Gracilinanus agilis (agile gracile opossum): 123250919
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Entry
123250919 CDS
T07702
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123250919 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gas04990
]
123250919 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
gas04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
123250919 (PDLIM5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
123250919
NCBI-ProteinID:
XP_044535959
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Position
6:23073770..23273343
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AA seq
601 aa
AA seq
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MSNYNVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQG
MTHLEAQNKIKACTGSLNMTLQRASSTPKPEPISVQKGEPKEVVKPVPITSSAVPKVTST
SNLAYNKAPRPFGVVSSPKVTSIPSPSSAFTPAHSTSSSHASPPPVAAVTPPPFATSGLH
ANAKPSADQPLPASSSVKTAVNVPRQPAATSPYTSDPAQELAEGQRRGPQADSKQQNGTT
PPKRPPRKHIVERNTEFYHIPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTE
HLKESDTDNTKKTNNIQDSSQPAVSTVTTARNVSQGPESPVASRPGVASLTTAAAFKPSG
STNVIKSPNWQRQNPTAPSTGRISNNITTSGATAPTSPAQPQLNEQDTFVQRAEHIPAGK
RTPMCAQCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFF
APECGRCQRKILGEVINALKQTWHVSCFVCVACNKPIRNNVFHLEDGDPYCETDYYALFG
TICHGCEFPIEAGDLFLEALGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSLN
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacaacgtatccttggttggcccagctccttgggggtttcggcttcaaggt
ggcaaggacttcaatatgcctttgaccatctctagtctaaaggatggtggtaaggcgtct
caagcccatgtgagaataggagatgtggttctcagcattgatgggataagtgctcaggga
atgacacatcttgaagcccagaacaagattaaggcttgtacaggctctttgaacatgact
ctgcaaagagcatcctctacaccaaagcctgaacctatttcagttcagaagggagaaccc
aaagaagtagttaagcctgttcccattacatcctccgctgtgcccaaagtcacttccaca
tccaacttggcctacaataaggcaccacggccttttggggttgtatcttctccaaaagtc
acatccatcccatcaccatcatctgccttcaccccagcccattcgacctcttcatcacat
gcttcccctccgccagtggctgctgtcacacctcccccatttgctacatctggactgcat
gctaatgccaaacctagcgccgaccagcctttacctgcctcgagctctgttaaaactgca
gttaatgtcccacggcagcccgcagccacgagcccgtacaccagcgaccctgcccaggag
ctagccgaggggcagagaagaggaccccaggctgacagtaaacagcagaatgggacaact
ccacctaaacgaccaccaagaaagcatatcgtggaacgtaatacagagttttaccacata
ccaactcatagcgatgcaagtaaaaaacgactgattgaggatactgaagactggcatcca
cggacaggaaccacacagtcccgttctttccgaatcttggctcagatcactggcaccgaa
cacttaaaagaatcagacactgataatacaaagaagacaaacaatattcaggattcctcc
cagcctgcagtttccacagtgaccacagcaaggaatgtgtcccagggcccagaaagtcct
gttgcttctagaccaggagtggccagcctcacaactgcagcagctttcaaaccttcaggt
tccacaaatgtcatcaagtcaccaaattggcaacgtcaaaacccaacagctccatcaact
ggaaggatctcaaacaatattaccacatctggagccactgcaccaaccagcccagcccag
cctcagctaaatgaacaagacaccttcgtgcagagagccgagcacatcccagcaggcaaa
cgcactccaatgtgtgcccagtgtaaccaggttatcagaggacctttcctagtggcactg
ggcaaatcctggcatccagaagagtttaactgtgcccactgcaaaaacaccatggcttac
attggatttgtggaggagaagggagcattgtactgtgagctgtgctatgagaaattcttt
gctcctgaatgtgggcgctgccaaaggaagatcctgggagaagtcatcaatgctttgaaa
caaacttggcatgtttcctgttttgtgtgtgtggcctgcaataaacccattcgaaacaat
gttttccacttggaagatggtgatccctactgtgaaacagattactatgctctttttggt
accatatgccatggatgtgaatttcccatagaggcaggagatctgtttctggaagctctg
ggtcatacctggcatgatacatgctttgtgtgttcagtgtgttctgacagtttggaaggt
cagaccttcttctccaaaaaggataagccactctgcaagaagcatgctcattctctgaat
ttctga
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