KEGG   Gracilinanus agilis (agile gracile opossum): 123253069
Entry
123253069         CDS       T07702                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03420  Nucleotide excision repair
gas04115  p53 signaling pathway
gas04120  Ubiquitin mediated proteolysis
gas05161  Hepatitis B
gas05169  Epstein-Barr virus infection
gas05200  Pathways in cancer
gas05202  Transcriptional misregulation in cancer
gas05210  Colorectal cancer
gas05212  Pancreatic cancer
gas05213  Endometrial cancer
gas05214  Glioma
gas05216  Thyroid cancer
gas05217  Basal cell carcinoma
gas05218  Melanoma
gas05220  Chronic myeloid leukemia
gas05222  Small cell lung cancer
gas05223  Non-small cell lung cancer
gas05224  Breast cancer
gas05225  Hepatocellular carcinoma
gas05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123253069 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123253069 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    123253069 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123253069 (DDB2)
   05202 Transcriptional misregulation in cancer
    123253069 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    123253069 (DDB2)
   05212 Pancreatic cancer
    123253069 (DDB2)
   05225 Hepatocellular carcinoma
    123253069 (DDB2)
   05226 Gastric cancer
    123253069 (DDB2)
   05214 Glioma
    123253069 (DDB2)
   05216 Thyroid cancer
    123253069 (DDB2)
   05220 Chronic myeloid leukemia
    123253069 (DDB2)
   05217 Basal cell carcinoma
    123253069 (DDB2)
   05218 Melanoma
    123253069 (DDB2)
   05213 Endometrial cancer
    123253069 (DDB2)
   05224 Breast cancer
    123253069 (DDB2)
   05222 Small cell lung cancer
    123253069 (DDB2)
   05223 Non-small cell lung cancer
    123253069 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    123253069 (DDB2)
   05169 Epstein-Barr virus infection
    123253069 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gas04121]
    123253069 (DDB2)
   03400 DNA repair and recombination proteins [BR:gas03400]
    123253069 (DDB2)
Ubiquitin system [BR:gas04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123253069 (DDB2)
DNA repair and recombination proteins [BR:gas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123253069 (DDB2)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 EIF3I WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_Vps41 Beta-prop_ACSF4 Ge1_WD40
Other DBs
NCBI-GeneID: 123253069
NCBI-ProteinID: XP_044538286
LinkDB
Position
6:271942568..271956015
AA seq 480 aa
MAPKRSAGRGKRSFLPPEPPPAKRRCVWTPGRGCRLPARDSGQRDDASGWNQTGLTGQRE
YPHSIIWALCQRKLGRAPRASFQQCLQQTFLHSLDSYRLFRTASPFDRRTTCLEWHPAHP
STLAVGSKGGDIILWDYEVLNKTYFIKGIGAGGSITGMKFNPLNTNQLFISSVEGTTTLK
DFLGNTIRVFTRTNTWDNWYTSVDVSAKSRVVVTGDSVGNVILLNMDGKEVWNLRLHKKK
VTHVALNPHCDWLLATASVDQTVKIWDLRQVRGKSCFVHWMPHERAVNAAYFSPDGARLL
TTDQHSEIRVYSASHWTSPQLLIPHPHRHFQHLTPIKATWHPRYDLIVVGRYPDPNFAGF
TPHEPRTVDLFDGSSGKMVCQLHDPDCSGIISLNKFNPMGDTLASTMGYNILIWSPEEAV
RRKQEGLIKAMSEQGLGRDCLAHRCARRSRPGPTSSREQQKCLRLQGEARSKCKGKDPGP
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcccctaagcgatcggcgggccgcggcaagaggagcttcctgcctccggagccgccc
ccggccaagaggcggtgtgtgtggactcccggccgcggatgccggctgccagcccgggac
tcgggccaaagggatgatgcttcaggctggaatcagactgggttgactggtcagagggaa
taccctcatagcatcatctgggctctatgccaacgtaagctgggcagagctcctcgggca
tcgttccagcagtgtcttcagcagacctttttgcactctctggactcttaccgacttttc
cgaacagccagtccctttgaccggagaacgacgtgcctggagtggcatccagctcacccc
agcactctggccgtgggttccaagggtggagacatcatcctctgggactatgaagtgctg
aacaaaacctatttcattaaagggattggagcaggagggagcatcactgggatgaagttt
aaccctctcaataccaaccagctgttcatttcttcagtggaggggaccaccactctgaag
gactttctgggcaacacaattcgagttttcaccagaacaaacacttgggacaattggtac
accagtgtggatgtgtctgccaaaagccgcgtggtggtcacaggagacagtgtgggcaat
gtgattttgctgaacatggatggcaaagaggtctggaatcttagacttcacaaaaagaag
gtgacccatgtagctctgaatcctcactgtgactggttgctggccacagcctcagtggac
caaacggtgaaaatctgggacttgcgccaggtcagagggaaatcttgcttcgttcactgg
atgcctcatgagcgtgctgtcaatgcagcttatttcagtccagatggggccagactcttg
accacagaccagcacagcgagatccgggtatactcggcctcccattggacaagtccccag
cttctcattccccaccctcatcgccacttccagcacctcacacccatcaaggcaacatgg
catcctcgttatgacctcattgtggtggggcggtacccagaccccaattttgcaggtttc
actcctcatgagcctcggacggttgacttatttgacggcagctctgggaagatggtgtgt
cagcttcatgatccagattgctctggcatcatctcgctaaacaagtttaatcccatgggg
gacaccttggcctctacaatgggttacaacattcttatctggagcccagaggaggctgtg
agaaggaagcaggagggactgatcaaggccatgagtgaacaaggactagggagggattgt
ttagcccaccgatgcgcccgtcgaagcaggcctggcccaacctctagtagagagcagcag
aaatgtctgcgtctgcaaggggaagcaagaagcaaatgcaaagggaaggatccagggccc
tga

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