Gasterosteus aculeatus (three-spined stickleback): 120807719
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Entry
120807719 CDS
T07457
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040
Spliceosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120807719 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120807719 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120807719 (srsf5b)
Spliceosome [BR:
gat03041
]
Common components
Common spliceosomal components
SR proteins
120807719 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120807719
NCBI-ProteinID:
XP_040015968
UniProt:
A0AAQ4NUN6
LinkDB
All DBs
Position
18:complement(6651042..6655681)
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AA seq
316 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDAEDAVYELDGK
ELCSERVTIEHARVRLRGGRGRGAGVGGGGGGGGAGGRFPDRFGRGSQNSRSRNPPPMRT
ENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASGSDLKNAMDKLSG
KEINGRKIKLIEATRKRSRSRSRSDSSSRSRSRSRGRSASRSPRRSRSPPHKPHNRSHSR
SHSRSRSRSRSHSRSRSHSPSRSPVGGSLSPGSKSKEAAKRLSKTSKSATPPSPPPAQRA
SRSRSRSRSPSTDSQR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtattttcatcggccggctgagtccctctgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagagaggcttcggc
tttgtggagtttgaggaccccagagacgctgaagatgctgtttatgagctcgatggcaaa
gagctgtgcagtgaaagggtcactattgagcacgcccgcgtccgtctgcgcggcggccgt
ggcagaggcgctggagtcgggggtggaggcggaggcggaggtgcaggaggacgtttccct
gatcgctttggccgcggctcccagaacagtcggagccgaaatcctcctccgatgcgcact
gagaaccgcctgatcgtagagaatttgtcctctcgagtcagctggcaggacctgaaagat
ttcatgagacaagctggagaggtgacatttgcagacgcacatcggcccaagctcaacgaa
ggggtcgttgagtttgcttctggcagcgatctgaaaaatgccatggacaaattgtctgga
aaagaaatcaatggcaggaaaatcaagctcattgaggcaaccaggaagaggtcgagaagt
cgttcccgttctgacagctcctctcgctcccggtcccgctctcgtggtcgctcggcgtct
cgctccccaaggcgttcccggagccccccccacaagccccacaaccgctcccattctcgc
tcccactcccgttcccggtcccgctctcgctcccactcccggtcccggtcccactccccc
agcaggtccccggtcggcggctcgttgtctccgggctccaagtccaaggaggccgccaaa
cggttgtccaagacgagcaaatccgccaccccgccgtcccctccgcccgcccagagagcc
tcccgctcccgctcccgttctcgctccccttctaccgacagccagcgctaa
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