Gracilinanus agilis (agile gracile opossum): 123251182
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Entry
123251182 CDS
T07702
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123251182 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123251182 (SMARCA5)
03036 Chromosome and associated proteins [BR:
gas03036
]
123251182 (SMARCA5)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123251182 (SMARCA5)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123251182 (SMARCA5)
RSF complex
123251182 (SMARCA5)
WICH complex
123251182 (SMARCA5)
B-WICH complex
123251182 (SMARCA5)
NORC complex
123251182 (SMARCA5)
BRF complex
123251182 (SMARCA5)
NuRF complex (fruit fly)
123251182 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
123251182
NCBI-ProteinID:
XP_044536308
LinkDB
All DBs
Position
6:complement(129517743..129571622)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSSAAEPPPPPPLPPTSETIPPAPAVPATGGGGGNHNKSGVESAPAPAGPPLGDAEMEDV
FDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMK
PGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLR
DYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTL
HNWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFN
WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS
ADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQR
EWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTN
SGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS
INAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT
VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHV
FASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE
KQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRL
FELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQG
FTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIM
AQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHK
LGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKA
EKKKRGPKPSAQKRKMDGAPDGRGRKKKLKL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagccgccaccgccacccccgctgccgccgacctcggagaccata
cctcccgccccggccgtgcccgccaccggcggcggcggcggcaaccacaacaaaagcggc
gtggagagcgccccggcccctgccggcccccctttgggcgacgcggagatggaggatgta
tttgatgatgcatcaccagggaagcaaaaagaaatccaagaaccagatcctacatatgaa
gaaaaaatgcaaactgatcgagcaaacagatttgagtatctgttaaagcagacagagttg
tttgcacatttcattcagcctgctgctcagaagactccaacttcaccattgaagatgaaa
ccaggacgtccaagaataaagaaagacgaaaagcagaatttgctgtcagttggagattac
aggcatcgtcgaacagagcaggaggaagatgaagagctgttaacagaaagctccaaggcc
accaacgtgtgcactcggtttgaggactccccatcatatgtaaaatggggtaaactgaga
gattatcaggttcgaggattaaattggttaatatctttgtatgagaatggaatcaatgga
atccttgcagatgaaatgggtctggggaagacacttcaaacaatttctcttcttggatat
atgaaacactatagaaatattcctggtcctcatatggtattggttccaaagtctactttg
cataactggatgaatgaattcaagagatgggtacctacgcttagatcagtttgtttgata
ggtgataaagaacaaagagctgcctttgtcagggatgtattattaccaggagagtgggat
gtatgtgtaacatcatatgagatgcttattaaagagaagtctgttttcaaaaagtttaat
tggaggtatttagtcattgatgaagctcacagaatcaaaaatgaaaaatccaagttgtca
gaaatagttagagaattcaagactacaaatcgtctactgctaacaggaacacctcttcag
aacaacttgcatgaactctgggcacttctcaactttttgttgccggatgtttttaactca
gctgatgactttgattcatggtttgatacgaataactgcctcggggatcaaaagctagtt
gaacgtcttcacatggttttacgcccattccttcttcgtagaattaaggctgatgttgag
aagagtttacctccaaagaaagaagttaaaatttatgttggtctcagcaaaatgcaaaga
gaatggtatacacggatactaatgaaggatatagacatattaaactctgcagggaaaatg
gacaaaatgagactgttgaatattctaatgcaattgaggaaatgttgtaatcatccgtat
ctctttgatggagctgaacctgggccaccttatacaacagatatgcatctggttaccaat
agtggcaaaatggttgtcctagataaacttcttcctaagttaaaagagcaagattcaaga
gtactaatcttcagtcagatgacaagagtattagacattttggaagattattgcatgtgg
agaaattatgaatattgcaggttggatggacagactcctcatgatgagagacaagattcc
atcaatgcatacaatgagccaaacagctccaagtttgtttttatgttaagtacacgtgct
ggtggtcttggaataaatcttgctactgctgatgttgtgatcttatatgattcagactgg
aatccacaagttgatcttcaggctatggatcgagcgcacagaattggacaaaccaagact
gttcgagtatttaggtttatcactgataataccgtggaggaaagaatagtggaaagagca
gagatgaaactcagattggattcaatagtcattcaacaaggaaggcttgtagatcaaaat
ctgaacaaaattgggaaagatgaaatgttacagatgattcggcatggtgcaacacatgta
tttgcctcaaaggagagtgaaattactgatgaagatattgatggtattttggaaagaggt
gcaaagaagactgcagaaatgaatgaaaagctctccaaaatgggtgaaagttcactaagg
aatttcaccatggatacggaatcaagtgtatataactttgaaggtgaagactacagagaa
aaacaaaagatggcattcacagagtggattgaaccacctaagcgagaaagaaaagccaac
tatgctgttgatgcatatttcagggaagcccttcgagttagtgaacctaaagctcctaag
gctcctcgacctccaaaacaacccaatgttcaggatttccagttcttccctccacgttta
tttgagttattggaaaaagaaattttgtattacagaaaaacaattgggtataaggtaccc
cgtaatcctgatctaccaaatgcagcccaggcacaaaaagaagagcagctaaaaatcgat
gaagcagagccccttaatgatgaagagcttgaagaaaaagagaagcttctgacccaggga
tttaccaactggaacaagagagacttcaaccaattcatcaaagctaatgagaagtggggc
cgtgatgatattgagaacatagcaagagaagtagaagggaaaacaccagaagaagttatt
gaatattcagctgtcttctgggaacggtgtaatgaacttcaggacatagagaagatcatg
gcccagattgaaaggggagaagcaagaatacaaagaagaattagtatcaaaaaagcactt
gatacaaagattgggcgttacaaagcaccttttcaccaactgagaatatcatatggtact
aacaaaggaaagaactacaccgaggaagaggatcgatttctcatttgtatgcttcacaaa
cttggatttgataaggaaaatgtctatgatgaattgcgacagtgtattcgaaactctcct
cagttcagatttgactggttcctcaagtccaggacagctatggaacttcagaggaggtgt
aacacattaattactttgattgaaagagaaaacatggagttagaagaaaaagaaaaggca
gagaaaaagaaacgaggaccaaagccttcggcgcagaagcgtaaaatggatggagcgcct
gatggtcgaggaagaaaaaagaagctaaagctatga
DBGET
integrated database retrieval system
