Gracilinanus agilis (agile gracile opossum): 123251106
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Entry
123251106 CDS
T07702
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123251106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123251106
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123251106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
123251106
NCBI-ProteinID:
XP_044536219
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All DBs
Position
6:complement(65276986..65278824)
Genome browser
AA seq
523 aa
AA seq
DB search
MASSRASATATKTPTRTPEDTASPVVKKPHIYYGSLEEKEKERLARGESGLLGKEGIKAG
IEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALEEPI
TLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGSNNLKTARL
WIANYSLPRAMKRLEEARLHKEIPETSRTSQKQELHKSLRSLNNFCSQIGDDRPISYCNF
SPNSKLLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDKKDVNLASC
AADGSVKLWSLESDEPVADIEGHSVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL
HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH
PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctagagcttcggcgacggcgaccaaaacccctactaggactcctgaagac
acagcttcccctgtggtaaagaagcctcatatctattatggcagtttggaagagaaggag
aaagagcgtcttgcaagaggggagtccggattgttgggaaaagaaggaattaaagctgga
attgaggctggaaatattaacataacttctggagaggtgtttgaaattgaagaacatatc
agtgaaagacaagcagaagtgttggctgagtttgagcgaagaaagcgagccaggcaaatc
aatgtctccactgatgactcagaagtcaaggcttgccttcgagccttggaggaaccaatc
acactctttggagagggccctgccgaaaggagagagagattgagaaatattctctctgtg
gttggcacagatgccttgaaaaagaccaaaaaagatgatgaaaaatccaaaaagtccaaa
gaagagtatcagcaaacctggtaccatgaaggatccaacaacctgaagactgcaaggcta
tggattgctaattattcactacccagggcaatgaagcgcttggaggaagcccgtctccat
aaagagattccagagacatctaggacatcacagaagcaggaactgcacaaatctcttcgg
tctttgaataacttctgcagccagattggagatgatcgtcccatatcttattgtaatttc
agtccgaattccaaactactggccacagcttgttggagtggactgtgcaaactgtggtct
gtccctgattgcagcctcttgcacaccctaagaggccataatactaatgtaggagcaatt
gttttccaccccaaatccactgtatctttggacaagaaagatgtcaacctagcttcttgt
gctgctgatgggtctgtgaaactgtggagtctggagagtgatgagccagtggcagatatt
gaaggccattcagtaagggtggcgagagtgatgtggcatccttcaggacgttttctgggc
accacctgctatgatcgatcctggcgcctatgggacttggaggcccaggaagaaattcta
caccaggagggccacagcatgggagtatatgacattgccttccaccaggatggttctttg
gctggcactgggggactggatgcctttggtcgtgtatgggacctccgcacaggacgatgc
atcatgttcctagagggccacctgaaggagatttatggcatcaacttttcaccaaatgga
taccatattgcaactggcagtggtgacaacacatgcaaagtgtgggacctgcggcagagg
cgttgtgtctacaccatccctgctcaccagaacttggtaactggagtcaagtttgagcct
atccatgggaatttcttactcactggtgcctatgacaacacagccaagatctggacacat
cctggttggtccccactgaagaccctggctggccatgaggggaaagtaatgggcttagat
atttcctctgatggtcagcttatagccacttgttcctatgatagaaccttcaaactctgg
atggctgaatag
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