Gasterosteus aculeatus (three-spined stickleback): 120807837
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Entry
120807837 CDS
T07457
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
gat04148
Efferocytosis
gat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120807837 (vps18)
04148 Efferocytosis
120807837 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120807837 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120807837 (vps18)
Membrane trafficking [BR:
gat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120807837 (vps18)
Hops complex
120807837 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
DUF1664
zf-RING_5
zf-C3H2C3
zf-ANAPC11
zf-RING_UBOX
zf-RING_11
zf-RING_2
zf-rbx1
zf_RING_Vps8
DUF4446
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
120807837
NCBI-ProteinID:
XP_040016182
UniProt:
G3PHS2
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All DBs
Position
XVIII:complement(14967986..14972719)
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AA seq
982 aa
AA seq
DB search
MASILDGYEDSQNTRQSAQQQSRLSTANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDDSKVHRLFLDPTGSHLLICL
STSECLYLNRNTQKVRGLSRWRGHLIESVAWNKHLGNETSTGPVLVGTSQGIIFEAEISA
TEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFSQNHDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWDYTPDIDLSLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGALKKMIKDPVGGLVWIYTERAVFRYHIQRESRDVWQMYMSMSKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKASERTQITLLVTWLAELYLNRLGQLESDGNAVAFKETRDEFHQFLCNGKHKDCLF
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYGAALDVLSKHCDQKLFYK
FSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELT
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTRASEIHYDLKYALRLCAENGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIDELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACEFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLTPFKQSRLEE
LQKKLAAAAPSSKSRHRPAAKDEGDTGSLGKGSAGTSREQIKSDMDDIIASECVYCGELM
IKTIDKPFIDPERFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgattctggacgggtacgaggactcgcagaacaccaggcagagtgcgcagcag
caaagccgcctgtcgaccgccaacatcgggatcacgcattcgggctttgtgaacgtgagg
ctcgaggaagagaagccgatattcaacaagcagaggatcgacttcacccctcccgagagg
ataaaccacctcgcggtgtgcaacaaccagctgtgcatgagtctggggaaggacaccctg
ctgaggattgacttggccaagcccgatcagcccaaccagatcgaattaggaaggaaagat
gacagtaaggtgcacagactgttcctggaccccactggctcccatctgctgatctgcctg
agcaccagcgagtgtctgtacctcaacaggaacacgcagaaggtgcgcggtttgtcccgc
tggaggggacacctcatcgaaagcgtggcctggaacaagcatctgggcaacgagaccagc
acgggaccggttttggtcggcaccagtcagggcatcatcttcgaggcggagatctcggcg
actgagggcagcctgttcaacaccaatccggatcaatacttcagacaggtccactccctg
gaggaggatgggaagcccgcacccgtctgctgcctggaggtggagcggggcctggagaac
aagtacttcatcatcgccaccacccgcaagcgcctgttccagttcgtgggcaaggtggcc
gagggctcggagcagcagggcttcagctccatcttcagccagaaccacgacctgctgccc
agcttccaggagttcccggccaacatgggctacagcgagatcaccttttacacctccaag
ctgcggacttccccgaaggcgttcgcctggatgatgggtaatggagttctctacggtcag
ctggactacgtccggcccgattccctgctgagtgatgtgcaggtgtgggattacaccccc
gacatcgacctgagtctcaacaagcccatctccattgtgctgacacagttccacttcctg
ctgctgctccacgaccgagttaaagccatctgcaccctgaacggacaggtggtgtacgag
gacgtgttcccagataaattcggcgccctcaagaagatgatcaaggaccccgtgggcggc
ttggtgtggatctacaccgagcgggcggttttccgctaccacatccagcgcgagtccagg
gacgtgtggcagatgtacatgagcatgtccaagttcgacctggccaaggagtactgccga
gaccgcccggagtgcatggacatggtgctggccaaggaggcggagcactgcttccagaac
aagcggtacctggagagcgccaagtgctacgccctgacgcagaactacttcgaagagatc
gcgctcaagttcatcgaggccaaacaggaggaagccctgaaggagttcctgctgaagaag
ctgaacaatttgaaagccagcgagaggacgcagatcaccttgctggtcacctggctggcc
gagctctacctgaaccggctcggccagctggagagcgacggcaacgccgtcgccttcaag
gagacgcgcgacgagttccaccaatttctctgcaacggcaagcacaaggactgcctgttc
aacaaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggtcgtcatgcaggactacgagcgggtgatatcgcactactgccagcacgac
gactacggcgcggccctggacgtgctctcgaagcactgcgaccagaagcttttttacaag
ttctcccccgtcctcatgcagcacattcccaaaaaggtggtggacgcgtggatccagatg
ggcaagcggctggacccgaagaagctcatcccggctctgatgaactacagccagatgggc
agcacccagcagatcagcgagaccatccgctacatggagttctgcgtgtacgagctgacc
gtgacggaggaggccatccacaactacctgctgtccctctacgccaagtacaagccggac
tctctgctgtggtacctggagcaggcgggcacgcgcgcctcagagatccactacgacttg
aagtacgccctcaggctgtgcgcggaaaacggctacctgcgggcctgcgtcctggtctac
aggatcatggagctgtacgaagaggccgtggatctcgccttacaagtagatgtggacttg
gccaagtcatgcgcggacctgcccgaagacgacgaggagctgaggaaaaagctttggctg
aagatcgcccggcacgtggtgcaggaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcaacctgctcaagatcgaagacatcctgcccttcttcccagactttgtcacc
atcgaccattttaaggaggccatctgcagctccctggaggagtacaaccagcacatcgac
gagctgaaacaggaaatggaggaggccacggagagcgccaagcgcatccgagaagacatc
caggagatgaggaacaaatacggcgtagtggattcccaggaaaagtgtgccgcttgtgaa
ttcccgttgctcaacaggcctttctacctgttcctatgcggacacatgttccactacgac
tgcctgttccaggaagtcacccctcacctgacgccctttaagcagagtcgtctggaggaa
ctgcagaagaagctggccgcggccgccccgtcctccaagtctcgacaccggccggcggcc
aaggacgaaggagacaccggcagcctggggaagggcagcgcgggcacgagtcgcgagcag
atcaaatcggacatggacgacatcattgcgtccgaatgcgtgtactgcggcgagctgatg
atcaagaccatcgacaagcctttcattgacccagagagatttgaggaggagaaatccagc
tggctatga
DBGET
integrated database retrieval system
