Gracilinanus agilis (agile gracile opossum): 123251360
Help
Entry
123251360 CDS
T07702
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04120
Ubiquitin mediated proteolysis
gas04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123251360 (SYVN1)
04120 Ubiquitin mediated proteolysis
123251360 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123251360 (SYVN1)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123251360 (SYVN1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123251360 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
123251360
NCBI-ProteinID:
XP_044536544
LinkDB
All DBs
Position
6:complement(288211714..288217138)
Genome browser
AA seq
594 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGALDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPVQSPPAPEPPEQGPPPAPHQP
PIIPPPPNFPQGLLPPFPPGMFPLWPPMGPFPPMPPPSNADVPPSSPSASTNAPRPSGSV
SEAAPAPGFPFPPPWMGMPLPPPFGFPPMPVPPAGFAGLTPEELQALEGHERQHLEARLQ
SLRNIHTLLDAAMLQINQYLTVLASLGPPRPPAPASPPEASTMAAAAAASSSSSIPSSEA
TPPSPGESPLPPDTTQLQPDPESIGAEELSEDGEPNTVELRRRRLQKLESPASH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggccgtgatgatggcggccagcctggcgctgaccggggcggtggtggcc
cacgcctactacctcaagcaccagttctaccccaccgtggtctacctgaccaagtccagc
ccgagcatggccgtcctatacatccaggccttcgtacttgtcttcctcctgggcaaggtg
atgggcaaagtgtttttcgggcagctgcgagcggccgagatggagcacctcctggagcgc
tcctggtacgctgtcacagaaacctgcctggccttcaccgtctttcgggatgacttcagc
ccccggttcgtggcgctcttcaccctcctcctcttcctcaagtgtttccactggctggct
gaggatcgggtcgattttatggagcgcagcccaaacatctcctggctctttcactgccgg
attgtctccctcatgctcctcttgggtgctctggacttcctctttgtcaatcatgcctat
cacagcatcctgacccggggggcctccgtgcagctggtctttggctttgagtacgccatc
ctgatgacgatggttcttacaatcttcatcaaatatgttctgcattcaatcgatctccag
aacgagaacccctgggacaacaaggctgtctacatgctctacacggagttgttcacaggc
ttcatcaaagtccttctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactttttgccatccggcccatgtacctggccatgaggcagtttaagaaggcagtgaca
gatgctatcatgtctcgccgggccatccgaaacatgaacacactgtacccagatgccacc
cctgaggagctccaggctatggacaatgtctgcatcatctgcagagaagaaatggtgact
ggtgccaagaggcttccctgcaaccatatcttccataccagctgcctgcgatcctggttc
cagcggcagcaaacctgccccacctgccgaatggatgtcctgcgagcttcgcttcctgtc
cagtccccaccagccccagagcctcctgagcagggccctccccctgctccacaccagccc
cccatcatccccccaccccccaactttccccaaggcctcctgcctccatttcctcctggg
atgttccccttgtggccccccatgggcccctttcctcctatgcctccccccagcaatgca
gatgtccctccttcctcaccttccgcctcaaccaatgcccctcggcccagtgggtctgtc
tctgaggccgctccggctcctggctttcccttccctcctccctggatgggcatgcccctg
cctccaccgtttgggttcccccctatgccagtacccccagcaggctttgcaggcctgact
cctgaggagctacaggccctggagggccatgagcggcagcatctggaagctcgactccaa
agccttcgaaacatccacaccctgctagacgctgccatgctgcagattaaccagtacctc
actgtgctggcctctctgggccctccccgacctcctgctcctgccagtcctcctgaggca
tctacaatggctgctgcagcagcagcatcctcttccagcagcatccccagctctgaggcg
acacccccctcaccgggagagtccccactcccccctgacacaacacagctgcagccagat
ccagagtctattggggcagaggagctgagcgaagatggggagcccaacacggtggagctc
cgccgccgccgcctgcagaagctggagtcccctgcctctcactga
DBGET
integrated database retrieval system
