Gracilinanus agilis (agile gracile opossum): 123250626
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Entry
123250626 CDS
T07702
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082
ATP-dependent chromatin remodeling
gas04714
Thermogenesis
gas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123250626 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123250626 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123250626 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123250626 (SMARCD1)
03036 Chromosome and associated proteins [BR:
gas03036
]
123250626 (SMARCD1)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123250626 (SMARCD1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123250626 (SMARCD1)
PBAF complex
123250626 (SMARCD1)
GBAF(ncBAF) complex
123250626 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
123250626
NCBI-ProteinID:
XP_044535723
LinkDB
All DBs
Position
5:complement(292463189..292472087)
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AA seq
453 aa
AA seq
DB search
MLPGSRMTPQGPSMGPPGYGGNPSVRPGLTQSGIDQSRKRPAPQQIQQVQQQAVQNRNHN
AKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKL
RIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVI
ELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLA
RLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLH
ALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDN
KIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFY
FQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttgccagggagccgtatgacacctcagggaccttctatgggacctcctggctatggg
gggaatccttcagttcgacctggtctgacccaatcaggaatagatcagtcaagaaagaga
ccagctcctcaacagatccagcaggtccagcagcaggcagtccagaatcgaaatcacaat
gcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgagctggtacca
gaatcccaggcctatatggacctcttggcttttgaaaggaaactcgatcagaccatcatg
aggaaacggctagatatccaggaggctttgaaacgacctatcaagcaaaaacggaaactt
cgaattttcatttcgaatactttcaatccagctaaatctgatgctgaagatggagaagga
accgtggcgtcctgggagcttcgggtggaaggacggcttctcgaggattcagctctgtct
aaatatgatgctaccaagcagaagcgtaaattctcctccttctttaagtctttggtgatt
gagctggacaaagatttatacgggccagacaaccacctggtggaatggcacaggactgct
accactcaggagacagatggcttccaggtgaagcggccaggggatgtgaatgttcgatgc
actgttttgctgatgctggattaccagcctcctcagtttaaattggaccctcgcctggcc
cgacttcttggcatccacacccagacccgtccagtgatcatccaagcactgtggcagtac
atcaagactcataagcttcaggacccccatgaacgggagtttgttctctgtgataaatac
ctccagcagatattcgagtcacaacggatgaagttctctgagatccctcagcgactccat
gccttgcttatgccaccagaacccatcatcattaatcacgtcatcagcgttgaccctaat
gaccaaaagaagactgcctgttatgacattgatgtggaagtggatgataccctaaagact
cagatgaattccttcctgctctctactgccagccagcaggagattgctgctctagacaac
aagatccatgagacaatagagaccatcaaccagctgaaaacccaacgagaattcatgctg
agttttgccagagaccctcagggcttcatcaatgactggcttcagtcccagtgccgggat
ctgaagaccatgactgatgtggtgggtaacccagaagaggagcgccgagctgagttctat
ttccagccatgggctcaggaggccgtgtgcagatatttctactctaaggtgcaacagaga
cggcaggaactggagcaggccctgggcatccgaaatacataa
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integrated database retrieval system
