Gracilinanus agilis (agile gracile opossum): 123250734
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Entry
123250734 CDS
T07702
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05202
Transcriptional misregulation in cancer
gas05206
MicroRNAs in cancer
gas05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
123250734 (ZEB1)
05206 MicroRNAs in cancer
123250734 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
123250734 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123250734 (ZEB1)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
123250734 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
123250734
NCBI-ProteinID:
XP_044535893
LinkDB
All DBs
Position
5:72505380..72641902
Genome browser
AA seq
1004 aa
AA seq
DB search
MQRNSQTALSRLQGSEARFYFSGYFKIKTISSFTGTPDAFSQLLTCPYCDRGYKRFTSLK
EHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKFKCTECG
KAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVNGRSRTAL
KTSQCSSPSLSASPGSPSRPQIRQKVENKPLQEQLPVNQIKTEPVDYEFKPIVVASGINC
SAPLPNGVFGGGSPLQATGSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGSVIR
QVLENNHANLASKDQETISSPTIQPGGHSLISAISLPLVDQDGTTKIIINYSLEQPGQLQ
VVPQNLKKENSVPTNSCKSEKLPEDLRVKSEKEKHFEGGPEDSTCLLCEDCPGDLNALPD
LKHYDPKQPAPPAQPSTPEAGKAEPPAPEDPGEGRLSPSQPPLKNLLSLLKAYYALNAQP
SSEELSKIADSVNLPLDVVKKWFEKMQAGQIPVQPSDPSSPEPGRVGVPIADKDPAAPAN
ADEPQDGATPSKSPRKTTKSPAVPVGSALNGSRSRTPSPSPLNLSSSRNTQGYAYTAEGA
QEEPQVEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEQPPKDSCGTD
SDPVVNVIPPSANPINIAIPTVTAQLPAIVAIADQNSVPCLRALAANKQTILIPQVAYTY
SATVSPAVQEAPAKGTQPSGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYA
CDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKC
GKRFSHSGSYSQHMNHRYSYCKREAEERDGPEQEEAGPEALAHERARTRASPSQIDSDER
ESLTREEDEESEKEEDEEEEKEVEELQEEKGCGKPQEEEDGEEEEEEGEEEEEEEEEEEE
EGEGEAADAEGPRKDEEAVNQARSVEQEITENGEQGSKEKTNEA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaattcacagacagcactgtcccgacttcaggggagcgaggctcggttctat
ttttctggatatttcaagattaaaactatttcctcttttacaggaacgccagatgcattt
tctcaacttcttacctgcccttattgtgaccgaggctacaaacgctttacctctctgaaa
gaacacattaaatatcgccatgaaaaaaacgaggacaacttcagttgttccttgtgcagc
tacacgtttgcataccgaacacagcttgagcgtcacatgacatcccataagtcaggaaga
gatcaaagacatgtgacccagtctgggggtaaccgaaaattcaagtgcacagaatgtggc
aaagctttcaagtataaacaccaccttaaagagcacttaaggatccacagcggagagaag
ccatatgaatgcccaaactgcaagaaacgtttttcccattctggttcctatagctcacat
ataagcagtaagaaatgtatcggtttgatgcctgtgaacggccggtccagaacggctctc
aagacgtcccagtgctcgtccccttctctgtcggcatccccgggcagtcccagcagaccc
cagatccggcaaaaggtcgagaacaagcccttgcaagaacaactgccagtaaaccaaatt
aaaactgaacctgtggattatgaattcaagcccatagtggttgcttcaggaatcaactgt
tcggccccgttgcccaacggggtctttggtggtggcagccccttgcaggccaccggctct
cctcagggtgtggtgcaggccgtggtcctcccaacggtcggcttggtgtctcccataagt
attaacctgagcgacattcagaacgtcctcaaagtggccgtggatggcagcgtcatccgg
caggtcctggagaacaatcacgccaacctggcatccaaagatcaagaaacaatcagctca
cccacgatacagccggggggccattccctcatttcggccattagtcttcccttggttgac
caagatggaacaaccaaaattatcatcaactacagcctggagcaacccgggcagctacag
gtggttccccagaatctgaaaaaagagaactcggtccccaccaacagctgcaaaagcgaa
aagttgcccgaagaccttagagtgaagtctgagaaagagaagcactttgaagggggcccc
gaggacagcacctgccttctgtgcgaggactgccccggagacctgaacgcacttccagac
ctaaagcactatgaccccaagcagcctgctccgcctgcccagcccagtacccccgaagcg
ggcaaggctgagccccccgccccagaggaccccggagagggccgcctgtcccctagtcag
ccaccgctgaagaacctcctgtctctcctcaaagcctactacgcactcaacgcccagccc
agctctgaggagctctccaagattgcggattctgtgaacctgcccctggacgtagtgaaa
aagtggtttgagaaaatgcaagctggacagattccagtacagccgtccgatccgtcctcc
cctgaaccaggcagagtcggagtacccattgccgacaaggatcctgcagcacctgcaaat
gcagacgaaccccaggacggtgcgacgccttccaagagtccaaggaagacgactaaatct
cccgccgtccccgtgggctccgcactgaatggctctagaagtcgcacgccatccccatca
ccgctcaacctctcttcatcccggaacacgcagggttacgcatacacggcagaaggggca
caagaagagccacaagtggaacctctcgatctttcactaccaaagcaacatggagaatta
ctggagagatccaccatcactagtgtttaccagaacagtgtttattctgtccaggaagaa
cccttgaacttgtcctgcgccaaaaaggagcagccgcccaaggacagctgtgggacggac
tcagacccagttgtcaatgtgatcccaccaagtgccaaccccatcaacatcgccatcccc
accgtcactgcccagttacctgccatcgtggccattgccgaccagaacagcgtcccgtgc
ttgcgggcactggctgccaataagcagaccattctgattccccaggtggcatatacatat
tctgcaacggtcagccccgctgtccaagaagcgcccgccaaagggacccagcccagtgga
aatcaggatgaaaggcaagacactagctcagaaggagtatcaaatgtagaggatcagaat
gattctgattctaccccacccaaaaagaaaatgcggaagacagaaaatggaatgtatgcc
tgtgatttgtgtgataagatattccagaaaagcagttccctattaagacataaatatgaa
catacaggtaaacgacctcatgagtgcggaatctgcaaaaaggcatttaaacacaaacat
catttaatcgagcacatgcgtctacattctggagaaaagccttatcaatgtgacaaatgt
ggaaaacgtttctcacactcggggtcttattcacaacacatgaatcaccgctactcttac
tgcaagagagaagctgaggagcgcgatggccccgagcaggaagaggcaggccccgaagcc
ctggctcacgagcgggccaggaccagggcatctccctcccagatcgactcggatgagaga
gagagtttaaccagggaagaggatgaagagagcgaaaaagaggaagatgaggaggaggaa
aaggaggtggaagaacttcaggaagaaaaaggatgtggaaaaccccaagaggaggaggac
ggggaggaagaagaggaggaaggagaggaagaggaggaggaggaggaggaggaggaggaa
gagggcgagggagaagcagcagatgctgagggtcccaggaaggatgaagaggccgtcaat
caagctcgcagtgtagaacaagaaatcacagagaatggcgaacaaggatcaaaagagaaa
acaaatgaagcctga
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