Gasterosteus aculeatus (three-spined stickleback): 120807771
Help
Entry
120807771 CDS
T07457
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120807771
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120807771
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120807771
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120807771
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Protocadherins
120807771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6899
Motif
Other DBs
NCBI-GeneID:
120807771
NCBI-ProteinID:
XP_040016058
LinkDB
All DBs
Position
II:7495452..7500378
Genome browser
AA seq
872 aa
AA seq
DB search
MFHCRHPSLSKRGGIWGLCILLLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFTVKPPFLFSLPKKKVNGQYVNLNNTTGELYTSATEIDREKFCPYHSDGRGCFLSL
DVFVLPQQYFQLVKVKIFIEDVNDNRPKFSVDEIRISVPENTPINARYAVEQSAVDPDLG
VHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVIEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQLNVTLHGNATKGSTLARLNAFDPDLGANAQISYAYS
ERVPRDVRSLFHLDRITGFIKLAGKIDTGTATFYKLTILANGPGCIPAVATVFVYLIKVV
TGPPAVIPRYITPEKDGVVTIKESEPAFSPIAFYTVKNIGMNQKVDCHLEGSGPFRLVPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNSHALVIKTFLKVQVLDENDNVPVFQQSWM
EISVEENNPPNTFLTQLQATDQDSEGRGEVIYLLGGNAPGIFVVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVSVLDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVADADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSCVTMVTVLLVDVNDNPPIVLFPQSNQSYMLVLPDTLPGTSITEVYAVDKDTGMNAVI
AYSIVKRKGGEPGSFAIDPETGNITLKRELSIRGLYRLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIHSLLTREAEVEVEERPWYKGQMTEGPERYELFPCQPLLIALSVTCLGLF
FSVVTLTSYICCRRFKKRKRKKRSEVEIPLKI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgttccactgcagacaccccagccttagcaaaagaggagggatatggggtttgtgcatc
ctcttgctttacaccagccccctttcctgttttgcgaatttcagccaggcgaaagagctg
atttataagataaaggaaggattacccagggggacctttattggggccattggagtagac
ttaaatttggatttcactgtgaagcccccctttttattcagtctcccgaaaaagaaggtc
aatggacagtatgttaacctaaataataccaccggggagctttatacatctgctacggag
atcgacagggagaaattctgcccatatcactcagacggacggggttgcttcctctcactg
gatgtgtttgtgttgccccagcagtactttcagctggtcaaagttaagatcttcattgag
gatgtaaatgacaacagacccaagttctctgtggatgagatccgtatatctgtcccagaa
aacacaccaatcaatgctcgttatgcagtggagcagtcagcggtggacccggaccttggt
gttcacggagtgcagacctactggctggtcaacgactttggaatgttcacactggatgtt
gaggaaaatgagggaggtgagttgacacccttcctcattgtgatagaggctttggacaga
gagacccaggctgaatacatcacagatatcattgcagaggacggagggacccctcctctg
cttggagcggcgacattgaaaattgtcatcacagatgtgaatgataactgcccccaattc
acagagtcgcaactgaacgtcactttgcatgggaatgccaccaaagggtcgactttggca
cgtctgaacgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgcgtgccaagggacgtcaggagcttgttccatttggacagaatcactgggtttatc
aagctagcagggaaaatagacactggcactgccacgttttacaaactcaccattttggcc
aatggacctggttgtatccctgcagtggctactgtttttgtctatttaatcaaagttgtt
acaggaccccctgctgtcataccccgatatataacaccagaaaaggacggggtggtgacc
ataaaggagtctgaacctgcgttttctccaatcgctttttatactgtcaaaaacattggc
atgaaccaaaaggtggattgccatttggaagggtccggccccttcaggcttgtcccctac
cagcttttaaaaaacgaatacctgttggagactacagagcccttggactatgagaagaca
caggagtacgagcttattgtggttgccaaaaattctcatgcacttgtcatcaagaccttt
ctcaaagtgcaggttttggatgagaatgataacgtaccagtgtttcaacagtcttggatg
gaaatatctgtagaggagaacaacccaccaaacacctttctgacccagctccaggctaca
gaccaggacagcgagggcagaggggaagtcatctacctccttggcggtaacgccccgggg
atcttcgttgttgatcgcgtgaccggcgtcctgaccgtaaccacctcgcttgaccgcgag
gagaaggagacataccggttcatagtgagagcagtggatcaggggacgcccaggagggag
tccattgcaactgtggtggtgagcgtgctagaccgcaatgacaacagtccgcgcttcatc
aacaaggacttcacgttctttgtgcccgagaacttcccggggtacggggaaataggagtc
ctctctgtagcagatgccgatgctggagaaaatggttgggttgccctttccatcctcaat
ggcagcgatatcttcatgatagacactggccgaggtgcactgagggcaaagacatcactc
gaccgcgagcaacaagggacataccagctgtggattgaggccgtggatggtggagagcct
gcgctttcctgcgtaactatggtgactgtgctgctggtggatgtaaatgacaatcctcct
attgtcctcttcccccagtccaatcagtcttacatgctggttttacccgatacactaccg
ggaacatcaataacagaggtctacgctgtggataaggacacgggcatgaatgctgtgatt
gcctacagtatcgttaagaggaaaggtggcgagccaggttccttcgccattgacccagaa
acaggaaatatcacattaaagagggagcttagcatccggggcctatacagacttctggtc
aaggtcagtgaccatggtcagcctgagccgctttactcaacagtgatggtcaacttcttt
gtcaatgaaaccgtgagcaacgagagctacatacacagcctgctgaccagagaggctgaa
gtcgaggtagaggagagaccgtggtacaaaggccagatgacagaggggcctgagcggtat
gagctgttcccctgtcagcctctcctcattgccctatcggtgacatgtctggggctgttc
ttctcagttgtcacactgacatcttacatatgctgtaggagatttaaaaaaagaaaaaga
aagaaaagatcagaggttgagatacctttgaaaatatga
DBGET
integrated database retrieval system
