Gracilinanus agilis (agile gracile opossum): 123254409
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Entry
123254409 CDS
T07702
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04340
Hedgehog signaling pathway
gas05200
Pathways in cancer
gas05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
123254409 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123254409 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
123254409 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
123254409
NCBI-ProteinID:
XP_044539373
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MAPGELLTSGPAAPSQGRAPLWLRAHVGSLLFGLGCAIQRHCGKVLFVGLLAFGALALGL
RGAAVETDLERLWVEVGSRVSQELRYTKEKLGEEAVYTSQTLIQTARHASENILTPEALG
LHLQATLAASKVQVSLYGKSWDLNKICYKAGVPVIENGMIERMIEKLFPCVILTPLDCFW
EGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDKAQVGQAYVGRPCL
HPDDPHCPASAPNHHSRQVPDIARELSGGCHGFSRKFMHWQEELLLGSPVRSPQGRLLSA
EALQSTFLLMSPRQLYDHYRGDYETHDISWSEAQAGAVLQAWQRRFVELAQQSVPQNASQ
QIHAFSATTLDDLLRSFSDISAVRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLV
ALSVASGLGLCSLLGMTFNAATTQVLPFLALGIGVDDMFLLAHAFTEAPSGTPLQERTGE
CLQRMGTSVVLTSVNNLVAFFMAALVPIPALRAFSLQAAVVVSCNFTAVLLIFPAILSLD
LHRRHRQRLDVLCCFSSPCSSRVIQIQPQELGEGQMARGGAHLTTTVQAFARCDTAGQHV
VTILPPTTHLGPLPAEPLGSQLFGPMGSTRDLLGQVAGPGRGQACRPLPCARWNLSRFAR
CQYAPLLLQPRAKGLVLVLFGALLGLSLYGATWVQDGLTLTDVVPRGTKEYDFLAAQIKY
FSLYEVALVTQGGFDYARSQRALLDLHSRFSALKSVLAPQPPRSWLHRYSAWLQGIQAAF
DQDWADGRITRHSCRNGSEDGALAYRLLIQTGDAKEPLDYSQLDKRKLVDADGLVLPELF
YVGLTVWVSRDPLGLAASQANFYPPPPEWLHDKYDSAGESLHIPPAQPLEFAQFPFLLSG
LRQTADFVEAIEGARAACAEAGRAGIRAYPSGSPFLFWEQYLGLRRCFLLAVCVLLACTF
VVCALLLLSPWTAGLI
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggccccgggggagctactgacctccggccccgcggccccctcgcagggccgggccccc
ctctggctgcgtgcccacgtgggcagcctgctcttcggcctgggctgcgcgatccagcgg
cactgtggcaaggtgctcttcgtggggctgctggccttcggagcccttgcacttggtctg
cgtggagctgccgtggagacggacctggagcgcctctgggtggaagtgggcagcagggtg
agccaggagctgcgctacacaaaggagaaacttggggaagaggccgtgtacacatcccag
accctaatccagactgcccgccatgccagcgaaaacatcctcacccctgaggctctgggt
ctccaccttcaggccaccctggcagcaagcaaagtacaagtgtcactctatggaaagtcc
tgggatttgaacaaaatctgctacaaggcaggggtccctgtcattgagaatgggatgatt
gagaggatgattgagaaactgtttccctgtgtgatcctcaccccgctggactgcttttgg
gagggagccaagctgcaggggggctctgcatacctaccgggccggcctgatattcagtgg
accaacctggacccagagcagctcctggaagaactaggcccctttgcctccctcgagggc
ttccgggagctgctggacaaagcccaggtgggccaggcctacgtcggacggccctgcctg
caccctgacgaccctcactgcccagccagtgcccccaatcaccacagcagacaggtcccg
gacattgctcgagagctgagcggcggctgccatggcttctcacgcaagtttatgcactgg
caggaggagctgctgctgggcagcccggtgaggagccctcagggccggctgctcagtgct
gaagccctgcagagcaccttcctgctcatgagtccccggcagctgtatgaccactaccga
ggagactacgagacccacgacatcagctggagcgaggcccaggccggtgctgtgctccag
gcctggcagaggcgctttgtggagctggcccagcagtcggtgccccagaatgcctctcag
cagatccacgccttctctgccaccaccctggatgacctcctgcgctccttctccgacatc
agtgcggtccgtgtggccgggggctacctcctcatgctggcctacgcctgtgtgaccatg
ctgcgctgggactgctccaagtcgcagggtgctgtgggcctggccggagtcctgctagtg
gccctctctgtggcctctggcctcggcctctgctccctgttggggatgaccttcaatgct
gctacgactcaggtgctcccgttcctggccctgggcatcggcgtggatgacatgtttctg
ctggcccatgccttcaccgaggccccgtctggcacccccctgcaggagcggacgggcgag
tgcctgcagcgcatgggcaccagcgtggtgctcacctccgtcaacaacctggtggccttc
ttcatggctgcgctggtccccatccctgccctgcgggccttctccctgcaggccgccgtg
gtggtcagctgtaacttcacggccgtgctgctcatctttccggccatcctcagcttggat
ctgcaccggcgccatcggcagcggctggacgtcctctgctgcttctccagcccctgctca
tcccgcgtgattcagatccagccccaggagctgggggagggccagatggcccgaggaggg
gctcacctcaccacgacggtgcaggccttcgcccgctgcgacactgcaggccagcatgtg
gtcaccatcctgccccccaccacgcacctgggcccgctgcccgccgagcccctgggctcc
cagctctttggccccatgggctccacgagagacttgctgggccaggtggcggggccaggc
cggggccaggcgtgccggccgctcccttgtgcccgctggaacctgtctcggtttgcccgc
tgccagtacgccccgctgctgctccagccacgagccaagggcctggttctggtgctcttc
ggggccctgctgggcctgagcctgtacggagccacgtgggtccaggacgggctgaccctg
acggacgtggtgccccgcggcaccaaggagtacgacttcctggccgcccagatcaagtac
ttctccctgtacgaggtggcgctcgtgacccagggcggcttcgactacgcccgctcccag
cgggccctgctggacctccacagccgcttcagcgccctcaagtccgtgctggcgccgcag
cctccgcggagctggctgcatcgctacagcgcctggctccaggggatccaggccgccttt
gaccaagactgggccgacggccgcatcacacgccactcgtgccgcaatggctccgaggac
ggggccctggcctacaggctgctcatccagacaggagacgccaaggagcccctggactac
agccagctggacaagcggaagctcgtggatgcggatggcctcgtcctcccggagctcttc
tacgttgggctgaccgtgtgggtgagcagagaccccctgggcctggccgcctcccaggcc
aacttctacccacctccccccgagtggctccacgacaagtacgacagcgcgggcgagagc
ttgcacatccccccggcccagcccctggagttcgcccagttccccttcctgctgagcgga
ctccgacagaccgcagacttcgtggaggccatcgagggggcccgggccgcctgtgccgag
gcgggccgagccgggatacgggcctaccccagcggctcccccttcctcttctgggaacag
tacctgggcctccggcgctgcttcctgctggccgtgtgcgtgctgctggcctgtaccttt
gtggtctgtgccttgctcctgctcagcccctggacagctggcctcatc
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