Gracilinanus agilis (agile gracile opossum): 123251350
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Entry
123251350 CDS
T07702
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04140
Autophagy - animal
gas04148
Efferocytosis
gas05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123251350 (VPS16)
04148 Efferocytosis
123251350 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123251350 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123251350 (VPS16)
Membrane trafficking [BR:
gas04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123251350 (VPS16)
Hops complex
123251350 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
123251350
NCBI-ProteinID:
XP_044536530
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Position
6:227425632..227466457
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AA seq
839 aa
AA seq
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MDCYTADWNPLGEAAFYRKFELYTMDWDLKEPLRDCLVAAAPYGGPIALLRNPWKKEKSP
SIRPLLQIYSSSGVSLASLLWKSGPVVLLGWSAEEELLCVQEDGSVLVYGLHGDFRRHFS
MGNEVLQNRVLDARVFHTEFGSGIAILTGAHRFTLSANVGDLKLRRMPEVPGLQALPSCW
TVLFQDRVTFVLLAVGPDLFLLDNTACSGVVPPGLAPGVGGFLQMAVSFNYRYLALFTDT
GHIWMGLASLKEKLYEFNCNIRAPPKQMAWCSRPKGKQKAVVVAWERRLLVAGNVPESIQ
FVLDEDSYLVPELDGVRIFSRNVHEFLHEVPVASEEIFRIASMAPGALLLEAQKEYEKES
QKADEYLREIQEREQLPQAVRQCIEAAGHEHQPEMQKSLLRAASFGKCFIDKFPPDTFVR
MCQDLRVLNAVRDYPIGIPLTYTQYKQLTIEVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVVLHLKNELNRGDFFMTLRNQPVA
LSLYRQFCKHQELETLKDLYNQDDNHQELGNFHIRASYAAEERIEGRVAALQTAADEYYK
AKNDFAAKATEEQMRLLRLQRRLEDELGGHFLDLSLHDTVTSLLLSGSNKRAEQLARDFR
IPDKRFWWLKLTALADREDWEELEKFSKSKKSPIGYLPFVEVCMKRHNKFEAKKFAARVS
PEQRVKAFLLIGDVAQAADVAIEHRNEAELSLVLSHCTGASDGATADKIQRARALAQRK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacactgcggactggaaccccctcggggaggcggccttctatcggaagttt
gagctctataccatggactgggacctgaaggaaccactcagagactgcctggtagctgcg
gctccttacgggggccccattgctctattgagaaatccttggaagaaggagaagtcacct
agtattcgtccattgcttcaaatttattcatcctctggagtgtctctagccagcttgttg
tggaagagtgggccagtggtgttactgggctggtcagcagaggaggagctgctatgtgta
caagaagatggctctgtactggtctatgggctgcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggacgcccgagtgttccacacagagttt
gggtcagggattgccatcctcactggtgcccatcgttttacactcagtgccaatgtaggt
gacctgaagcttcgtaggatgcctgaggtgccaggactccaggctctgccctcatgctgg
acggttttgttccaagatagagtgacctttgtgcttttagctgttggtcctgacctcttc
ctgttagacaatacagcctgctcaggggtggtgccccctggcttggctccgggagtgggt
ggcttcctccagatggctgtgtccttcaattatcggtacctggcattatttactgacaca
ggccatatttggatgggcctggcttcccttaaggagaagctttatgagttcaactgcaac
atacgagccccacccaagcagatggcctggtgtagccgcccaaagggcaagcaaaaggct
gtcgtggtggcctgggagcgacggcttctggtagctggaaatgtacctgaaagcatccag
tttgtactagatgaggattcctatctggtgcctgagctggatggagttcggatcttctca
cgaaacgtccatgaatttttacatgaagttccagtggccagtgaggagatcttcaggatt
gcttccatggccccaggagctcttctactggaggcccagaaggaatatgagaaagaaagc
cagaaagcggatgagtatctccgggagatccaggagcgggaacagctgccccaggccgtc
cggcagtgtattgaggctgctggccacgagcaccagcctgaaatgcagaagagcctgctc
agggcagcctcctttggaaagtgttttattgacaagtttccaccagacacctttgtgcgc
atgtgtcaggacctgagagtgctcaatgctgtacgagactatcccattggaatccctctc
acctatacccaatacaagcagctcaccatcgaagttctgctggacaggctggtgttacgg
cgactctatcctctggccattcaaatctgcgagtaccttcgacttcctgaggttcaaggt
gtcagccgcatcctggctcactgggcctgctacaaggtacagcagaaggatgtgtcggat
gaagacgtcgctcgtgccattaaccagaagcttggagatacaccgggtgtctcctattcg
gacatcgctgcccgcgcctatggctgtggccggaccgagctggccatcaagctgctggaa
tatgagccccgctctggggagcaggtgccacttctgctgaaaatgaagaggagcaaactg
gccttgagtaaggccattgagagcggggacactgacctagtgtttacagttgtcttacac
ctgaagaacgaactgaatcgtggagatttcttcatgaccctcaggaaccagcctgtggct
ctgagtctgtatagacagttctgcaagcaccaggagctggagacactgaaggatctttac
aaccaagatgacaatcaccaagagcttggcaacttccacatccgagccagctatgctgct
gaggagcggatcgagggcagggtagcagcccttcagacagcagctgacgaatactacaag
gccaagaatgactttgctgctaaggccacagaggaacagatgcgactcctgcggctgcag
cggcgcctggaggatgagctgggtgggcacttcctggacctgtctctgcatgacacagtg
acctccctcctcctcagtgggagcaacaagcgtgctgagcagctggctcgggacttccga
atccctgacaaaaggttctggtggctaaagctgactgcattggccgatcgggaggactgg
gaagaactagagaagttttccaaaagcaagaagtcacccattggatatttgccctttgtg
gaagtgtgcatgaaacgacacaacaaattcgaagccaagaagtttgctgctcgagtgagc
cccgagcagagagtcaaggccttcctcctcatcggggatgtggctcaggctgcagatgtg
gccattgaacaccggaatgaggcagagctaagccttgtcctgtcccattgcactggggcc
tcagatggagccacagctgacaaaattcagcgtgctagggccctggcccagaggaaatga
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