Gracilinanus agilis (agile gracile opossum): 123251490
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Entry
123251490 CDS
T07702
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123251490 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123251490 (TNPO1)
03009 Ribosome biogenesis [BR:
gas03009
]
123251490 (TNPO1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123251490 (TNPO1)
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123251490 (TNPO1)
Pre-60S particles
123251490 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
IBN_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
TPR_TTI1_C
HEAT_GCN1_C_2
INTS7_N
Dopey_N
CandA_N
PIK3R4-like_middle
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
123251490
NCBI-ProteinID:
XP_044536692
LinkDB
All DBs
Position
1:335910028..335986091
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AA seq
903 aa
AA seq
DB search
MVVGGGGAPCGALFGLAQEGAGPRSCFGPAGPGDGRRAQSGLTPPRGGKLEQLNQYPDFN
NYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIR
ATVGILITTIASKGELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV
LDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDE
EPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQP
ICKDVLCRHLSKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQ
QHDEDGIEEEEDDDDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLF
HPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAH
WVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLV
FAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLL
ECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDL
LSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA
DFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTL
LENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSG
VIQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAY
YGV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgggaggtggcggagccccgtgcggggccctgttcggcctggcccaagaaggc
gcggggccgcgttcgtgctttgggcccgccgggcctggggacggaaggcgagctcagtcg
ggcctcacccctccccgtggcgggaaactggaacaactcaaccaatatcctgattttaac
aactacctaatttttgtacttacaaaattaaaatctgaagatgaacccacaaggtctttg
agtggtctcattctgaagaacaatgtgaaagcacactttcacaacttcccaaatggagta
acagattttattaagagtgaatgcctgaataatattggcgattcctcccctctaattaga
gccactgtgggtattctgattacaaccattgcctccaagggggaattacagaactggcct
gagctcttgccaaagctctgtagcttgttggattctgaagattataatacgtgtgaagga
gcatttggagcacttcagaaaatatgtgaagattctgctgaaattttagatagtgatgtt
ttagaccgtccactcaacatcatgattcctaaatttttacagttcttcaaacatagtagt
cccaaaataaggtctcatgctgttgcatgtgttaatcaatttatcatcagtagaacccaa
gctctgatgttacacattgattcttttattgagaatctgtttgcattggctggtgatgag
gaaccagaagtacgtaaaaatgtatgtcgggctcttgtgatgttacttgaagtccgaatg
gatcgcctacttcctcatatgcataatatagttgagtatatgcttcagaggacccaagat
caagatgaaaatgtagctttggaagcttgtgaattttggctcactttggctgaacagcca
atctgcaaagatgtgctctgtagacatctttctaagttaattcctgtgttagtaaatggt
atgaagtattcagagatagatatcattctccttaagggtgatgttgaagaagatgaagct
attcctgatagtgaacaagatataaggcctcgctttcatcgatcacggacagtggctcag
cagcatgatgaagatggaattgaagaagaggaagatgatgatgatgaacttgatgatgat
gatacaatatctgactggaatctaagaaagtgttctgctgctgctcttgatgtcctggcc
aatgtgtttcgtgatgaacttttgccacatattttgcccctcctgaaagaattacttttt
catcctgaatgggttgttaaagaatcaggcatcttggtcttaggagcaattgctgaaggt
tgtatgcagggtatgattccatatctgcctgaactcatccctcaccttattcagtgcctc
tctgataaaaaggctcttgtacggtccattacatgctggactcttagccgctatgcacac
tgggtagttagccagcccccagatacgtacttgaagccattaatgacagaattacttaaa
cgtattctagatagcaacaagagagtacaagaagctgcctgcagtgcctttgctaccctg
gaagaggaggcttgtacagaacttgttccctaccttgcttatatacttgacaccctggtc
ttcgcgtttagtaaataccagcataagaatctgctcattctttatgatgccataggaaca
ttagcagattctgtaggacatcatttaaataaaccggaatatatacagatgctaatgcct
ccactaatccagaaatggaacatgctaaaagatgaagataaagatctcttccctttactt
gagtgcctgtcttcggttgccacggccctgcagtctggcttccttccatactgtgaacct
gtctatcagcgttgtgtgaatcttgtccagaagactcttgcacaagccatgttacacaat
gctcaacccgatcaatatgaggctcctgataaagatttcatgattgtggctcttgattta
ctcagtggcctagctgagggacttggaggcaacattgaacaactagtagctcgaagtaac
attctaacactgatgtaccagtgtatgcaggataaaatgccagaagttcgacagagttcc
tttgccttgttaggtgatctaacaaaggcatgctttcagcatgttaaaccttgcatagct
gatttcatgccaatattgggaaccaacttaaatccagaatttatttcagtctgcaacaat
gctacatgggcaattggagaaatctcaattcaaatgggtatagagatgcagccttatatt
ccaatggtgttgcaccagcttgtagaaatcattaacaggcccaacacaccaaagacgttg
ttagagaatacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggcc
cccatgctacagcagtttataagaccctggtgtacctctctgaggaatataagggacaat
gaggaaaaggattcagcatttcgtgggatttgtactatgatcagtgtcaaccccagtgga
gtaatccaagattttatatttttttgtgatgctgttgcatcttggattagtccaaaagat
gatctcagagacatgttctgtaagatccttcatggatttaaaaatcaagttggggatgaa
aattggaggcgtttctctgaccagtttcctcttcctttaaaagagcgtcttgcagcttac
tatggagtttaa
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