Gracilinanus agilis (agile gracile opossum): 123253142
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Entry
123253142 CDS
T07702
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03022
Basal transcription factors
gas03420
Nucleotide excision repair
gas05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123253142 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
123253142 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123253142 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123253142 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
gas03400
]
123253142 (GTF2H1)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123253142 (GTF2H1)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123253142 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
123253142
NCBI-ProteinID:
XP_044538374
LinkDB
All DBs
Position
6:complement(231662408..231699779)
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AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAIKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNTVDSPAASNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKMDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGVSPVPSTSNSSKSIKENS
NAAIIKRFNHHSAMVLAAGLRKQEAQHDHNENSTDGNSRDSDFFQPPVKRVKLQESIEYE
DLGKNNSIKTIALSLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIKQEMETYTPKLTQV
LSSGAASSTITALSPGGALMQGGPQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFPV
NTPFLEEKVVRMKNNLERFQATKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQS
RRLLKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatcagaagaagttttactgattgtaaagaaggtgcgtcaaaagaagcag
gatggagccctgtacctcatggcagaaaggatcgcttgggcacctgaaggcaaagacaga
tttacaatcagccatatgtatgcggacattaaatgccagaaaatcagtccagaaggaaaa
gctaaaatccagcttcagctggtgctacatgcaggagacacaaccaacttccatttttcc
aatgaaagcacagctataaaggagcgagatgctgtgaaagatcttcttcagcagttgcta
cccaaattcaagaggaaagccaataaagaactggaagagaaaaacagaatgctgcaagag
gaccctgtcttgtttcagctttataaagacctggtggtgagtcaggtgataagtgctgag
gaattctgggccaatcgtttaagcatgaatactgtggatagccctgcagcatccaatcac
aagcaagatgtgggcatttctgcagcatttctggctgatgtccgccctcagacagatggc
tgtaatggcctaaggtataatttaacctctgatatcattgagtccatatttaggacctac
ccagcagtaaaaatgaaatatgcagaaaatgttccacataacatgacagaaaaagagttc
tggacaagattttttcagtcccattattttcatagggatcgacttaacacagggtcaaaa
gatctctttgcagagtgtgccaaaatggatgaaaagggtttaaaaacaatggtatctcta
ggagtgaaaaacccactactagatttgacagcactggaggataaatcattagatgagggc
tatggagtttcccctgtgccatctacttccaactcttcgaaatccataaaggagaatagc
aatgccgcaatcatcaagagatttaaccatcatagtgccatggtcctggcagcaggtctc
aggaaacaagaagcacaacatgatcataatgagaacagcacagatgggaactctcgggat
tcagacttctttcagccaccagtcaaaagggtgaagttacaggaatccattgaatatgaa
gacttggggaaaaataatagcataaaaactattgcactaagcctaaagaagtcagatagg
tattatcatggtccaacaccaattcagtccctccaatatgcaacaagtcaggatattatc
aattcttttcagagtattaagcaagagatggaaacttacacacccaaactaactcaggtt
ctttcaagtggtgctgcaagtagtaccatcacggccctatcccctggaggagcacttatg
cagggaggaccacagcaagccataaaccagatggtgccaaatgacattcagtcagaactc
aaacacttgtatgtggctgtgggggagttgctgaggcatttctggtcctgttttccagtt
aacacaccattcctagaagaaaaggtagtaaggatgaagaataatttggaacgattccaa
gctactaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaatttg
gtaagtcacatagaagagatgttgcagacagcctacaataagctccacacatggcagtcc
aggcgcttgctgaagaagacgtga
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