Gasterosteus aculeatus (three-spined stickleback): 120807636
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Entry
120807636 CDS
T07457
Symbol
ddx51
Name
(RefSeq) ATP-dependent RNA helicase DDX51 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120807636 (ddx51)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120807636 (ddx51)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Pre-60S particles
Helicases
120807636 (ddx51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
CMS1
Motif
Other DBs
NCBI-GeneID:
120807636
NCBI-ProteinID:
XP_040015808
UniProt:
G3PF36
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All DBs
Position
18:complement(13346255..13351841)
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AA seq
674 aa
AA seq
DB search
MSLFVVNRYLGEEENESVPKESRAQALLAKLQQKAKEKQRQSQTEERKRPLKERTEEQEV
KKKRKADKNSAQEPERRKKRKSEDLPLFNAVSDHEPVEEAKKNEACANKKQKKKKKEKSS
SPVKGSPDTPATGRDEQEVGEEEEAQAGNVTLKETTEKTPAPTGFTVLGGFKNKPVQKVH
RVLPQWLAQPDVIHRDIRSNLVPIADVPRLSPLLVRKLQINGIHQLFPVQAEVIPAILES
AQQGLLIGRGGYKPRDICVSAPTGSGKTLAFVIPVIQVLTERVVCEVRALAVLPTKELAQ
QVWKVFKSYSEGTSLKVVMLAGLKSFAAEESSLSELRGGMRRSLADVVVATPGRLVDHIN
KNSGLSLEHLRFLIIDEADRMIDSMHQSWLSQVVKAVYRSGGGADPMCIFRRSEPAHVTA
ASLSPPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSIHSHSGSGTPQASTQTQGGFD
FPQGLTEYYVPCTLSKKPLLILHFILRMKHSPVLCFTNSKETAHRLHLLVQFYGGIRVAE
FSSRLSPTERKKTLKEFEQGKIQLLISTDAAARGIDINGVKCVVNYDAPQYIRTYIHRIG
RTARAGKPGLAFTFLLGVQEKNFLQMVKEAGTPGIQKQIVKPENLKGMEAQFQLTLQELA
NAIKVPADNHSLNV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttgttgtaaacagatatcttggagaggaggaaaatgagagtgtcccgaag
gagtctcgcgctcaggcgttactggctaaactgcagcagaaggccaaagagaagcagaga
cagagtcagacagaggaaaggaaacgcccgctgaaagaacggacggaagaacaagaagtg
aaaaagaaaaggaaagctgacaagaacagcgctcaagagcctgaacgtcgcaaaaagagg
aaatcagaagatctgcctctattcaatgccgtctctgatcatgagcctgtggaagaggca
aagaagaacgaggcgtgtgcaaacaagaaacagaagaagaagaaaaaggagaagtcatcc
agtccagttaaaggttctcccgacactccggcgaccgggagagacgagcaagaggtggga
gaagaagaggaggcacaggcgggaaacgtgacactaaaagaaaccacggagaaaactcct
gctccaactgggttcacggttctgggtggattcaaaaacaaaccggtccaaaaggtgcac
agagtcctgcctcagtggctcgctcagccggacgtgattcacagagacatcagaagcaac
ctggtccccatcgccgacgtcccgcgactctcccctctgctcgtgagaaaactgcaaatt
aatggaatccatcaactctttccagtgcaagcagaggtaatcccggccatcttggagagc
gcacagcaggggcttctgattggacgaggcggctacaagcccagagatatttgtgtgtcg
gcgccgacgggaagtggcaagactctcgcgtttgtcatacctgtcatacaggtgctgacg
gagcgggtggtgtgtgaagtccgggcgttggccgtgctgccgaccaaagagctcgcccag
caggtgtggaaggtgttcaagtcgtacagcgagggaacctctctgaaggtggtgatgctg
gcgggtctgaagtcctttgctgccgaggagtcttcgctctccgaactcagagggggaatg
agacgcagtttagccgacgtcgtcgttgccacaccgggtcgactcgtcgaccacatcaac
aagaactcgggcctgagcctggagcaccttcggtttctcattattgacgaggctgacagg
atgattgacagcatgcaccagtcttggctcagccaggtggtgaaggcggtgtaccgatca
ggaggcggcgcagaccccatgtgcatcttcaggcggagtgagccggcacacgtcacggca
gccagtctgtctccgcctcagatgccgctgcagaagctgctcttctctgccacgctgaca
cagaacccggagaagctccagcagctgggcctccaccagccccggctcttcagctccatc
cacagtcactccggctctggcacgccgcaggcctccacccagacgcaaggcggcttcgac
ttcccccaagggctgacggagtactacgtgccctgtacgctgagcaaaaagcccctcctc
atcctccacttcatcctgcgcatgaagcacagtcccgtcctctgcttcaccaactccaaa
gagaccgcacacagacttcatctgctggtgcagttctacggggggatccgggtggctgag
ttctcctcccgactctctcccaccgagaggaagaagacgcttaaggagtttgaacaggga
aagatccaactgttgatcagcacagacgcagcggccagaggcatcgacatcaacggggtc
aaatgtgtcgtcaattacgacgcgccgcagtacatcaggacgtacatccacaggattgga
agaacagcgagagcggggaagccgggcctggccttcaccttcctgctgggagtgcaggag
aagaacttccttcagatggtgaaggaagcaggaactcccgggatccagaagcagatcgtt
aaaccagagaacctgaaggggatggaggcccaatttcaacttactctgcaggagctggcc
aacgccatcaaggtaccagctgacaatcattctttaaatgtttaa
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