Gracilinanus agilis (agile gracile opossum): 123253489
Help
Entry
123253489 CDS
T07702
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123253489
09123 Folding, sorting and degradation
03018 RNA degradation
123253489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123253489
03041 Spliceosome [BR:
gas03041
]
123253489
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123253489
mRNA cycle factors
Stress granule specific factors
123253489
Spliceosome [BR:
gas03041
]
Complex C
Other components
Complex C specific factors
123253489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
YflT
POP1_C
TAFII55_N
Motif
Other DBs
NCBI-GeneID:
123253489
NCBI-ProteinID:
XP_044538609
LinkDB
All DBs
Position
X:11606257..11608149
Genome browser
AA seq
622 aa
AA seq
DB search
MASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVL
ETMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSVFGNILSCK
VISDENGSKGYGFVHFENQQSADKAIEKMNGVRLNNLKVFVGRFKSRKERELELGARARE
FTNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDDSGKSKGFGFVSYEKHEDAQRAVD
EMNGKELNGKRIYVGRAQKKGERQTELKRHFEQVKQDRSSRYQGVNLYVKNLDDSIDDDR
LRKVFSPFGTITSAKVMMEGGHSRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALAQ
RKRDRQAHLTNQYMQRMANFQAMSNPVFNPYQPPPTSRYFMTTLPPPQTRPAYYPFGQLT
QFRPTPHWGVPGGRFHPFQTIPGVMRPRAPTSPFNPVTSPSVPVSAIMNTQHMVNPPSQM
MGQPTPPFMPTVRSVQQYKYAAGVRNPKHLNMPLPVTTPQPSGLFEYPEPLTASMLAATP
PHEQKQILGERLFPLIQVLNPALAGKITGMLLEIDNSELLHMLESPESLQAKVDEAVAVL
EAHQAKEAAEKKGDILPKMPPD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctgtatgtaggtgatctacaccatgatgtgacagaggcaatgttgtatgaa
aaattcagcccggctgggcctattttgtccattcgcgtgtgtagggatatgctcacccgc
cgttccctcggctacgcctacgttaacttccagcagttggcagatgctgagcgagtgttg
gagaccatgaacctggatgtgatcaagggcaagccggttcgcattatgtggtcccagcgt
gacccctccctgcgcaagagtggcgtgggcaacattttcattaaaaacctagagaagtcc
attgacaacaaagccctgtataaaactttctctgtctttggaaatatcctgtcctgcaag
gtgatcagtgatgagaatggttccaagggctatggctttgttcactttgaaaaccagcag
tctgctgacaaagcgattgagaaaatgaatggggtacgtctgaataatctcaaagtgttt
gtcggacgctttaaatcccgcaaagagagagaacttgaacttggagctagagctagagaa
ttcactaatgtttacatcaagaattttggagaagatatggacaatgatagacttactgaa
gtctttggtaaatttggacatgctttgagtgtaaaggtgatgactgatgacagtgggaag
tccaaaggttttggatttgtgagttatgaaaaacacgaagatgctcagagagctgtagat
gaaatgaatggcaaggagctcaatggaaagcgcatttatgttggccgagctcagaaaaag
ggagaaaggcagaccgaactcaaacgtcactttgaacaggtgaaacaagacagaagcagc
agataccaaggtgttaacctttatgtgaaaaatcttgatgatagtattgatgacgaccgc
ctacgaaaggtgttttctccatttgggacaatcacaagtgcaaaggttatgatggaaggg
ggtcacagcagaggctttggatttgtctgtttctctgcacctgaggaagctgccaaagca
gtttctgaaatgaatggcaaattggtagctaccaaacctctctatgtagctttagcccag
cgcaaacgagaccgccaggctcacctgacaaaccagtacatgcagagaatggctaatttc
caagccatgtctaatccagtgttcaacccctatcaaccgccacctacttccaggtacttc
atgacaactcttccaccgcctcagactcgccctgcttattatccttttgggcaacttact
caattcagaccaactcctcactggggtgttcccgggggaagatttcatccattccagacc
atccctggcgtaatgcgtccaagggcacctacatccccatttaatcctgtgacgtctcca
tctgtacccgtttcagcaattatgaatactcagcatatggttaatccaccaagtcagatg
atggggcagccaactccaccattcatgcctactgtgcgctcagtccagcaatataaatat
gctgctggagtccgcaatccaaaacacctcaacatgccactaccagtcactactcctcag
ccttctggcctttttgaatacccggagcctctaaccgcctccatgttagctgccactcct
cctcatgagcaaaagcagattttaggagaacggctgttcccactcattcaagtcctaaat
cctgctctggcgggcaagatcactggcatgctgctagagatcgacaactcagagcttcta
catatgcttgagtctcccgagtctctccaggctaaagttgatgaagccgtggctgtcctg
gaagctcaccaagctaaagaagctgctgagaagaaaggtgacattctccctaagatgcca
ccagattaa
DBGET
integrated database retrieval system
