Gracilinanus agilis (agile gracile opossum): 123252417
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Entry
123252417 CDS
T07702
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gas04990
]
123252417 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
gas04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
123252417 (LIMCH1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
123252417
NCBI-ProteinID:
XP_044537677
LinkDB
All DBs
Position
6:complement(173915316..174148126)
Genome browser
AA seq
1539 aa
AA seq
DB search
MKIWVQISAKIFVSCQVTGRSFGDRDFRTGLENGILLCELLNAIKPGLIKKINRLPTPIA
GLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRVTVKSIDCSRKLKNVLVTIYWLGKAA
NSCTAFSGTPLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYIDCWDSERSDSLSPPRHG
RDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLPHRKLPDVKKDDMSARRTSH
GEPKSAVPFNQYLPNKSNQTAYVPAPLRRKKAEREEYRKSWSTATSPLGGERTFSYPETI
EEEQNEVGAHCEESEADKSDPSGKPSDTGLESNRKNGKEQIPPGGTKETVAQRATQKDHE
EIRRRRRLEQAGIKIMPAAQRFASQKQINEEKETVPDIILRKENPFLYGHESEPEDGVEC
RLPDLEKDDFAARRARMNQTKSTVPLNQLLFGPYIKKESDGIKQPLKGASQKKSQGSTRN
EVHQEEVKKTGISKENQLQPPENACEAEESKKAPDIQKDDLAKRKIQSSHFSSHQMATSF
VKISTITEADLETWDRLKVSGKMSDEDSDHNCTPTPSPEIQAETAIRDDFASRKARAYQK
ASGPKQKFVHFGPVTEIDQQKWRKLSIGKVGPKEKIHEIPSDGDKMRVCHVAPDSAAPHS
SEDDRFPRGQNDSSKLACFSVDENCKGSPASTVDEVQTQKTYILEEYLGNSKEAISNQLP
QYDQKEDRLTKGDFEPELKNGRYGSRSQQLASSVAPVNETTGAEENLEKMTTRGVQPRHE
ARGHRKVPDPQKDDMMARRTGAFLKHTVSNSNRFLPVPFAKQQDGEEPTKGLQKKEERYG
PRTAVSDDAESMSMLDMRCEEEATVQPHSKARQEQLQFINSQLKEEDDKWQDDLARWKSR
RRSASQDLIKKEAERKKMERLLAGGDGTSERRKSIKTYREIVQEKERRERELHEAYKNAR
SREEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNSSSPNDPNPMKYLRQQSLP
PPKFTATVETTIARPSEPDPNVSAGSASPSKTVVPKAVPMLTPKPYSQPKNTQHVLKTFK
VDEKVSVNGETFNGVEEEKERECTTATFSPSLTRSQRFEGVARVDGSPVELKQDTSSIEI
SIKKANSLNRELTTSTTEEAELTPQKDEIDCGQEERRSTGRTSPGLLHGNVFWGHSAGLL
SLSFSLKELILRICKFLRSNFWAWDPEEERRRQEKWQLEQERLLQERYQKEQDKLKEEWE
KAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSADQLSTSSSVTEGNGPVNKMESEDSK
EEEKRQRQLLEEENNDLLPKNSKSDVLEETKSGSQVTPAHPENCVPKGIHQDHQLSTAEL
GTPDRRLNLELSQDTSWNQPWSPASSHALEDVKQKTLPMDQSINHQVASPSERRKTSPHE
NFRAGQLSPCSPTPPGQSPNRSISGKKLCSACGLPLGKGAAMIIETLSLYFHIQCFRCGI
CKGQLGDSVSGTDVRIRNGLLNCNDCYIRSRSAGQPTTL
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctgggttcaaatctcagccaagatatttgtcagttgtcaagtaactggcaga
agttttggtgacagagattttcgaacaggactagaaaatggcatcctgctctgcgagctg
ctgaatgctattaaaccaggactcatcaaaaagatcaatagattgcccacccccattgca
ggattggacaatatcatcttattcttaagaggctgcaaggagctcgggcttaaagaatct
caactctttgacccaggtgatctccaggacacttcaaatagagtaacagtcaagagcatt
gactgtagtagaaagctgaaaaatgtattagttaccatttactggctggggaaagcagct
aacagctgcacagcattcagtggaaccccactgaacctgaaggagtttgaaggattattg
gcacagatgcgaaaggaaactgatgatattgaaagccctaaacgaagcatccgagacagc
ggctatatagactgctgggattctgagcgcagtgattccctctctccaccccggcatggt
cgagatgattcttttgacagtctggactcatttggctcacgttctcagcagacaccctcc
ccagatgtagtcctcagaggaagtagcgatggcagaggaagtgactcagaatctgacttg
cctcatcgaaagctgcccgatgtaaagaaggatgacatgtcagcaaggaggacttctcat
ggtgagccgaaatcagcagtgccttttaaccagtacctccccaacaagagtaaccagacc
gcttatgtacctgctcctctgaggaggaagaaggctgagcgagaggagtaccgaaaaagc
tggagtactgcgacctcacccctaggaggagagagaactttcagctaccctgaaaccata
gaggaagagcaaaatgaagtgggggctcattgtgaagagtcagaggccgacaagtcggat
cctagtggaaagccctcagatacggggttagaatcgaacagaaaaaatggtaaggaacaa
attcctccagggggcacaaaggaaacagtggcacagagagccacacaaaaagatcatgaa
gagatcagaagacgcagaaggttggagcaagctggtatcaagatcatgccagccgcacag
cgttttgccagtcaaaagcaaataaatgaagagaaagaaaccgttccagacattatcctt
cgaaaagagaacccttttctgtatggccatgagtctgagccagaagatggagtggaatgc
agacttcctgatctagagaaggatgactttgctgctcggagagcaaggatgaatcaaacc
aagtccacagtgccactgaatcagttgctatttggaccttatattaaaaaagagagtgat
ggtatcaaacagcccttaaagggagcatcacagaagaaaagtcaaggatccacaagaaat
gaagtacaccaggaagaagtgaagaaaactgggatttccaaagaaaaccagctacagcct
ccagagaatgcatgtgaggcagaagaatccaagaaggctcctgatatccagaaggatgac
ctagctaagcggaagattcagagtagtcatttctcctcacaccagatggccacaagtttt
gtgaagatttcgacaataacagaagcagacttggagacatgggatagattgaaagtgtca
ggaaagatgagtgatgaagattcagaccacaactgtaccccaaccccctcacctgaaatt
caagctgaaactgcaattcgtgatgactttgcaagtcgcaaagcaagagcctaccaaaag
gcttctggccctaagcaaaagtttgtgcactttggaccagtgacagagatagatcagcag
aaatggaggaaacttagtattggcaaggttggcccaaaagagaaaatccatgagattcct
agtgatggggataagatgcgtgtttgtcatgtggccccagattcagcagctcctcacagc
tcagaggatgacagattcccccgtggacagaacgattccagcaaactagcctgttttagc
gtagatgaaaattgcaaagggagccctgcatctactgtggatgaggttcagacgcagaaa
acctacatcttggaggaatatctgggaaacagcaaggaagccatatccaaccagctgcca
cagtatgaccaaaaagaggatagacttactaaaggagattttgagcctgagctgaagaat
ggaagatatgggagcagaagccaacaactagcaagctccgtcgctcctgtgaatgagacc
acaggggcagaagagaatcttgagaagatgacaacgcgtggtgtccagcctcgccatgaa
gcccgagggcacagaaaagtgcctgacccacagaaagatgacatgatggctagaagaact
ggcgcattccttaagcacactgtatccaactcaaaccggttccttccggttccatttgca
aagcagcaggacggggaggaacctaccaagggacttcaaaagaaagaggagagatacggt
ccccgaactgctgtgtctgatgacgcagagagcatgagcatgcttgatatgcggtgtgaa
gaggaagccactgtgcagcctcacagcaaggctcggcaggagcagctgcagtttatcaac
agccagctgaaagaagaggatgacaaatggcaagacgacctggctcgttggaaaagccgt
agaagaagtgcatctcaggacctaatcaagaaagaagccgagaggaaaaaaatggaaaga
ttattggctggaggagatgggacaagtgaacgaaggaaaagcatcaagacctacagagag
attgtgcaggaaaaggaaaggagagagagagagctccatgaagcatacaagaatgcccgt
tcccgtgaggaggcagaggggatcctccagcagtacattgaaaggtttaccattagtgag
gccgtcctggagcgcttggagatgccaaaaattctggaaagaagccattcaacagagcca
aactcatcttccccgaacgacccaaatcccatgaaatacttgcggcagcagtcactgcct
cctcccaaattcactgccactgttgaaacgaccattgctcgccccagtgaaccagacccc
aacgtttcagcaggcagtgcgtctccgagcaaaactgttgttccaaaagcagtgcctatg
ctgacaccgaagccttactcccagccgaaaaacacacagcacgttttgaaaacctttaag
gtagatgaaaaagtcagcgtgaatggagaaacttttaatggcgtagaagaagagaaagaa
agagagtgtacgacagcgacattttccccttcgttaactagatctcagagatttgaaggt
gtggccagagtggatggttccccagtagaactgaagcaagacaccagtagcattgagatc
agtataaagaaggctaactcactgaacagagaattaacaacatccaccactgaggaagct
gaactgacccctcaaaaggatgaaattgattgtggacaagaagaaaggaggagcacagga
cgtacctcaccaggtttgctccatggaaatgtgttttggggtcattcagctgggctttta
agcctgtctttttctttgaaggaactaattctgaggatctgcaagtttctgcgttccaac
ttttgggcatgggatccagaggaggagcgccgccggcaggagaaatggcaacttgagcaa
gaacgtttgcttcaggagagataccagaaggaacaggacaaactgaaagaagaatgggag
aaggcacaaaaggaggtagaagaagaagaacgtagatattatgaggaggaacgcaagata
attgaagacactgtggttccattcacaatttcttcaagttcagctgatcagctttctacc
tcttcctctgtcacggaaggaaatgggccagtgaataagatggaatcagaggacagtaaa
gaggaagaaaaaaggcaaagacaactcttggaggaagaaaacaatgacttgctgccgaag
aatagcaaaagtgatgttttagaagaaacaaaaagtggatcacaggtgaccccagcacat
ccagagaactgtgtaccaaaagggattcatcaggatcatcagttgtcaacagcagagctt
gggacaccagaccgaaggctgaacttagagttatctcaggacacatcatggaatcagcca
tggtcacctgcctcatcacatgcattagaagatgtgaaacaaaaaaccctccccatggat
caaagcatcaaccatcaggttgcctctcctagtgagagaaggaagaccagtcctcatgag
aatttcagagctggacagttatccccatgctctcctacccctcctggccaatctcccaac
aggtctataagcggaaagaagttatgttctgcttgcggacttcctctggggaaaggagct
gccatgatcattgaaacgcttagtctttattttcacatccagtgcttcaggtgtggaatc
tgcaaaggacagcttggagattcagtgagtgggacagacgtcaggattcgcaatggtttg
ctcaactgcaatgactgttacatccggtccagaagtgctggtcagccgacaacattgtga
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integrated database retrieval system
