Gasterosteus aculeatus (three-spined stickleback): 120807698
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Entry
120807698 CDS
T07457
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120807698 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120807698 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120807698 (rars2)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120807698 (rars2)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
120807698 (rars2)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120807698 (rars2)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120807698 (rars2)
Prokaryotic type
Other AARSs
120807698 (rars2)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120807698 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
RHH_9
Motif
Other DBs
NCBI-GeneID:
120807698
NCBI-ProteinID:
XP_040015939
LinkDB
All DBs
Position
XVIII:complement(7456860..7462323)
Genome browser
AA seq
586 aa
AA seq
DB search
MACFFRRRIAAQLGCTLQQPEDAFIPALAAVPVFKKQQSADFKLSIATLRMSGILPSSGD
IQLQAESLAARVRFMTDDLKRDSVVEDVSAGRGVINFKVNRKLLVQKVLESFGKEEEGQF
GLNSELLNTLTRGTTLVEYSSPNIAKKFHAGHLRSTIIGNFIANLKQCLGNNVIRMNYLG
DWGMQFGLLGAGFAKFGCQEKLKQNPLQHLFEVYVEVNKDVEQNEEMMQAARAFFSQLEQ
HDSEAVSLWQQFREITVDEYQHVYKRLGVHFDIYSGESFHQQQAQQVVQKLQSQGLLKTS
EKGTGVVDLSTAKDMSSVSTVLRSDGTTLYITRDLAAAIDRKEKYHFDEMIYVTDKSQAI
HFQQLFHILLAMGHSWADRCEHVPFGLVRGMKTRRGEVVFLEDVLDEARARMLRNMNQSK
TTKETVNPEDTAEKVGISALIVQDFRGPRESDYTFDWDRMLQAQGDTGVFLQYTHARLHS
LIQRNEGVAAVLFDPSHLLEQTSVPVLQHLLRYDEVLYQSAKDLQPKHLVNFLLKLCHLI
ASAHRELPVKGSSQDVAQARLRLFSGARSVLANGMKILGITPVDQM
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtttcttccgaaggagaatagcggcgcagctcggctgcacgctgcagcagccc
gaggacgccttcataccggctcttgcagcggttccagtttttaagaaacaacagtctgcc
gacttcaaactatcaatcgccacattgcggatgagcgggattttaccatccagcggtgac
atccagctgcaggccgaaagcttggccgctcgggtgagattcatgacggatgacttgaag
cgggacagtgtcgtcgaggacgtatctgccggacgcggagtgatcaactttaaagtgaat
cgcaaacttctggttcagaaagtgttggagtcgtttggaaaggaggaggaaggtcaattt
gggttaaacagtgaacttttaaatactctgacgagaggaacaacattagttgagtacagc
tctccaaatatagccaaaaaatttcatgctggacacttaagatctacaattattggtaac
tttattgctaatctaaagcagtgtcttggtaacaacgtaattcggatgaactaccttgga
gactggggcatgcagtttggtttgctcggggctggcttcgctaaatttggatgtcaggag
aaactgaaacagaatcccttacagcatctgtttgaggtttatgttgaagttaacaaggat
gtagagcaaaatgaggaaatgatgcaggctgccagagcattcttcagtcagctggaacag
cacgacagcgaggctgtgtcgctatggcaacagttcagagagatcacagttgacgagtat
caacatgtttacaagcggttaggagtccactttgatatttactccggggaatccttccac
caacaacaagcccagcaggtggtgcagaagcttcagagtcaaggcctcttgaaaacctct
gaaaaaggaaccggcgtggtggatctctccactgctaaagacatgagcagcgtcagcaca
gtgctccgcagcgacggcacaactctctacatcaccagagatcttgctgcagcaattgac
cgaaaagaaaagtaccattttgatgagatgatttatgtgacagataaaagtcaagcgatt
cacttccagcagttgttccacatcctgctcgctatgggacattcttgggctgacaggtgt
gagcatgtgccctttggcctggtgcggggtatgaagaccaggaggggtgaggtggtgttt
ctggaggacgtgctggacgaagctcgggccaggatgctccgcaacatgaaccagtcaaaa
acaacgaaggagacggtcaacccagaagacacagcagagaaagtggggatcagtgctcta
atagtgcaggacttcagagggccgcgggagtcagactacacatttgactgggacaggatg
ctgcaggcgcaaggagacacgggagttttcctccagtacacacacgcccgactccacagt
ctaatacagaggaacgaaggcgtcgcagcagttctgtttgatccgtcccacctgctcgag
cagacgagcgtccccgtcctgcagcacctccttcgctacgatgaagtcttataccagtca
gccaaggatctgcagcccaaacacctggtcaactttttattgaagctgtgccacctgatc
gcctcagcacacagagagctgccagtgaaaggaagctctcaggatgttgcacaggcaagg
ttacggctgttcagtggggcccgctcagtcctggccaatgggatgaagatcctgggcatc
acaccagttgatcaaatgtga
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