Gracilinanus agilis (agile gracile opossum): 123253442
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Entry
123253442 CDS
T07702
Name
(RefSeq) collagen alpha-1(XX) chain-like
KO
K24357
collagen type XX alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123253442
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
OB_NTP_bind
HA2_C
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
NDNF
HA2_N
Motif
Other DBs
NCBI-GeneID:
123253442
NCBI-ProteinID:
XP_044538571
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Position
X:complement(142189..220588)
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AA seq
975 aa
AA seq
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MTAQVCICIWLVWASVLDLIHGQGPSPGTSRLRLTVLSEDRLQMKWKESEGNTNGYKVQV
KPMAGDSEQEVMLTTKTPKVTVVGLSPTKEYTLQIFALSGSRDTLLARRRFVIEDLKSIS
TGRNSRKPSGETLESIPSSVGNHEFEQVPELEFCLAVSASIFQGPQFYCDTSIPVDIVFL
VDGSWSIGRSNFRLIREFLANVISPFHIAQDKVQIGLSQYSGDPRTEWDLNSFSTKEEVL
EAIRNLRYKGGNTFTGLALTHVLEQNLKLEAGSRSEAVKVVVLLTDGKSQDDARLAAQVL
KDVGIDIFAIGVKNADESELTHLASLPLDVTVHNVLDFPLLGNLTSRLIRLLCWKIQERS
RSRDPGEGIHLSTHPSPTNLIVSEVTASGFRLAWTPPLEPARKYRIVYHPSRGGTPREVT
VEGATSSAQLLNLTSNTEYLVTVFPVYKDGVGEGLWDIVTTLPLSPPSSLTILSVAHNSI
HLTWKPTSKATQYLVHCTSASPREQEADEEEEDGREVRVRDPEVLLEGLASGTEYSIAVY
ALFGEEISESQSIRAKTLSLDLPKHLSFSEVSHSSVRVHWEASSRGVRMYRVSYVSLEGN
QAGEIDVSRNASSVNLAPLSSSTSYIVSVTSVYKEGDSSTLTGRVTTRKVPAPSHLKVTE
LPGDDVRLEWAAAAASGVVVYQIKWTPLGEGKAYEISVPGNLGTATLPGLGKHAEYEISI
LAYYRDGARSDTASLRYTPSLDKHCHLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEI
LSIAAMMQIQNVFVIPPNQKTQAMREHRKFAVEEGDHLTMLNVYEAFIKHSRNSQWCQEH
FLNYKGLMRAATVREQLKKLLVKFKIPKKSSEGDPDPVLKCIVSGFFANAAKFHSTGAYR
TIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTSRYYMRDVTAIESAWLLELAPHFYQQG
TPLSMKAKRAKVDDQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgacagcccaagtgtgcatctgcatctggttggtctgggcctcagtgttggacctcatc
catggacaaggacccagcccagggactagtcgactaagactgactgtgttgtctgaagac
cgactccagatgaagtggaaggaatcagaaggaaataccaatggctacaaagtccaagta
aagcccatggcaggagactcagagcaggaagtaatgctgactaccaagacacctaaagtc
acagtggttggactgagccccaccaaggaatacacactccaaatatttgcactcagtggt
tcccgtgacactctgctggccaggcggagatttgtgattgaggatttgaagagcatctcc
acaggcagaaatagccggaagccatcaggggaaactttggagtccattccttcttcagtg
ggaaatcatgaatttgagcaggttcctgagcttgaattctgcttagctgtctctgcctcc
atcttccaaggtccccagttctattgtgacacctccattcctgtggacatagtattcctg
gtggatggatcctggagtattggccgaagtaacttcaggctcatcagagaattcctagct
aatgtcatctctccttttcacattgcccaggataaagtccaaattggtttgtcccaatat
agtggagaccctcggactgaatgggacctgaattcattcagcaccaaagaagaagttcta
gaggctattcgaaatctccgttataagggtggtaacaccttcaccggtcttgcactgact
catgtactggagcagaatctgaagcttgaagctgggtctcgttctgaggcagttaaagta
gtcgttcttctgactgacggcaagtcccaggatgatgccagacttgctgctcaagttctg
aaagatgtgggcatagacatctttgccattggagtgaagaatgccgatgagtctgagctg
acacacctggcatcccttcccctggatgtcacagttcacaatgttctggatttccctctc
cttggcaacctgacaagcaggctcatcaggctcctctgttggaagatccaagagagaagt
cgaagcagagacccaggtgaagggatacatttatcgacccatccaagccccacgaacttg
attgtatcagaagtgacagcctcaggattccgtctggcctggacccctcctctggagcct
gccagaaagtacaggatcgtataccatccctccagaggtggcacacccagggaggtcaca
gtggaaggggctacttcatctgcccagctgctgaatttgacctccaacacagagtacttg
gtcacagtgtttcctgtctataaggatggtgttggagaggggctctgggacatagtgact
acattaccactgtctcctccaagctcattgaccattttaagcgtggcccacaatagtatc
catttgacctggaagcccacaagtaaagctacccagtacctcgttcactgcacttcagct
tcccctagagagcaggaggcagatgaggaagaggaagatgggagagaggttcgagtgagg
gaccctgaggttctgctggaaggtttggcttctggtacagaatatagcattgctgtatat
gccctctttggggaggaaatcagtgagtcccagagcatccgagccaagaccttgtctttg
gatctccccaaacacctgagcttctctgaggtcagccacagctctgttcgagttcactgg
gaggcatcatcgaggggagttcgcatgtaccgtgtgtcctatgtctcactggaagggaac
caagctggggagatagatgtctccaggaatgcctcctctgtcaacctggccccactgtcc
tcctccacctcatatattgtcagtgtcacatcagtctacaaagagggggattcttccaca
ctcactggacgagtgaccacacgaaaagtcccagccccaagccacttgaaagtaactgaa
ttgccaggggatgatgtcagactggagtgggctgccgctgcagcctctggtgtggtggtc
tatcagatcaaatggacacctttgggtgaaggaaaggcttatgagatttctgtcccaggg
aacctaggcactgctactttgcctggtctagggaagcatgcagaatatgagatctccatc
ttagcctattacagagatggggcccgtagtgacacagcatccctccgatatactccgagt
ctggataaacattgtcacctaactgaacctcttggcatgagaatagcagagtttcctttg
aatcccatgtttgcaaagatgttgctagagtcaggaaattttggatgttctcaggagatt
ttgagcattgcagccatgatgcagattcagaatgtttttgtaattccaccaaatcagaaa
actcaggctatgagggaacaccgaaaatttgctgtggaggagggtgaccatctcactatg
cttaatgtgtatgaagcttttatcaaacacagtaggaattcacagtggtgtcaagagcat
ttccttaactataaggggcttatgagggctgcaactgtaagggagcaattgaaaaagctg
ctcgtcaagtttaaaataccgaagaaatctagtgaaggtgacccagatcctgttctaaag
tgtattgtttctggattctttgctaatgctgctaagtttcattccactggagcgtatagg
actatccgtgatgatcatgaattacacatacatcccacatcagtactctacgcagaaaaa
ccacctcgatgggttgtctacaatgaggtcatacagacttcaagatactacatgagggat
gtgactgctattgaatctgcttggctgttggagttggcaccacatttctatcagcaggga
acgcctctttcaatgaaagccaaaagggccaaggttgatgaccagtga
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