Gracilinanus agilis (agile gracile opossum): 123252930
Help
Entry
123252930 CDS
T07702
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123252930 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123252930 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123252930 (NUP54)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123252930 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
AKAP7_NLS
XhlA
Phage_tail_terminator_7
Motif
Other DBs
NCBI-GeneID:
123252930
NCBI-ProteinID:
XP_044538118
LinkDB
All DBs
Position
6:19862257..19886085
Genome browser
AA seq
504 aa
AA seq
DB search
MAFNFGAPAGGTASAATPAAPAGTFGGFGTTTTTTTAGSAFSFSAPTNTGTSGLFGATQN
KGFGFGTGFGTTAGTSTGLGTGLGFGTFNTQQPQNTLGGLFSQPTQAPVQSNQLINTASA
LSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVDFTQENPFCRFKAVGYSCMPN
NKDEDGLVVLIFNRKETDIRSQQQQLIESVHKILGGNQTLSVNVEGVKTLPDDQTEVVIY
VVERSPNGTSRRVTATALYTHFEQANIKTSLQQLGVTLSMTRTELSPAQIKQLLQNPPAG
VDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQK
NQTTTLAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNA
PTQFKGRLNELMSQIRMQNHFGAVKSEERYYVDADLLREIKQHLKQQQEGLSHLISIIKD
DLEDIKLIEHGLNENVHIRGGVFS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggctcccgcgggcggcacggcctcagctgccacccccgctgcc
cccgcgggtacctttggaggatttggaaccaccaccaccaccaccacagcaggttctgca
ttcagcttttctgctcccactaacacaggcacaagtggactctttggtgctacccagaac
aaaggttttggatttggtactggctttggcacaactgcaggaaccagtactggtttggga
accgggctaggatttggaacattcaatacccagcagcctcagaatactttagggggtctc
tttagtcagcccacccaagctcctgtccagtctaaccagctgattaatacagcaagtgct
ctttctgccccaacactactgggagatgagagagatgcaattttggcaaaatggaatcag
ctccaagccttctggggaacaggcaaaggatatttcaacaataatattccacctgtggac
ttcacccaggaaaatcccttctgtaggtttaaggcggtgggttatagctgcatgcccaac
aataaggatgaagatggcctggtggttttaattttcaataggaaggaaacagacatccga
agccaacaacaacaactaatagaatcagtccacaaaattttgggaggaaaccagaccctt
tctgtcaatgtagaaggtgttaaaacattgccagatgaccagacagaagttgtcatctat
gttgttgaacgttctccaaatggcacatcaaggcgagttacagctacagcactctatacc
cattttgaacaagcaaatataaaaacttcattgcagcaacttggagttaccctttctatg
actagaacagagctctcacctgcccagatcaagcagcttttacagaatcctcctgctggt
gttgatccaattatctgggaacaagccaaagtggataaccctgaccctgaaaagctaatt
cctgtgccaatggtgggtttcaaagaacttctccgaagactgaaggtccaagatcagatg
accaaacagcatcagaccagattagatattatatctgaagacatcagtgagttacaaaag
aatcagaccaccactctggctaaaatagcacaatacaagaggaaactcatggagctttcc
cacaggaccttgcaggtcctgattaagcaggaaattcagaggaagagtggctatgccatc
caggctgatgaagagcagctaagagtgcagcttgatacaatccagtgtgaattaaatgca
cctacacagtttaagggtcgcctgaatgagctgatgtcccagattagaatgcagaatcac
tttggagctgtgaaatctgaagaaagatactatgtggatgctgatcttctacgagaaatc
aagcagcatttgaaacaacaacaagaaggccttagccacctgatcagcatcataaaagat
gatctggaagatatcaaattaatagaacatggcttgaatgagaacgtccacattcgagga
ggtgtcttcagttga
DBGET
integrated database retrieval system
