Gracilinanus agilis (agile gracile opossum): 123250528
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Entry
123250528 CDS
T07702
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123250528 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123250528 (CNOT10)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123250528 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_12
TPR_19
TPR_8
ARM_TT21
TPR_16
TPR_7
DUF6058
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
123250528
NCBI-ProteinID:
XP_044535579
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Position
5:complement(22459564..22537620)
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AA seq
805 aa
AA seq
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MKSISSKSIKPWETQSSLCLENQPFLLDQSGKGVQAMNKQSFTISIGNGDFFWRNKDELW
NWMQTHADQGTEKHEGTVSTSGITDQEKELSSNAFQAFMAGNYDMCLQHLACLQDINKDD
YKIVLNTAVAEFCKNEQTTTDHLRATLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQHTEAIAVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNNESGNTTSKEGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREI
KSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNL
GCIHFAMGKHNLGIFYFKKALQENDNVCAQLGAGSTDPGKKFSGRPMCTLLTNKRYELLY
NCGIQLLHIGRPLAAFECLIEAVQVYHSNARLWLRLAECCIAANKGTSEQETKGLPSKKG
IVQSIVGQGYHRKIVLASQSIQNAVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEP
KQENGSKTSNQLGGSGENAESQETCSSKSHDGDKFIPAPPSSPLRKQELENLRCSILACS
AYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENV
TDVSLGISSNEQDQGPDKGENEAMESSGKQTPQCYPSSVNSARTMMLFNLGSAYCLRSEY
DKARKCLHQAASMIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSEIR
KKPVFQSAHPIQPIQMPAFTPGQRK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccattagttcaaagagtatcaagccttgggagacccagagctctctgtgtcta
gagaatcaaccctttttgttagatcaaagtggaaagggtgtccaggcaatgaataaacaa
tcatttaccatatcaattggcaatggggatttcttttggcgaaataaagatgaattgtgg
aattggatgcagactcacgctgatcaaggaacagagaaacatgaaggaacagtttctact
tctgggatcactgaccaagagaaggaattatcaagcaatgcttttcaagcattcatggct
gggaattatgatatgtgcctccagcaccttgcctgcctgcaggacatcaacaaagatgat
tacaagattgttctgaacacggctgtggccgagttctgtaaaaatgagcagacaaccact
gatcatttgagagcaacactcaaccagctgaagaatcaggtccattcagctgttgaagaa
atggatggcttagatgatgtcgaaaatagcatgctctactataatcaagctgttattctc
tatcacctgcgccagcacactgaagcaatagcagttggagagaaactctatcagttcata
gaaccttttgaagagaaatttgcacaggccgtatgtttcttgcttgtggatctttatatt
ctaacttaccaagccgagaaagctctgcatcttcttgctgttctagaaaaaatgatctcc
cagggcaataacaacaagaatgggaaaaataacgagtcaggaaacactacaagcaaagag
ggatcaaatcataaagctgagagtggagccttaatagaagctgcaaagtccaagattcac
cagtataaagtgagagcctatatccagatgaagtctctgaaagcttgcaaaagggaaatc
aaatctgtcatgaatacagctggaaattctgctccttctttgtttcttaaaagcaatttt
gaatatttaaggggcaattatcgaaaagcagtgaaattgttaaatagtgcaaatattgcc
gaacacccaggattcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaacctg
ggctgcattcattttgccatgggcaaacacaatttgggaattttctattttaagaaggct
ctccaagaaaatgacaatgtctgtgctcagctcggggcaggcagcacagaccctgggaag
aagttctcgggaaggcccatgtgtaccctgctgacgaacaaacgctacgagctgctgtac
aattgtgggattcagctgctccacatcggccggccgttggcggcctttgagtgtttgatc
gaagctgtccaggtttaccattccaacgcccgcctttggctgaggctggccgagtgctgc
attgccgccaacaaggggacctcggaacaggagacgaaaggtcttccaagcaaaaagggg
attgtccagtccatcgtgggtcaaggctatcatcgaaagattgtcctggcttcccagtcc
atacagaatgctgtctataatgatggacagtcctccgctattcccgtagccagtatggag
tttgcagccatttgtctcagaaatgctttgctgctgttaccagaagaccagcaggaacca
aagcaggagaatgggtctaagacaagtaaccagttgggcgggtctggagaaaatgctgaa
agtcaggagacttgcagcagtaaaagtcatgatggagataaattcatcccagctccacct
tcttctcctctcagaaaacaagaattggagaatttaaggtgctcaatccttgcttgtagt
gcttatgtggccctggccttgggtgacaacctcatggctttgaatcatgcggacaaactg
ctccagcagcctaagctgtcgggatctcttaagtttttgggccatttatatgcagcagaa
gccctcatctctcttgacagaatctctgatgccattacgcatttgaatcctgaaaatgtc
actgatgtgtctttggggatctcttcaaatgagcaggaccaaggacctgacaaaggggaa
aatgaagcaatggagtcttctggcaagcaaacacctcaatgctacccaagctcagtcaat
tctgcccgaacgatgatgctgtttaatctcggcagtgcttactgtttgcgcagtgaatac
gacaaggcccggaagtgtctacaccaggcggcttccatgattcatcctaaggaaatacct
cctgaggctatcctgctggctgtctacctagagttacagaacggtaatacccagctggcc
ttacagatcatcaaaagaaatcagctgctcccttctgtaaaaacactttctgaaatacga
aagaagccagtgttccagtctgctcaccctatccagcccatccagatgccagctttcacc
cctgggcagagaaagtga
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