Gracilinanus agilis (agile gracile opossum): 123251865
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Entry
123251865 CDS
T07702
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123251865 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123251865 (HERC3)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123251865 (HERC3)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
HECT type E3
123251865 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
123251865
NCBI-ProteinID:
XP_044537122
LinkDB
All DBs
Position
6:27942445..28067033
Genome browser
AA seq
1052 aa
AA seq
DB search
MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG
SNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGHT
TTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQA
SPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL
RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQI
ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSF
KYHIVKHIFSGGDQTFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSN
SNSINSGVLQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSML
LEQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAILRLDA
NPSKVLDNWWCQVCPRYFLKLVDLYKSAVVYLLTGRKTLLIPVLFSSYITAALKLLEKLH
KVNQKVKHVEYDKFYIPEISHLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFVFD
AQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRE
LSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFS
DTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSL
QQLLDYPGEDVEEVFCLNFTICRESYGVVEEKKLIPGGDKMTVQKDNRQEFVDAYVNYVF
HLSVHEWYAAFSSGFLKVCGGKVLELFQPSELRAMIVGNSNYNWEELEESTIYKGDYSPA
HPTVKMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTTSGEEYLPVAHTC
YNLLDLPKYSSKEILNIRLTQAIDHYEGFSLA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctttaggccatcctggtggtattagcagcaatctccaa
ggaattgtgactgagccacaagcatatggatttatttctgacagaagcatcaaagaagtg
gcctgtggaggaaaccactctatttttctgctggaagatggagaagtttatacatgtggt
tcaaacaccaaaggacaattgggccatgaaagagaaggaaataagccagagcaaattgga
gctttggcagatcagcatataatccatgttgcctgtggtgagtcccatagcttggccctt
agtgaccggggacagcttttttcttggggtgcaggtagtgatggacaacttggacataca
actactgaagactctgttgcaatacccaggttaataaagaaactgaaccagcagatgata
ttacaggtttcctgtggcaactggcactgcatggctcttgcagctgatgggcaattcttc
acttggggacagaaccgccatgggcagttgggcctggggaaagaattcccttcccaagct
agcccccaaagggtgaaatccttagaggggattcctctggctcaggttgctgcaggaggg
gcacacagctttgccctgtctctctcaggagctgtgtttgggtggggaaggaacaatgct
ggtcagctgggactcagtgatgaaacagatcgacaatctccatgtcacgtgaaactctta
cgaactcaaaaagttgtttatatcagctgtggagaagaacatacagcagttctcactaag
agtggaggagtgttcacttttggcgctggttcctttggacagcttggacatgactccatg
aatgatgaagttaatccaagaagggttctagaattaatgggcagtgaagtaactcagatt
gcttgtggcagacagcacactctagcctttgtgccttcctcggggctcatctatgcattt
ggctgtggagcaagaggccagttaggaactggacacacatgtaatgttaaatgcccatct
cctgtgaagggtcactgggctgcccacaatggccaactttcatctagagctgattccttt
aaatatcacattgttaaacatatcttctcaggaggagaccaaacttttgtactttgctcc
aaatatgagaattcctctccagcagatgacttcagaattatgaatcaagcacaatataca
agtttaataaatgatgaaactatagctatttggagacaaaaattatcagagcatagcaac
tccaattcaatcaacagtggtgttctgcagatactatcctcagctgcctgctggaatgga
agtttccttgaaaaaaaaattgatgagcattttaaaactagtcccaaaattccagggatt
gacttgaattctactagagtgttgtttgagaagctgatgaactctcagcactcaatgctc
ctagaacagatcttaaaaagctttgaaagtttcctgattcctcagttgtccagttcacca
ccagatgttgaagcaatgagaatctatctaatacttcctgaatttcctctacttcaggat
tctaaatattatataacattaacccttcccctggcaatggctattctacgactggatgca
aaccctagtaaagtcttagataactggtggtgtcaggtgtgcccaagatatttcttgaag
ctagtagacctttataaaagtgcagtagtttatctcctgactggaagaaaaacactgttg
attcctgttctgtttagcagttatatcacagcagcactcaagctattggaaaaactgcat
aaggtaaaccagaaagtgaaacatgtggaatatgacaagttttatatacctgaaatttca
catcttgttgatattcaggaagactatctcatgtggttcttgcatcaagcaggaatgaaa
gttagaccatctataatgcaggatgctgtgactctctgttcttatccatttgtctttgat
gctcaagccaagaccaaaatgttacaaacggacgctgaactgcaaatgcaggttgctatc
aatggagcaaatttgcagaatgtgtttatgctgctcacattggagcctctgctggccaga
agcccattccttgtccttcatgttcgcaggagcaaccttgtgggggatgccctaagagag
ctgagtattcattccgacattgatttgaaaaagcctctgaaagtgatatttgatggtgaa
gaagcagtagatgctggtggagttacaaaggaattctttcttttgctattgaaggaactt
ttaaatcctatctatgggatgtttacctattatcaagattcaaacctcttatggttttct
gacacgtgttttgtagagcacaactggtttcacctgattggtataatctgtggactagct
atctacaacttcactgtggtagatcttcacttccccctggctctctacaaaaaattactg
aatgtaaagcctggcttggaagatttaaaggagttgtcacctactgaaggaaggagtctc
cagcagcttcttgattacccaggggaagatgtagaagaagttttctgcctcaacttcaca
atatgcagagaaagttatggagtagttgaagaaaagaagctaatacctggaggagataag
atgactgtacagaaagacaacaggcaggaatttgtggatgcttatgtcaactatgtcttc
cacttatcagtccatgaatggtacgcagccttttcgagtggttttctgaaggtgtgtgga
ggcaaagtactggaactcttccagccttcagaactcagggccatgattgtggggaacagc
aattataactgggaagaattggaagagagtacaatatataagggagattactcacctgca
catccaacggtgaaaatgttttgggaaacttttcatgaatttccactggaaaaaaagaag
aaatttcttttatttctgacaggcagtgaccggatccctatctatggaatgtcaagcctt
cgaatcatcatccagtccacaaccagtggggaggaatatttgcctgtggctcatacttgc
tacaaccttctagatctacccaaatacagcagcaaagagatcttgaatattcggctgact
caggctattgaccactatgagggatttagtttagcctga
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