc
tgtgatgggggcaaggaggaccccttccgcaacaacgaccactgccagttcaccaacctc
ttcctgtgcgggctgctgtccaaggccaagcaggggctggtgcaacacctggtgcccgca
gccaccctgcgcaggaagcggcgggcgctctggaggcacctggccgccagcctgcgctcc
tacctgaagggcctgccacgcacccagaccgaagacttcctccaggtgcaggccatgccc
accttcatctggatgctgcgctgcatctacgaggcgcagagccagcgggtgggccggctg
gccgccaggggcatctgcgccaactacatcaagctgacctactgcaacgcctgctcggct
gactgcagcgccctggccttcgtgctccaccacttccccaagcagctggcgctggacctg
gacaacaacaacctctgcgactacggggtcaaggagctccgcccctgcttcagccgcctc
accgtgatcagactcagcgtgaatcggatcgctgacgcgggcgccagggtgctctgcgag
gagctcaccaagtacaagattgtgaccttcttggggttgtacaataaccagatcaccgac
gtgggagccacatacgtggcgaagatcctcgaggagtgcccccgcctcacccacctgaag
atgggtgcaaaccttctcactagtgaaggagggaagtgcctggccttggcccttaagaag
agtcgctccatcctggacattgggatgtggggcaataagataggggacgaaggggccaag
gccttcgcagatgccctgcgcaatcaccccagcctggccaacttgagtctggccttcaat
ggcatctccacggaaggaggcaaaagcctggcccaggccctccagcagaatagctcagtg
aagatattctggttgaccaaaaacaacctggatgacgaagcagcagagagcttggctgag
atgttggaagtcaatcagacgctgagtgatttgtggctcattcagaaccagatcacagcc
aaggggctctcacgcctggcagatgctctccagaaaaactcaagcatcctggatatttgc
ttaaatgggaaccccatcaagcccgaagaggccaaagctttccagcgtgacaagcggttc
catttttga
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