Gasterosteus aculeatus (three-spined stickleback): 120807642
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Entry
120807642 CDS
T07457
Symbol
rfx6
Name
(RefSeq) DNA-binding protein RFX6
KO
K19521
regulatory factor X 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120807642 (rfx6)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other basic domains
RF-X
120807642 (rfx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
120807642
NCBI-ProteinID:
XP_040015815
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All DBs
Position
XVIII:3040565..3051800
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AA seq
951 aa
AA seq
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MPMKRSSESSARDGVFLIHSLTRTLCSSPEETRTDFMGRTHFHQEEDSGIKSEAEDSNDT
PSSEEDQDLMDINSDLTMEQSIASSRKTISQIIKDKKKQTQLTLQWLEENYIVCEGVCLP
RCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESS
AYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPDFPNAQHLLLQGNISREKV
DTLIMMYKTHCQCILDNAINVSFEEIQNFLLHFWQGMPDHLLPLLENPVIVDIFCVCDSI
LYKVLTDVLIPATMQEMPESLLADIRNFAKHWEHWLASSLENLPECLAAKKLPIARHFVS
SLKRQTSFLHLAQIARPALFDQAVVTSMVLDIDNVDLSSISSQPLLSINSAGDQDPDVYS
EYDSITVFQELKELLRKNATVESFIEWLDSVVEHKVIKPGKQSGRSVKKRAQDFLLRWSF
FGARVMHNLTLNNASSFGSFHLIRMLLDEYILLALETQFNNDKEQDLQNLLDKYMKNADA
SKAAFMASPSSCFLANRNKACAPIDQSVKNESLGEHAYMSLSNNHQQSLQPSGVLYQGTE
SAGFTVSGGQMHYSQASGPLMTPPVSPAALVHRGSVINQTPMTGRPLAASSSSTCSSSSS
SSCPSSLSTMTQPGPCSSYPETLYHCLPQNSSSYFPQTGHSSASSYQAALRPQAQSQCLA
SVQSQASTLAYHLSRYPSFNDPHLSKDVLYSLHQPPNSTNCSMTSYGSGVRPSYTSGSDP
VQTEQGLDAQTAAQILDSGEGFGFVGSGLNSAGSGCPGQTYTGHSGYYSNSSYLDSQRMT
SLVDQHVSVISTISSLRPFQSTYSEVHDPLNILDEPGRKTTGAYFTEANTGADHALPLSG
SAPCMFGVSSPFSSQDALLSQQRGPSSSEVQDVVSSLPPINTVFMGAAGVQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgaaacgcagcagtgagagttcagccagagatggagtgtttcttatacactct
ctgaccaggactttgtgcagctcaccagaggaaacacgcacagactttatgggacggaca
cattttcatcaggaggaagattccgggatcaaatcagaagcagaggacagtaatgacaca
ccatcctctgaggaagaccaggacctgatggacataaactcggatctgaccatggaacag
agcatcgcgtcctccaggaagaccatcagtcagatcatcaaggacaagaagaagcagacc
caactcaccctgcagtggctggaggagaattatattgtgtgtgaaggagtgtgtttgcct
cgatgtatcctctacgctcactacctggacttctgcaggaaggagaaactggagccggcc
tgcgctgctacatttggaaagacaattcgacagaagtttcctcttttaacaacaagacga
ctgggcaccagaggacactccaaatatcattactatggcatcggcatcaaagagagcagc
gcttactatcactctgtgtattctggaaaaggtttgacgagattttccgggagcaagctg
aagaatgagggaggtttcaccaggaaatattctttgagctctaaaactggtacattgctc
ccagactttccaaatgctcagcatcttctgctgcagggaaatatctccagagaaaaggtt
gacactcttatcatgatgtataaaacacactgccaatgcatcctggacaatgccattaac
gtcagctttgaggagatccagaattttctgctccatttctggcagggaatgcccgaccac
ctgctgccactgctggagaaccctgttatagtcgacatcttctgcgtctgcgactccatc
ctctataaggtgttgactgatgttctgattcctgctacaatgcaggaaatgcctgaaagt
cttttggctgatatccgtaactttgccaaacactgggagcactggctggcctcctccctg
gagaacctcccagaatgccttgcggccaagaagcttcccatagcacgccactttgtttcc
tcccttaagagacagacctcgttcttacacctggcccagatagcccgcccggcgctgttc
gaccaggcggtagtgaccagcatggtgttggacatcgacaatgtggatctcagcagcatc
agctcgcagccgctgctcagcataaactctgccggagaccaggacccagacgtctactcg
gagtatgactccatcacagtctttcaggagctgaaggagctgctgaggaagaacgccaca
gtagagtccttcattgagtggctggactcggtggtggagcataaagtcatcaagcccggt
aagcagagcggtcgatcggtgaagaagagagctcaggatttcctcctcaggtggagtttc
tttggtgccagagtgatgcacaacctcacgctcaacaatgcgtccagctttggttccttc
catctgatcaggatgctgttagatgaatacattctgttggccctggagactcagttcaac
aacgacaaggagcaggatctgcagaacctgctggacaaatacatgaaaaatgcagatgcg
agtaaagcggctttcatggcttctcctagttcctgcttcctagcaaatcgcaacaaagcc
tgcgctcccatcgaccaatcggtgaagaacgagtccctgggagaacacgcctacatgtct
ctgtccaacaaccatcagcaaagtctgcagccgagcggcgtcctctaccaggggacagag
tctgctggttttacggtctcaggaggtcagatgcactactcccaggccagcggccccctg
atgacgccccccgtctctccagcagcgttagtccacaggggctccgtcatcaaccagacg
cccatgacggggagacctctggccgcctcgtcttcctccacgtgctcctcctcgtcctct
tcttcctgcccgtcctctctcagcacaatgacccaacccggcccctgctcttcatacccg
gagaccctgtaccactgtctacctcagaacagctccagttacttcccccagacgggacac
tcctcggcctcgagctaccaggctgcactgaggcctcaggcccagagtcagtgtttggct
tcggttcagtctcaagcgtcaaccctcgcctaccatctctcccggtacccctccttcaat
gacccacacctgagcaaagacgtcctctacagccttcatcagccgcctaacagcacaaac
tgctccatgacgtcttacggttctggagtccgacccagctacacttcgggctcggatcca
gttcagactgaacagggactggacgctcagacagcagctcagattctggattcaggggag
gggttcggctttgttgggtctggacttaactctgcgggcagtgggtgtccgggacagacg
tacacaggacacagtggttactacagcaacagcagttaccttgacagccagcggatgaca
tcacttgtggaccagcatgtgtccgtcatcagcaccatcagcagtttacgcccgttccag
tcaacgtactctgaagtccacgatccactcaacatcctggacgaaccgggaaggaaaaca
acgggagcttacttcactgaggctaacaccggagcagatcacgcgctccccttatcggga
tctgctccttgcatgtttggagtttcctctccgttctcgtcccaggatgcactgctctct
cagcagcgagggccttcgtcatcggaagtgcaggacgtggtgtcttcacttcctcccatc
aacaccgtcttcatgggagcagccggagtacaatga
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