Gracilinanus agilis (agile gracile opossum): 123252472
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Entry
123252472 CDS
T07702
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05016
Huntington disease
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123252472 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
123252472 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123252472 (HTT)
04131 Membrane trafficking [BR:
gas04131
]
123252472 (HTT)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123252472 (HTT)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123252472 (HTT)
Membrane trafficking [BR:
gas04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123252472 (HTT)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
123252472 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_ECM29
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
123252472
NCBI-ProteinID:
XP_044537706
LinkDB
All DBs
Position
6:complement(219591758..219788600)
Genome browser
AA seq
3128 aa
AA seq
DB search
MARELYVADPCSTGFEKIFGLDMVSVMPRDVGKGEMMEIMEKLLLLLLLGDSEAEEALDL
FCIAPEDRRKKELSTTKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDA
ESDVRMVADECLNKVIKALMESNLPRLQLELYKEIKKNGASRSLRAALWRFAELAHLVRP
QKCRPYLVNLLPCLTRISKRTEESVQETLAAAIPKIMASFGNFANDNEIKVLLKAFIANL
KSSSPTIRRTAAGSAVSICQHSRRTQYFYTWLLNVLLGLLVPVEEEHSTLFILGVLLTLR
YLIPLLQQQVKDMSLKGSFGVTRKETEISPSTDQLIQVYELTLHYTQHQDHNVVTGALEL
LQQLFKTPPAELLQALTTAGGFGQVNVTKEEFSRSRSGSIVELIAGGGSSCSPVLSRKQK
GKVLLGEEEGLEDDPESRSEVSSATFAASMKSEITGELASSSGVSTPVSTSSAADSTGHD
IITEQPRSQHTLQSDPVDLTGCDLTSAATDGDEEDMLSRSSSQISAVPSDPAVDMNDGTQ
ASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGAESQYSGMQIGQLQDEDDETSNVLPDET
PDSFRDSTIALQQPHLLKSTGHSRQPSDSSVDRFLSKDEAAELGDHESKPSRVKGDIGHF
TDTNLAPLVHCVRLLSASFLLTGEKGALVPDRDVRVSVKALAVSCVGAAVALHPESFFSK
LYKTPLETMEHPEDQYVSDVLNYIDHGDPQIRGATAILCGTIIYSILNKSRFSVENWLTA
VRNSTGNTFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSCFSELGLQLIIDV
LTLRNSSYWLVRTELLDTLAEIDFRLISFLEAKADHLHKGSHHYTGLLKLQDRVLNNVVI
YLLGDEDPRVRHVAASSLIRLVPKLFYNCDQGQTDPVVAVARDQSNVYLKLLMHETQPPS
HFSVSTITRTYRGYNLLPSITDVTMENNLSRVIAAVSHALTTSTTRALTFGCCEALCLLS
TAFPVCIWSLGWHCGVPLLSPSDESRKSCTVGMATTILTLLSSAWFPLDLSAHQDAIILA
GNLLAASAPKSLKNPWTTEDDANPGAMKQEEPWPALGDRVLVQMVEQLFSHLLKAINICA
HVLDDVTPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKKGNEASPASRSS
DPSGPAITSKSSTLGSFYHLPSYLKLYDVLKATHANYKVTLDLQNSSEKFGGFLRAALDV
LSQILELATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFGTNLASQYDGLSS
KPSKSQGKAQRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDTSGWFDV
LQKVSTQLKTNLTSVTKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLA
QLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQ
IIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVAVS
MLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHEALGV
LNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVGTVQLWISGILAILRVLISQSTEDIVL
SRIQELSFSPYLISCQVIKKLRDGGSSLPTPEDQSEVKQAKCLPEETFSRFLLQLVGILL
EDIVTKQLKVEMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTGDGSDGSF
YTLESLSELVRSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKRHSLSSTKLLSPQ
MSSDGEDSHLASTLGVCNREIVRRGALILFCDYVCQNLYDSEHLTWLIVNHIQDLISLSH
EPPVQDFISAVHRNSAASGLFIQAIQSRCENLSSPTTLKKTLQCLEGIHLSQSGAVLMLY
VDKLLCTPFRVLARMVDTLACRRVEMLLAANLQNSMSQLPVEELNRIQEYLQKSGLAQRH
QRLYSLLDRFRHTVAPETASPSPVVTSHPLDGENHLSLEMINPDQDWYVSLVKFQCCTKS
DSALLEGAELVNKIPPGELTPFMLSKEFNLCLLAPCLSLGVREISSGQSSSLFETARSVT
LDRVASLVQQLPSSHQVFQPLLPIETSAYWNQLSDLFGNTVIYQSVTTLACALAQYLVLL
SKLPSHLQLPPEKESDILKFVVAALEALSWHLIHEQMPLSMDLQAVLDCCCLTLQLPALW
NMLSSIEYVTHVCSLIHCVRFILEAIAIQPGDQLLSPERRKNTPRGISEDEVDSDVQVPK
YITAACEMIAEMVAALQTVLSLGHKRNNGIPAFLTPVLKNIIISLARLPLVNSYTRVPPL
VWKLGWSPKPGGEFGTTLPEIPVEFLQEKEIFKEFIYRINTLGWTSRTQFEETWATLLGV
LVTQPIVMDQEESQQEEDTERTQINVLAVQAITSLVLSAMTLPVAGNPAVSCLEQQPRNK
ALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDNIPTHHLYQAWDPVPSLSPAMSGALISH
EKLLLQINTEREMGNMSYNLGQVSIHSVWLGNNITPLREEEWDEDEEDDGDLPAPSSPPT
SPINSRKHRAGVDIHSCSQFLLELYSQWILPSSSAKRTPVILISEVVRSLLAVSDLFTER
NQFEMMYLTLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLETTLRST
HLPSKIGALHGILYVLECDLLDETAKQLIPIISDYLLSNLRGIAHCVNLHSQQHVLVTCA
AAFYLMENYPLDVGPEFSAAVIQMCGVMLSASEESTPAIIYHCVLRGLERLLLSEQLSRL
DGESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPNPTAPDSESVIVA
MERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMAT
VVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWVSAILP
HIISRMGKSEQVDINLFCLVAIDFYRHQIDEELDRRAFQSVFEVVASPGNPYHRLLTCLQ
NVHKIAAC
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagagctatacgttgctgatccctgctcaacaggctttgagaagatttttggg
cttgacatggttagtgtgatgccacgtgatgtaggaaaaggagagatgatggagattatg
gagaaattgttgctactgctgcttctgggagacagtgaggctgaagaggcattagatttg
ttctgcattgccccagaggacagaagaaagaaagaactttcaactactaagaaagaccgg
gttaatcattgcctgacaatatgtgaaaatatagtggctcagtctctcagaaattcccca
gagtttcagaaacttttaggcattgctatggagctctttcttctgtgcagtgatgatgca
gaatcggatgtcagaatggtagctgatgaatgtctcaataaagttataaaagctttgatg
gaatccaatcttcctaggttacagttagagctctataaagaaataaaaaagaatggtgct
tctcgaagtctgagagctgctctctggagatttgctgaacttgctcatctggttcgacct
cagaagtgcagaccatatttggtaaaccttttgccttgtctgactcgaataagcaagcga
acagaagaatctgtacaagagactttggcagctgctatacccaaaattatggcatctttt
ggaaactttgcaaatgacaatgaaatcaaggttttattaaaagctttcatagcaaatctc
aagtcaagttcccctacaatacgacgaacagcagctggatcagcagtgagcatctgccag
cattcaaggaggacacagtatttttatacctggttacttaatgtacttttaggcttattg
gttcctgttgaggaggagcattctactctttttattcttggagtattgctcactttgagg
tatttaattcccttgctccaacagcaagtcaaggacatgagtttgaaagggagctttggg
gtcacacgaaaagaaacggaaatatcaccttctacagatcagctcatccaggtatatgaa
ttgaccttgcattacactcagcatcaagaccataatgttgtaactggagcattagaacta
ttgcagcaacttttcaaaacacctcctgctgagcttctccaagccctgactactgcaggt
ggttttggacaggtcaatgtgaccaaagaagaatttagtagaagtcgcagtgggagtatt
gtagaacttatagctggaggggggtcttcatgcagccctgttctttcaagaaagcaaaaa
ggtaaagtgctcttaggagaagaagaaggcttagaagatgacccagaatcaaggtctgaa
gtgagcagtgcaacatttgcagcctcaatgaagagtgaaatcacgggagaattggcttct
tcatcaggtgtgtcaactcctgtctccacaagttcagccgctgattccacaggtcacgat
atcatcacggagcagcccagatcacagcatactctgcagtcggaccccgttgatctgact
ggctgtgacttgacgagcgcagccacagatggggatgaagaggatatgctgagtcgcagc
tcaagccagatcagcgccgtcccgtccgaccctgccgtagacatgaacgatgggacccag
gcttcctcgccaatcagtgatagttcacagaccacgacagaggggcccgattcagctgtg
accccttcagacagttctgaaattgtattggatggtgctgaaagccaatattcaggaatg
cagattggacagttacaggatgaagatgatgagacatcaaatgttctccctgatgagact
ccagatagtttcagagactctacaattgcacttcagcagcctcatctcctgaaaagcacg
ggacatagtagacagccatctgacagcagcgtcgacagatttttatcaaaagatgaagct
gcggagctaggtgatcatgaaagcaagccttctagagtaaaaggagatattggacacttc
actgatactaacttggcacctttagtccattgtgttcggctactttctgcttccttcttg
ctcactggagaaaaaggtgcattggttccagatagggatgtaagagtaagtgtgaaagct
ttggcagtgagttgtgttggagcagctgtggcccttcatcctgaatctttctttagcaaa
ctctacaaaacacctcttgagactatggaacacccagaggatcaatatgtctcagatgtt
ttgaactatattgatcatggagacccacagatccgaggagctactgctattctttgtggg
accattatctactctattcttaataaatctcgcttcagtgtggaaaactggttgacagct
gtcagaaattcaacaggtaataccttttccctggtggactgtatccctttattgcagaaa
actttgaaagatgaatcttcagttacctgcaagctggcttgcacagctgtgaggcattgt
gtcatgagtttatgcagcagttgctttagtgaattaggattacagttgatcattgatgtc
ttaactctgagaaatagctcctactggttggtcaggacagaacttttggatactcttgca
gaaattgactttaggttaattagctttttggaggcaaaagcagaccatttacacaaagga
tctcatcattatactgggcttttaaaattgcaggatcgagtgctcaataatgttgtcatc
tatttacttggagatgaagatcctagggtgagacatgttgctgcatcttcattaataagg
cttgttccaaagttgttttataactgtgaccaaggacagactgatccagttgtggctgta
gcaagggaccaaagcaatgtctacctgaaacttctaatgcatgagactcagcctccctct
cacttttcagtcagcaccattaccagaacatatagaggttataacttgcttccaagtata
actgatgtgacgatggaaaataacctttccagagttattgcagcagtttcccatgcattg
acaacatcaactacacgagcacttacatttggctgttgtgaagctttgtgtcttctttct
actgcttttccggtttgcatttggagtctaggatggcattgtggggttcctctcctgagt
ccctcagatgaatctaggaagagctgtacagttggaatggctacaacaattctcaccctg
ttgtcctcagcttggttccccctggatctgtcagcacatcaagatgctattatcttagct
gggaatttgctcgcagctagtgcccctaaatctttgaaaaacccatggactacggaagat
gatgccaatccaggagccatgaagcaagaagagccgtggccagctctgggagaccgagtt
ttggttcagatggtggaacagctcttttctcatttgctgaaagccattaatatctgtgca
catgtgttggatgatgttactcctgggccagcaataaaggcagccttaccctctctaacc
aatccaccttctctaagtccaattcgtcgaaaaggaaaagaaaaagaaccaggagagcag
gcctctgtaccactgagtcccaaaaaaggcaatgaagctagtccagcttctaggtcatct
gatccttctggacctgctataacaagcaaatcttcaacattgggaagcttctatcatctt
ccttcttatctcaagttatatgatgttttaaaagctactcatgctaactataaggttaca
ttggatcttcagaatagcagtgaaaagtttggggggtttcttcgggctgctttggacgtc
ctttcacagattcttgaactagccacactgcaggatattgggaagtgtgttgaagaaatc
ttgggatacctgaaatcttgtttcaatagagaacctacaatggctactgtttgtgttcag
cagttgttgaagactctatttgggactaatctggcatcacagtatgatggcttatcttcc
aaacccagcaaatctcaaggaaaagcccagcgtttgggttcttctagcttgcgtcctggc
ctgtatcattattgcttcatggcaccatatacgcactttacacaggctttggctgatgct
agtttgaggaatatggtccaggcagaacaagaacatgatacttctggatggttcgatgtg
ctccaaaaagtatctacacaattgaaaaccaatcttacaagtgtgacaaaacaccgtgca
gataagaatgccattcacaaccacattcgtttatttgagcctcttgtcatcaaggcttta
aaacagtacaccacaacaacatctgtgcagttgcagaggcaggttctagacttgctggca
caactggttcaattacgggttaactactgccttctggattctgatcaggtgtttattgga
tttgtgttaaagcagtttgaatacattgaagtgggccagtttagggagtcagaggcaatt
attccaaatatcttcttcttcttagtattattgtcttatgagcgctatcactcaaagcaa
atcattggaattcctaaaataattcaactctgtgatggcatcatggcaagtggaaggaaa
gctgtcacacacgccataccagctctgcagcccatagttcatgatctctttgtgttaagg
ggaacaaacaaagcagatgctggaaaagagcttgagacacaaaaagaggtggctgtgtcc
atgttactaagacttattcagtaccatcaggtattagagatgttcatcctagtcctacaa
cagtgtcacaaggaaaacgaagacaaatggaaaagattatctcgacaaatagctgacatc
attctcccaatgttagcaaaacaacagatgcatattgattctcatgaagctcttggagta
ttgaacactttatttgaaatactggctccttcatccctccgtcctgtagacatgctttta
cgaagtatgtttgttacacccaatacaatggcttcagtgggtactgttcagttgtggata
tcaggcatcctagctattctaagagtgcttatatctcagtcaactgaagacattgttctt
tctcggattcaggaactttctttctctccttatttaatttcatgccaagtaattaaaaaa
ttaagagatgggggcagtagcttaccaacaccagaagatcagagtgaagtgaaacaagct
aagtgtttgccagaagaaacattttcaagatttctgttacagctggtgggcattcttttg
gaagacattgttacaaagcagctgaaagtggagatgaatgagcagcagcacacgttctat
tgtcaggaactgggcacactgctcatgtgcctgatacacatcttcaagtcaggaatgttc
aggagaatcactgcagctgccactagactctttacaggggatggctctgatggcagcttt
tataccctggaaagcctgagtgagctggtgcgatctatgattcctacccatccttcctta
gtgctcctgtggtgtcagatccttctgcttgtcaactataccaactacaactggtggtcc
gaagtgcatcagacgcccaaaaggcacagtctttccagtacgaaactactcagccctcag
atgtctagcgatggtgaggattcccacttggcatccacacttggtgtgtgcaatagagag
atagtacgaagaggcgccctcattcttttctgtgattatgtttgtcagaacctatatgat
tcagaacatttaacttggcttattgtcaatcatattcaagatctgatcagtctctcccat
gaacctccagtacaagactttattagtgcagtccacaggaattcagctgctagcgggctt
ttcatccaggcaattcagtctcgatgtgaaaacctttcatctccaacaactttgaagaaa
accctgcagtgcctggagggcattcacctcagccagtcgggcgctgtgctcatgttgtac
gtggacaaacttttgtgtacaccattccgtgtgctggctcgcatggttgacacacttgct
tgtcgtcgagtagaaatgcttttggctgccaatttacagaacagcatgtcacagttacct
gtggaagaactgaatagaatccaggaataccttcaaaaaagtggattagctcagagacac
caaagactctattccctgctggacaggtttcgtcatactgtagcaccagagacagctagc
ccttctcctgtagtcacttcacaccccctggatggggaaaatcacttgtcactagagatg
ataaatccagaccaagactggtatgtgtctctagtcaaatttcagtgttgcactaagtca
gactcagcactgctggaaggtgcagagctagttaataagattcctcctggtgaactgacc
cccttcatgctgagtaaggagttcaatttatgcctcttagctccttgcttaagtcttggt
gtccgtgaaatctccagtggtcagagtagcagcctctttgagacagcccggtcagtgacc
ctggaccgtgtggccagccttgtacagcagcttccatccagccatcaagttttccagccc
cttctgcccattgagacttcagcctattggaatcagctaagcgatctctttggtaatact
gtgatttatcagtcagttactacactggcctgtgcccttgctcagtacttagtactgctt
tctaagttgccaagccatcttcagcttcctcctgaaaaagagagtgatattctgaaattt
gttgtggcggcacttgaggccctctcatggcacttaatacatgagcagatgccattaagt
atggatctgcaggctgtcctggattgctgctgtctaactttgcagctgcctgctctttgg
aatatgttgtcatcaatagaatatgtcacccacgtgtgctccctaattcattgtgttcga
tttattctagaagcaattgcaattcaacctggggatcaacttcttagtccagaaagaagg
aagaataccccaagaggaatcagtgaagatgaagttgattcagatgtacaggttcccaag
tatattacagctgcttgtgaaatgatcgcagaaatggtggcagcattacagaccgttttg
tctttgggtcacaagaggaacaatggaatcccagctttccttactcctgtactcaaaaac
atcatcatcagccttgctagactgccattagttaacagctatactagagtgcctcccttg
gtatggaaactaggatggtcacctaaacctggaggggagtttggcacaacacttcctgag
atccctgtagaatttcttcaagaaaaagagatctttaaagagttcatttatcgtattaat
accttgggatggacaagtcgcactcagtttgaagagacctgggccaccctgcttggcgtc
cttgtaactcagcccattgtgatggatcaagaagagagccaacaggaagaagatacagag
agaacccaaatcaatgttcttgcagtacaagccattacatcattggtgttaagtgcaatg
acccttcctgttgcaggcaatccagcagttagctgcttggaacaacagcccaggaacaaa
gctcttaaagctctggatacaaggtttgggagaaaactgagtgttatcaggggaattgtt
gagcaagagattcaagcaatggtttcaaagagagacaacattcctacacatcacttgtac
caggcttgggatcctgttccatctctgtctccagctatgtcaggtgcccttatcagccat
gaaaaacttctgctacagatcaatactgaacgagaaatggggaacatgagttataaccta
ggacaggtctctatacactctgtgtggctcggaaataacatcactccactgagagaagaa
gagtgggatgaagatgaagaagacgatggtgaccttcctgccccttcttcacctccaaca
tctccaataaactccaggaaacaccgggctggagttgatatacattcctgttcgcagttt
ttgcttgaattatacagtcagtggatactcccatcgagttcagccaaaagaactccagtc
attctgatcagtgaagtagtaagatctctcctggcagtttcagacttgtttacagaaagg
aatcaatttgagatgatgtacttgacactgacagagttacgaagggtgcatccttctgaa
gatgaaattctcattcaatatttagtgccagccacttgtaaagctgcggctgttctgggg
atggataaagctgttgctgagccagtgagtaggctgctggagaccacactccgaagcacc
catttgccgagcaagattggagcattgcatggcatcctctacgtgcttgaatgtgaccta
cttgatgaaacagcaaagcagctcattccaattatcagtgattacctcctttcaaatctc
agaggaatcgctcattgtgtgaatttgcacagccagcagcatgttctggtgacctgtgct
gccgccttctaccttatggagaattaccccctggatgtaggcccagagttttctgctgca
gtaatacagatgtgtggggtgatgctttctgccagtgaagaatccactccagccattatt
tatcattgtgtgctgagaggtttagaacgacttcttctttcagagcagctttccaggctg
gatggagagtccttagttaagctcagtgttgatagagtgaatgtgcatagtcctcaccga
gccatggcagccctgggcttgatgttaacttgcatgtatacaggaaaggagaaaatcagc
cctggcagaacctcagatcccaaccccactgccccagacagtgagtctgtcattgttgca
atggagcgagtatctgttctctttgataggatcaggaaaggatttccttgcgaagctaga
gtggtagcacggatccttcctcagtttctagatgattttttccctcctcaggatgtaatg
aacaaagttattggagaatttctatcgaaccagcagccatatccacaattcatggcaact
gttgtatataaggtgtttcagacgttgcacaccacaggacaatcatctatggtcagagat
tgggtgatgctctctctctcaaacttcactcagaggaccccagtcgcaatggccatgtgg
agtctctcctgttttttcgtcagtgcttccactagtcagtgggtttcagcaatccttcca
cacatcatcagcaggatggggaaatcggaacaagtggacattaatcttttctgtctggtg
gccatagacttttacagacaccagatagatgaggagctagatcgcagggcctttcagtct
gtgtttgaggtggtagcatctccaggaaatccctaccaccgactgctgacttgtttgcaa
aatgtccacaagattgcagcctgttga
DBGET
integrated database retrieval system
