Gracilinanus agilis (agile gracile opossum): 123251922
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Entry
123251922 CDS
T07702
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123251922 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123251922 (FIP1L1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123251922 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
123251922
NCBI-ProteinID:
XP_044537185
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Position
6:complement(164736718..164836995)
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AA seq
583 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGISK
PKVTETEDDSESDSDDDEDDVHVTIGDIKTGAPQYGSYGAAPVNLNIKTGGRVYGAAGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLELIPNKITAEDYTMEVTPGAEIQDGRYNLFKVQQGRTGNAEKETVLQSTKAEFTSP
PSLFKTGLPPSRNSASSQSQTSSASRKANSGIGKWQDRYGRAESPDLRRLSGTIDVIGQT
ITISRVEGRRRANENSNIQVLSERSAAEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPT
VSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAF
PHLPGSAPSWPSLVDTTKQWDYYARREKDRERERERDRERDRDRDRERERTRERERERDH
SPTPSVFNSDEERYRYREYTERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRR
HESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggggaggtggagcgcctggtgtcggagctgagcggcgggaccggtggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaagaccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaaactgcagaaaatgggatatcaaaa
ccgaaggtgactgaaactgaagatgatagtgagagtgacagtgacgatgatgaagatgat
gttcatgtcactattggtgatattaaaactggagcaccacagtatggaagctatggagca
gcacctgttaatcttaatatcaagacaggaggaagagtttatggtgcggcaggaacaaaa
gtcaaaggtgtagacctcgatgcacctggaagcattaatggagttccactattggaagta
gatttggattcttttgaagataaaccatggcggaaaccaggtgctgatctctctgattac
tttaattatggttttaacgaagatacatggaaagcttactgtgaaaagcaaaagaggata
cgaatgggacttgaattaataccaaataaaattacggccgaagactatactatggaagtt
acaccaggtgcagagatccaagatggcagatacaatctttttaaggtacagcagggcaga
actgggaatgcagagaaggaaacagtgctacagtctaccaaagctgaatttacatctcct
ccttctctattcaaaacaggacttcctccaagcagaaacagcgcctcttctcagtctcag
acaagttctgcctccagaaaagctaattcaggcatcgggaagtggcaagatcgatatggg
agagccgaatcacctgatttaaggagattatctggcacaatagatgtaattggtcagact
atcactatcagccgagtagaaggaagacggcgggcaaatgaaaatagcaatatccaggtt
ctttccgagcgatctgctgctgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctcctactcacctcccaccacctccatttcttcctcctcctccaact
gtcagcactgctccacctctgattcccccaccaggtattccaataactgtaccacctcca
ggttttcctcctcccccaggagctcctcctccgtctcttataccaacaatagaaagtggg
cattcttctggatatgatagtcgttctgctcgtgcatttccatatggcaatgttgccttt
cctcatcttcctggttctgctccttcatggcctagtcttgttgacactaccaagcagtgg
gactactatgccaggagagagaaagacagagagagagagagagaacgagaccgagagaga
gaccgtgaccgggatcgggaaagagaacgtaccagagagagagagagggaacgtgatcac
agcccaacaccgagcgttttcaacagtgatgaagaacgatacagatacagagaatatacg
gaacgaggctatgagcgtcatagagcaagtcgagaaaaagaagagcgacacagagaaaga
agacacagagaaaaagaggagacaagacacaagtcatctcgaagcaatagcagaagacgc
catgaaagtgaagaaggggacagtcacaggagacataaacacaaaaaatcaaaaaggagc
aaagaaggaaaagaagctggcagtgaacctgccccagagcaggagagcactgaggctgcc
cctgctgaatag
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