Gracilinanus agilis (agile gracile opossum): 123252998
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Entry
123252998 CDS
T07702
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123252998 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123252998 (SMARCAD1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123252998 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
LA-virus_coat
Motif
Other DBs
NCBI-GeneID:
123252998
NCBI-ProteinID:
XP_044538190
LinkDB
All DBs
Position
6:22754159..22848557
Genome browser
AA seq
1056 aa
AA seq
DB search
MSHFNLDRFRFEKRNKIQEQPEPAPQPPPPPPTPPPPPPPQVELPSPVSTIIEDDDLERG
KGSRPGTPDSDITEKTEDSSVPETPEPERKSGVSYFRNQKGIQFIDLSSDSEDFASPNCS
NINREEKSEREPVIIVSEQSEDEQTEEYSNMTQRNDDISELEDLKDAKLQTLKELFPQGS
DSDLLKLIESTSTMDGAIAAALLMFGEGIPRKRKLDSSSSYTSEDEDDEDNQTVKRKRFN
PLEEPKDFEESEDKWDKQEAIVAKLQTEFPSLAKEELREVLKEHEWMYNEALESLRVFAD
DQQGKKSLPYTIMKHADFTTTNKVAMDVQYPSKSEVSNGKAVSRKSQNHLKNTTKTKLKQ
KCSVKAQNGFNKKGKKTFFTSKKEMPDSEFDSGSDVGSSLDEDYSSGEEVMEDGYKGKIL
HFLQGASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMCKTNGLSEDLIWHCKTLIQ
ERDVVIRLMNKCEDISNKLTKQVTKLTEGGGGWNIDQPSILNQSLSLKPYQKIGLNWLAL
LHKHGLNGILADEMGLGKTIQAISFLAYLYQEGNRGPHLIVVPASTLDNWIREVNLWCSN
LDVLFYYGSQEDRKQLRYDIHNKVVDFNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEG
HMLKNMGSVRYQHLMTINAKNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMF
SSKAKSAEEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDCVELCAMSEKQEQL
YFGLFNKMKKSINGMEKSSEMGNVMMQLRKMANHPLLHRQYYTAEKLKIMSQLMLKEPTH
CEANPDLIFEDMEVMTDFELHLLCKQYAHINDFMLDMDLILDSGKFKKLECILSELKEKG
DRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDQFNTDMDIFIFLLSTK
AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVHVIKLISQGTIEESMLKI
NQQKLKLEQDMTTTDEGDEGNVPADIATLLKTSLGL
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgagccacttcaacctggaccggttccgctttgagaagaggaataaaattcaggaacag
cccgagccagccccccagcctcctcctcctcctcctactcctccacctcctcctcctcct
caggttgagcttccttcacctgtttccactattattgaagatgatgatcttgaaagggga
aaaggtagcaggccaggaactccagattcagatataacagaaaaaacagaagattccagt
gtaccagaaactccagagcctgaaagaaagtcaggggtatcatatttcaggaatcaaaaa
ggaatacagtttattgatttgtcttcggacagtgaagattttgcctccccaaattgttct
aatataaatcgagaggaaaagtctgaaagagaacccgtgattatagtttctgagcaatct
gaagatgaacagactgaagaatattctaatatgacacaaaggaatgatgatatctcagaa
ttggaagaccttaaagatgcaaagcttcagactttgaaggaactatttccacaaggaagt
gacagtgatttacttaagttgattgaatcaacaagtacaatggatggggcaatagctgct
gcattgctgatgtttggtgaaggtatacctcggaaaagaaaattagattcatcttcctca
tacacctctgaagatgaggatgatgaggataatcaaaccgtaaaaaggaaacggttcaat
cctcttgaagagcccaaggattttgaagaatcagaagataaatgggacaagcaggaagca
attgtagcaaagctgcagaccgagtttcccagtttggctaaagaggaactaagagaagta
cttaaggaacatgaatggatgtataatgaagctttggaatctctaagagtatttgctgac
gatcaacaaggtaaaaaatctctgccgtataccatcatgaagcatgcagatttcacaact
acaaataaggttgcaatggacgtacagtatccttcaaaaagtgaagtttctaatggaaaa
gcagtctcaagaaagagtcagaatcaccttaaaaatactactaaaacaaagctgaaacaa
aaatgttctgttaaagcacagaatggttttaacaaaaaaggcaaaaaaacttttttcact
tctaaaaaggaaatgccagactctgagtttgattcaggctctgatgtcgggagctctttg
gatgaggactacagcagtggtgaagaggtgatggaggatggctacaaaggtaaaatactt
cacttcctgcaaggggcttcaattggtgagctcactttgattccccagtgttctcagaaa
aaggctcagaagataacagagctccggccctttaacagttgggaagctctgtttacaaaa
atgtgcaagacaaatggcttgtcagaagatttaatatggcactgtaaaacattaatccag
gaaagggatgtagttataagacttatgaacaaatgtgaagacatttcaaataaattaaca
aagcaggtcaccaagcttactgaaggtggaggtggatggaacatagatcaaccttcaatt
ctaaaccaaagtttgtctctcaagccatatcagaagattggtttaaattggctagcacta
ctacataaacatggattaaatggtattttggctgatgaaatgggtttagggaaaacaatt
caagccatttccttcctggcatatctctaccaagaaggtaatagaggtccgcatttaatt
gttgtgccagcttcaactttagacaattggataagagaagttaatttgtggtgctctaat
ctagatgtcctcttttattatggttctcaagaagatcgcaaacagcttagatatgatatt
cataataaagttgtagacttcaatgtgattgtgactacgtacaattgtgcaattagcagt
tccgatgaccgcagtctgtttcgacggctaaaacttaactatgcaatcttcgatgagggc
cacatgttgaagaatatgggatctgtacgctaccagcacctgatgaccattaacgcaaag
aatcgtctgctactgacaggcactcctgttcaaaataatctattggaactcatgtctctc
ttaaatttcgtcatgcctcatatgttcagtagcagcaccagtgagataagaagaatgttc
tcttccaaagcaaagtcagctgaagaacaaagtatatatgaaaaggagcgaatagcacat
gctaagcaaattataaagccatttattctgagaagagtaaaagaagaggtccttaagcag
ctacctcccaaaaaggattgtgtcgagctatgtgcaatgtcagaaaaacaagaacaactg
tactttggcctttttaataaaatgaagaaatccatcaatggcatggagaaaagctcagaa
atgggcaatgtgatgatgcagctaagaaaaatggctaatcaccctttattacatcgtcag
tactacacagctgaaaaactcaaaataatgtcacagcttatgctaaaggaacctacacat
tgtgaagctaatcctgacttgatttttgaagatatggaagttatgacagactttgaacta
catttactttgcaaacagtatgcacatatcaatgactttatgttagacatggatcttatt
ttggactctggaaaattcaagaaactagaatgcattttgtctgaattaaaagaaaagggt
gacagggttgtattatttagccagtttaccatgatgctggacatcttagaggttcttcta
aaacaccatcagcatagataccttagactggatggaaagactcagatttctgaaaggatt
cacctaattgaccagttcaatacagacatggatatctttatatttctgctttcaacaaaa
gctggtggacttgggataaatctgacttctgcaaatgttgtcatacttcacgatattgac
tgtaatccctacaatgacaagcaagctgaagatcgatgccacagagtaggtcagactaaa
gaagtgcacgtcataaagttaataagtcaagggacaatagaagaatctatgctcaaaatc
aaccaacagaaactgaaactagaacaagatatgaccacaacagatgaaggtgatgaagga
aatgtacctgcagatatagctacattactaaagacatcattaggtctctaa
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