Gracilinanus agilis (agile gracile opossum): 123253664
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Entry
123253664 CDS
T07702
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123253664
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gas01009
]
123253664
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123253664
Protein phosphatases and associated proteins [BR:
gas01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123253664
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Protocadherins
123253664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
FctA
Cadherin_4
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
123253664
NCBI-ProteinID:
XP_044538757
LinkDB
All DBs
Position
X:complement(45658118..46200443)
Genome browser
AA seq
1425 aa
AA seq
DB search
MSYLLKALRFDSLEFHSKSLAYLRNVFRQLYSNIRRRHRSHPNVSAVLGNAKLDLDVFFF
SAVCNFSSGGVSPLLDCFSAIRVTISAFIQVIQPQVIFQYFRRTVRSIAEMGFYSGFCIL
TFLMTFILESGAQEKNYTVREELPENVLIGDLVKDLNLTFSPDKKLTTPLQFKLVYKSGD
LPIVKIEETTGEIYTTGVRIDREELCTGIYIETHCFYEVEVAVLPDEIFKLVKIRFIIED
VNDNAPLFPATVINISIPENTAINSRYPIPSAIDPDIGINGIQQYELIKSLVPGFNVGPN
TTKYLEGLDIFGLDVIETPEGEKWPQLIVQKMLDREERDTYVMKLKVEDGGSPPRSSTAI
LQVSVIDMNDNRPIFKETEIEVTIPENAPVGSSVYQLHATDADVGANARIQYFFSNLMSN
VARKLFSLNNTTGLITIKEPLDREQAPLHKLMIVATDGGPMPARAMVIVNVTDVNDNLPL
IDVRYIIDTTNGTVVLSENAALNTKIALVTLIDKDADRNGRVTCFTTNDVPFRLRPVFDN
QFLMETSSFLDYETSKEYEIKLLASDAGKPPLNYSTSVVIKIKDENDNAPIFTQPTFGVS
VPENNAPGAQLTKISATDRDSGKNGEITYLIASEGPSPFSLDNRTGILTAVEQLDRETKD
KYTFTVTARDNGEPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENLPKHGTVGLITI
TDPDAGDNGVITLTILNNNGSFIIDAVNGVIRPNISFDREKQESYTFVVVATDGGRVPRS
SSAKVTINVVDINDNKPVFILPPSNYTFEFIPLATEIGTLLYVVMAIDEDTGMNAEIRYQ
IEDGNKKKLFEMEGSSGNITLKSKFVPADTGLHKLLIKARDLGQPDSMNSKILVNLFVND
SLHNSSFVDELLRRALGKSRNREVEKTDVVNTINSDYIKYIIAIISGSMTAVLTIVIAAI
LRCRHFPGFKGRKQNSEWVTPNPANSETITLTTTDIGGANSVIVNLVSLAEPRTDDAENE
EEVTTSIDVAVDIEEATMERYNWGTNSSTFKPDGPDLAQHYKATSPQPTFHIEPETPVHS
KHHVIQELPLDNTFVMGCDSLSKCSSSSSDPYSISDCSCQGTIKTTATIHPRQAANELGM
TDIPLNDPNVIAIRTYPLHLMPAARPRTPLREPAVQETVVDIWGPPERKPEPKKPGKAQR
RVTFHLPESSQESSSDNGPIDVEAGAVGGARPFGYGRREYYDHATHSNRTEGDGNSDPET
ACINGLRKAAEVTVQPTLEEASDNCTQECFILGHSDSCWMPAALPQYQQPRSPEPPAVIR
HSPPASHLITTTVLCHNPPQPQAAAICPSPPQAQRLELGHGARPEERGATGGLFAQDDSL
QGRRSGPRGLFCTAEHDNSIKVIPMMTFPPGRARREFPKVEENPM
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgagttatctacttaaagcgttaagatttgattccttagaattccactctaaatccctg
gcctacctcaggaatgtctttcgacaactgtacagtaacatacgacgaagacatcgcagc
catcccaacgtcagcgctgtacttgggaatgctaaactcgaccttgatgtctttttcttc
tcggcagtttgcaatttcagctctggaggtgtttcccccctcttagattgcttttctgca
attagggtgactataagtgccttcattcaagtgatccagccacaagttatttttcagtat
tttcggaggaccgtaagatccattgccgagatgggtttttattctggattttgcattttg
accttcctgatgacattcatattagagtctggtgcacaggaaaagaattataccgtacga
gaagaactacctgaaaatgtcctgataggtgatttagtcaaagatctaaatctgactttt
tcaccagacaaaaagctaaccaccccactacagtttaagttagtatataagagtggcgat
ttgccaatagtaaaaatagaggaaacgaccggtgagatttatactaccggtgtacgcata
gatcgggaagagttatgcactggcatttatattgagacccactgtttttacgaagtggag
gtagctgttttgcccgatgaaatctttaaattagtcaagatacgttttataattgaagat
gtcaatgataatgcaccactttttcctgcaactgtcatcaatatttctattcctgagaac
accgctatcaattcacgctatccgataccttcagctattgatcctgatattggaatcaat
ggaattcaacaatacgaactaattaagagcttggttcctggcttcaacgtgggccccaac
accacgaaatacttagagggtctagatatatttgggctcgatgtcatcgaaacacctgag
ggagaaaaatggccccaattaatagtccaaaagatgctagatcgagaagaaagagataca
tatgtgatgaaactaaaagtcgaagatggcggctcacctccaaggtccagtacagccatt
cttcaagtatctgtgattgacatgaatgacaaccgtccaatctttaaggagacagaaatt
gaagtcactatacctgaaaatgcccctgttggctcttcggtatatcaactacatgccaca
gatgccgacgtgggtgcaaatgcacggattcaatacttctttagcaatcttatgagcaat
gttgctcggaaactttttagcctcaataatactacaggacttattactatcaaggagccc
ctggatagggagcaagcacctctacacaagttaatgattgtagccactgatggcgggcca
atgccagctagggccatggtgatagtaaatgtcacagatgtaaacgacaacctcccgcta
attgacgtcagatatattatcgataccaccaatgggacggtggttttgtcagaaaatgct
gcactcaataccaaaattgccctcgttacactgatagataaagatgctgaccgtaatgga
agagtgacatgtttcacaacaaatgatgtccctttcagattaaggccagtttttgacaat
caattcctgatggagacttcctctttcctagactatgagacttcaaaagaatatgagata
aaattgttggcttctgatgctggcaaacctcctttgaattatagtacttcagtcgtgatc
aaaatcaaagatgaaaatgataatgcacctattttcacccagccaacctttggggtttct
gtcccagagaacaatgctcctggtgctcagctgacaaaaattagtgcaacagatagagac
agtgggaagaatggagaaatcacttacctgatagctagtgagggcccctcccctttcagc
ctggataatcgtacaggcattctgacagcagtggaacaacttgatagagaaacaaaagac
aaatacaccttcacagtcactgcaagggacaatggggagcctcacttgcagagcaatgct
acagtgactgtgacagttcttgatcagaatgacaacagccccactttcacccatagcgag
tacaacttctacgtcccagaaaacctgcccaagcatggcacagtgggactcatcactata
accgatcctgacgctggagataatggagtcatcactctcaccattctaaataacaatggt
agttttatcattgatgcagtaaatggagtcatccgacccaatatctcttttgacagagag
aaacaagagtcttatactttcgtagtcgtagccacagatggcggtagagtgccacgctct
tcatctgccaaggtgaccataaatgtggttgacattaatgacaacaaaccagttttcatt
cttcctccttcaaactacactttcgagtttattccactagctactgaaattggcacactt
ctgtatgtagtgatggctatcgatgaggacaccggcatgaatgccgaaattcgttaccaa
attgaagatggaaacaagaagaaattatttgaaatggaaggatcatcagggaacataacc
ctgaaatcaaaattcgttcctgcagacacaggtctacacaagctgttgatcaaagctagg
gacttaggacaacctgactcaatgaatagcaagatacttgtaaatctattcgtaaatgac
tctcttcacaattcttctttcgttgacgaactacttcgccgagctctgggaaaatcaaga
aaccgggaggtagagaagactgatgtcgtgaacaccataaacagtgactatatcaagtac
atcattgccatcatttctggttcaatgactgctgtcttgaccattgttatcgctgctatt
ttacgttgccgccattttccaggcttcaaagggagaaagcagaattcagaatgggttact
ccaaatccagctaacagtgagacaataacactgaccaccactgatattggtggcgctaac
agcgtcatcgttaacctcgtctcccttgccgaacctaggactgatgatgccgagaatgag
gaggaggtcactacctccatagatgttgctgtggacattgaagaagcaaccatggagagg
tacaattggggtaccaattcttctacttttaagcctgatggtcctgatttggcccaacac
tacaaggctacatctcctcagccaaccttccacattgagcctgagacccctgtgcattca
aagcaccatgtgatccaggagctgcctctggacaatactttcgtgatgggctgtgactct
ctttccaaatgttcctccagcagctcagatccatacagcatttctgactgtagctgccag
ggaaccatcaagactactgccaccattcatccccgacaggctgccaatgagcttgggatg
actgatattccactgaatgatccaaatgtgatcgctattcggacttaccctctgcattta
atgccagctgcgagaccacgcaccccactgcgagaacccgctgtccaggagacagtggtg
gacatctggggtcctcctgagaggaaaccagagccgaaaaagccaggaaaggctcaacgc
cgtgtgactttccacctccccgaaagctctcaggagagcagcagtgacaatggacctatt
gatgtggaagcaggtgccgttggtggtgctaggccatttggctatggacggagagaatac
tatgaccatgctacccacagcaaccgcactgaaggagatggcaactctgacccggaaact
gcttgcattaatggactcaggaaagctgccgaagtaaccgtgcagcccaccctcgaagaa
gcctctgacaactgcacccaagaatgctttattcttggccattctgactcctgctggatg
cctgctgcgctgccccagtatcagcagccgcggtctccggagcctcctgccgtgattcgc
cacagccctccggcttcacatctgatcacaaccacagtgttatgtcataatcctccccag
ccccaggctgctgccatttgccccagtcctcctcaggcacagaggctagaattggggcat
ggtgcaaggcctgaagaaaggggcgctacagggggactctttgcacaggatgactctctt
cagggccggagaagcggtcccagaggcctgttttgcacagctgagcacgataactcaatc
aaagtaattcctatgatgaccttccctcctggccgggctcgacgggagtttcctaaagtt
gaagagaatcccatgtaa
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