Gracilinanus agilis (agile gracile opossum): 123256526
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Entry
123256526 CDS
T07702
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas03015
mRNA surveillance pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123256526
09122 Translation
03013 Nucleocytoplasmic transport
123256526
03015 mRNA surveillance pathway
123256526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123256526
03041 Spliceosome [BR:
gas03041
]
123256526
03009 Ribosome biogenesis [BR:
gas03009
]
123256526
03012 Translation factors [BR:
gas03012
]
123256526
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123256526
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123256526
mRNA cycle factors
Stress granule specific factors
123256526
Spliceosome [BR:
gas03041
]
Complex C
Other components
EJC/TREX
123256526
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
90S particles
Helicases
123256526
Translation factors [BR:
gas03012
]
Eukaryotic type
Initiation factors
eIF-4
123256526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
CobA_CobO_BtuR
AAA_30
Motif
Other DBs
NCBI-GeneID:
123256526
NCBI-ProteinID:
XP_044541059
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MATSGSAGKRLLKEEDMTKVEFETSAEVDVVPTFDSVGLREDLLRGIYAYGFEKPSAIQQ
RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILVPTRELAVQIQKGL
LALGDYMNVQCHACIGGTNVGEDIRKLDGGQHVITGTPGRVFDMIRRRSLTTRAIKMLVL
DEADKMLDKGFKEQIYDVYRYLPPSTQVVLSSATLPHEILEMTNKFMTDPIRILVRRDEL
TLEGIKQFFVAVEREEWKFDTVCDLYDSLTITQAVIFCNTKRKVDWLTEKMREANFTVSS
IHGDMPSRERECITKEFRSGANRVLISTDVWARGLDIPQVSLIINYDLPNNRELYIHRIG
RSGRYGRKGVAINFVKSEDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcaggttctgcagggaagaggctgctgaaagaggaagacatgaccaaagtg
gaattcgaaaccagtgcagaagtggacgtggtacccacttttgactcagtgggtttgaga
gaggacctgctacgaggcatctatgcctatggttttgagaaaccatccgcaatccagcag
cgtgccatcaaacaaatcattaaaggaagagacgtcatcgcccagtctcagtcaggtacg
ggcaaaacggcaacatttagcatttcagtcctccagtgtttggatattcaggtcagagaa
actcaggctttgatcttagtcccgacccgggaattagctgtacaaattcaaaagggtctt
cttgctctgggtgactacatgaacgtccagtgtcacgcctgcatcggggggacaaatgta
ggcgaagatatcaggaagctggacggggggcaacacgtcatcactggcactccgggtcgc
gtatttgacatgatccggcgcagaagtttaacaactcgtgctatcaagatgttggttttg
gatgaagctgacaagatgcttgataaaggattcaaggaacagatttatgatgtgtacaga
tacctgcctccttctactcaagtggttctgagcagcgccacgttgcctcacgagatcttg
gaaatgaccaataaattcatgactgacccgattcgcatcctggtaagacgtgacgagttg
actctcgagggaatcaaacagtttttcgtggcggtggaaagagaagagtggaaatttgac
accgtgtgtgacctttatgattctttgaccatcactcaagcagtcatcttttgtaatacc
aagaggaaggtagactggctgactgagaaaatgagagaagccaacttcaccgtttcctca
attcacggagacatgccctcaagagaaagggagtgcatcaccaaagagtttagatccggt
gcaaatagagttctcatttccacagatgtctgggctagaggattagacattcctcaagtc
tctctcatcattaactatgacttgcccaataacagagaattatacatccacaggatcggg
agatcaggtcgatatggccgaaagggcgtcgcaattaattttgtcaagagtgaggatatt
cgtatcctcagagatattgaacagtactactcaactcaaattgatgaaatgcccatgaat
gttgctgatctcatctga
DBGET
integrated database retrieval system
