Gracilinanus agilis (agile gracile opossum): 123252905
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Entry
123252905 CDS
T07702
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04136
Autophagy - other
gas04140
Autophagy - animal
gas04211
Longevity regulating pathway
gas05010
Alzheimer disease
gas05014
Amyotrophic lateral sclerosis
gas05016
Huntington disease
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123252905 (ATG13)
04136 Autophagy - other
123252905 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
123252905 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123252905 (ATG13)
05014 Amyotrophic lateral sclerosis
123252905 (ATG13)
05016 Huntington disease
123252905 (ATG13)
05017 Spinocerebellar ataxia
123252905 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
123252905 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123252905 (ATG13)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123252905 (ATG13)
Membrane trafficking [BR:
gas04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123252905 (ATG13)
Atg1 complex
123252905 (ATG13)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123252905 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
123252905
NCBI-ProteinID:
XP_044538083
LinkDB
All DBs
Position
6:271412212..271451019
Genome browser
AA seq
550 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGREYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIVIDHFVDRPYPSSSPMHPCNYRTTGEDAGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVSKAYFQTPTPVVTDTLRVPMAGLAFSHQLASS
RLAYQPAALGVGSAELAHPVVFAAGSSAAHPHQLMVPGKEGGVPLAPSQPAHGAQADHEK
MATCTPSDGAHYIVTPSSSEDTETVSNSSEGRASPRGVLEAVLVRKVGALVNNSVDQVTM
TNLDIPFAMFAPKNFELEDNDPMVNPPDSPDTESPLQGSLHSDGSSGGSSGNTHDDFVIV
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVK
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gccctgaagactgtccaggtgatagttcaggcacggctgggagagaagatttgtactcgc
tcgtcatcctctccaacgggatctgactggtttaacttggccatcaaggatattccggag
gtcacacatgaggccaagaaagcattggcagggcagctgcccgctgtggggaggtcaatg
tgtgtggaaatctctctcaagacttctgagggagattccatggaactagaaatttggtgt
cttgaaatgaatgaaaagtgcgacaaagaaattaaagtttcctacactgtgtacaatagg
ctgtctttactgctgaagtctctgcttgctatcactagagtaacaccagcctaccgactc
tccaggaagcagggccgggaatatgtcatcctttacagaatatactttggagaagtccag
ctgaacggcttaggagaaggtttccagactgtccgcgttggtacagtaggcactccagta
ggcaccatcacactgtcctgtgcctacagaattaacctggccttcatgtctaccaggcag
tttgagaggaccccacctatcatggggattgtcattgatcattttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaactacaggacaactggtgaggatgccggggta
acgtacccatctgtggaagactcccaggaagtgtgcaccacctctttctccacttcccct
ccatcccagtgtgtgttcactgtcagtaaggcatattttcagacccctactccagtggtg
acggataccctgagggtccccatggcaggactggccttttcccaccaacttgcaagctct
cgccttgcctatcaacctgctgctctgggagttggatcagctgagctggctcacccagtg
gtctttgctgctggctccagtgctgcccaccctcaccagttaatggttccagggaaggaa
ggtggggtgcccctggctcccagccagcctgcccatggcgcccaggccgaccatgagaag
atggcaacctgtaccccttctgatggtgcccactacatcgtcactccttccagcagtgaa
gacaccgaaactgtatccaacagcagcgagggccgggcgtccccccgtggtgtcctagag
gctgtcttggttcggaaagtgggagctcttgtcaacaattcagtggatcaggtaactatg
accaatttggacatcccctttgccatgtttgctcccaagaactttgagctcgaggataat
gatcccatggtaaatcctcccgactccccagacactgaatctcctctccaaggcagcttg
cactctgatgggtccagcggcggcagcagcgggaacacgcacgatgactttgtcattgtt
gacttcaagccggccttctcgaaagatgatattctccccatggatttagggaccttttac
cgggagtttcagaatccccctcagctgagcagcctctccatcgacattggggctcagtcc
atggccgaagacctggactcgctcccagaaaagctggccgtgcatgagaagaatgtcaaa
gagtttgatgcctttgtggagactctgcagtaa
DBGET
integrated database retrieval system
