Gasterosteus aculeatus (three-spined stickleback): 120807875
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Entry
120807875 CDS
T07457
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120807875 (lama4)
04518 Integrin signaling
120807875 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120807875 (lama4)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120807875
NCBI-ProteinID:
XP_040016249
UniProt:
A0AAQ4PLF4
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Position
18:4373424..4448855
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AA seq
1880 aa
AA seq
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MAAESLTCLCVLYILSGISYPASAARLGEQQQLLLKVCAKGFFLSEQSICLPCNCKGHAD
YCEDITGVCINCRDHSTGDFCEMCEDGHMLARSLDGQHSCPPCACPLSVHSNNFAVRCDK
GGGSLRCKCQEGYAGHLCERCSPGFYGNPMVIGNSCKRCNCNSNSDPNLIFNECHNVTGH
CQHCWGNTAGANCERCAPGFYGDAISAKNCKECECNACGTSSCDDRKGVCHCKPGVTGRL
CDQCEEGYFGFSGCQGCRRCECGPASIRPTCHPLTHSCPCRPGAGGRYCERCLPGYWDYS
SAGCQKCDCESGHCDMHTGECLAESATVNLCNISCDECIWHLIGDLRMSNKTLDQLKVGV
LNISTGAAANDRLKYYNYTAQQLQTQFQGWRNKSSLIKPQTLELEKATDAVVMDIKQLGE
SESVVKTLGNVLQNDTLETVTLAEQLSTNLTDLNLRIEEMIHDWELYSVHQDVDPEVAKQ
NTEQAYAMVTWMRALDLSPREPIATDESTEAHDLLRRIRQLEKKLMITDGRLSPVREILS
RLSAKLSDAQSFLQKASGTVQETEDMNRASILKLQRSEVKQQRLVEDLATVNNTLGIARG
SISETNRTLVEVDAMGENLTKYHAAIDGAGQRLMEKTERLSLADRDLVQRADVHANELNR
QANELEDDLRKSDANGFVQKAISAANVYNNIVKYIDDANITSLTTHNLSHRAEDAITGIN
MQLKYLVRQSNQVLKESVSLRSEQDVVEHEVADKLIYIEETKETVGKNTQKLAEIVEDIS
GIHADRTPQRLEFTLSVAEGTLNHSAEVLHTINPISTKVEKWANNMKKNDYSTVAYEQAV
LSAGEAVESLNVLVPKLLDKLKVVEEKKPVNNVTTNIMRIRELIAQARSVAKKVQVSMKF
NGQSLVEIHPHSNPEDLKTVTSISLFLRVDPDKDPIEDRFILYLGNRNGSKDYMGLAIKS
DNLVFVYNLGGEDVEISLGSKPVSQWPAVFNYIKVERLGRHGKVFLTIPSQSSNDEQKFI
QKGVAPGTDSLLDLDPKDIVFFVGGVPQDVRLPPLLSLAPFVGCIELGSLNNDVISLYNF
KETHKMNVVTSTPCLRYKLAFSQSRIASYLFDGTGYALINNIERRGKFGVVTRFDISVRT
VANNGVLLLMVNGDNFFLLELKNGFLRLMYDFGFSKGPLLMENNSSKLQINDARYHEVSL
IYHQSKKVILLVDKSHVKSFENPKTTLPFSDIYIGGAPSSILKSRPELSAVVGLKGCVKG
FQFQKKDFNLLEEPGTIGISSGCPEESFMSRTAYFTGESYLGSTAKISPFDNFEGGLNFR
TLQPIGLLFYLNEGSDEFSISLENGAVVLNSRGTRVKSHKKQYNDGRIHFLVASVNNQKY
SLMVDDRDKQEKKRPSSASRSSSGSEVKTFYYGGSPSSNFKNFTGCISYAYINRQDRDIE
PEDFQRYTEKVQTSLQDCPVQRPPAALLSRHREQTSRAKQGPSHKVSKEMSSLPLGLMEL
KSDDQEPYDLNVEPCYLSSSPRATRQAFHYGGLANSRQHYKDLPDSFSKRSHFSLSLKTH
SSFGLIFYVSDVQEENFMALFLAHGKLVYTFNVADQRVKIRSEEKYNDGAWHNVVFIRDG
SIGRLIIDGLTLLQDRVQEGNISWNVTSPFYVGGVPPDRAQKNIQRNSAYSFTGCLKNIQ
LDGQWLSSVSETFGVTPCFEGLSEAGTYFSKDGGYVVLDETFNLGLKFELRMEVRPRMAS
GVLLNVRTSEGYFTVYLHQGAVVVLVNEGSHEFFTKVSARHGLCTGKWHRITVIRDANVV
QLDVDSEVNHVVGPLDSGSTDTRKPLFIGGAPDLFLPESITTRSPYVGCMRNLTINNSRV
SFSKAVLASGAVSVGTCPAA
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaatctctgacatgcctctgcgttctctacatcctatcagggatttcctat
ccagcttctgcggccaggcttggggaacagcaacagttgctgctgaaagtgtgtgcaaag
ggattcttcctgagtgaacaaagcatatgcttgccgtgtaactgtaaaggccacgcagac
tactgtgaagacatcactggcgtttgcataaactgcagggaccacagtactggggatttc
tgtgaaatgtgtgaagatggccacatgctcgctcgcagcctggacggacagcattcctgc
ccaccctgcgcctgccccctctccgtccactccaataacttcgcagtgcgctgtgacaaa
ggaggtggcagtctacggtgcaagtgccaagagggctacgccggacatctctgtgagagg
tgttctccgggcttttatggcaacccaatggtgatcggtaattcctgtaagcgatgcaac
tgcaacagcaactccgaccctaacctgatcttcaacgagtgtcacaacgtgacgggccac
tgccagcactgctggggaaacaccgccggcgccaactgtgagaggtgtgccccgggtttc
tacggtgacgccatcagcgccaagaactgcaaagaatgtgagtgcaatgcatgtggcacc
tcttcatgcgacgacaggaaaggagtgtgtcactgcaagccgggtgtcaccggacgactc
tgtgaccaatgcgaggagggctacttcggtttctccggctgtcagggctgccggaggtgt
gaatgcgggccagcttccattcgtcccacctgccatcccctcacccacagctgtccgtgt
cgtccaggcgccggaggtcgttactgcgagcgctgccttccaggctactgggactacagc
tccgccgggtgccagaagtgtgactgtgagagcggccactgtgatatgcacacaggagag
tgcctagcagagtctgcaaccgtcaatttgtgcaatatcagttgcgatgagtgcatttgg
catctaatcggggacttgcgtatgtccaataagacgttggaccagctgaaagtcggagtg
ttgaacatctccactggcgctgctgccaacgacaggctcaaatactacaactataccgcc
caacagctgcagacccagttccaaggctggagaaacaagtcatctttgattaagcctcaa
actctggagctcgagaaggccacagacgctgtggtgatggacatcaaacagctgggcgaa
tcagagagtgtggtgaagactctcgggaatgtactgcaaaatgacacgctagagactgtc
accctggctgagcagctcagcacaaacctcactgatctcaacctacgcattgaagagatg
atccatgactgggagctgtacagtgttcaccaggacgtggatccagaggtagccaagcag
aacactgagcaggcctatgcaatggtcacctggatgagggcactggatctgtccccacgg
gagcccatcgcgaccgatgagtcaactgaagcccacgacctgctgaggcgcatacgtcag
ttggagaagaagttgatgatcacagacggccgcctatcacctgtcagggagatcctctcc
cgcttatccgccaagctgtcggacgcacagagcttcctgcagaaagcgtccggcaccgtc
caggagacagaggacatgaacagagccagcatcctcaaattacagaggagtgaggtgaag
cagcagaggttggtggaggacctcgccactgtgaacaatacgctgggaattgccagaggc
tccatctctgagacaaaccgtactctggttgaggtggatgccatgggtgagaacctgaca
aagtaccatgcagcaatcgatggcgccggccaaaggctgatggagaagactgaacgtctc
tcgctggccgacagagatctggtgcagagggccgatgtgcacgccaacgagctgaacaga
caggccaatgaattggaggacgatctgagaaaaagtgatgccaatggcttcgtgcagaaa
gccataagtgccgccaacgtctacaacaacatagtgaaatacatcgatgatgccaacatc
acatcgctcaccacccacaacttatcccatcgagctgaagacgccatcactgggataaat
atgcagcttaagtacctagtaaggcaaagcaaccaggttttaaaggagtctgtttcatta
cgttcagaacaagacgtggtcgaacatgaggtggctgacaagcttatatacatcgaggag
accaaagagaccgtgggtaaaaacacccaaaaacttgcagaaatagtggaggatataagt
ggaattcatgcagacagaacaccacagcgactggagtttaccctcagtgtggcggagggg
actctcaaccactcggcagaagtccttcacaccatcaaccccatcagcaccaaagtggag
aagtgggcgaacaacatgaaaaaaaacgactactctacagttgcttacgaacaggctgtc
ctttctgccggtgaagcagtggagagcctgaatgtacttgttcccaagctgctggacaag
ctgaaggtggttgaggagaagaagcctgtcaacaacgtgaccaccaacatcatgaggatc
agagagcttatcgctcaagccaggagtgtggccaagaaggtccaagtgtccatgaaattt
aacggtcagtctttggtagagattcatcctcacagcaacccagaagaccttaagacggtg
acatccattagcctgttcctgagggtggatcctgacaaggatcccatagaagaccgattc
atcttgtacttgggaaacagaaatggtagtaaagactacatgggactggctatcaagagc
gacaacctggtgttcgtgtacaacctcgggggggaagatgttgagatctcattgggttca
aagcctgtcagccagtggcccgcagtctttaactacatcaaagtggaaaggctgggcaga
catggaaaagtcttcctgaccatccccagccagagctcaaacgacgagcagaaatttatc
cagaaaggcgttgctccaggcacggactcactgcttgacctcgaccccaaggatattgtg
ttctttgttggtggtgtcccccaagatgtcaggcttccacctcttctgagtcttgctcct
tttgtgggctgtatcgagttgggttcgctgaacaacgacgtgatcagtctatacaacttc
aaagagactcacaaaatgaacgttgttacatcaactccgtgcctcaggtacaagttggca
ttttcccagagtcgcattgctagctacctgtttgatggaacgggctacgcactcatcaat
aatattgagaggaggggcaaatttggtgttgtcacacgatttgatatttctgtgcgaact
gtcgccaacaatggtgtccttttactcatggtcaatggggataatttcttccttttagag
ttaaagaatggcttcctgcgcctaatgtacgattttggcttcagcaaagggccactactt
atggagaataactcatcgaagctgcaaataaatgatgcgcgataccatgaggtgtcctta
atctaccatcagtcaaagaaggttatcctactggtggacaagagtcatgttaaatcattt
gagaatccaaaaaccacactgccgttctctgatatctatatcggaggggctccctcgagc
attctcaaatccaggcctgagctgtctgctgtggtaggcctgaaaggctgtgtgaaaggt
ttccagttccagaagaaagacttcaatctgctggaggagcctggaaccattggtatcagc
agcggctgcccagaggagtcctttatgtcccggacagcttatttcaccggagagagctac
ctgggctccacagcaaagatttcccccttcgacaactttgagggaggactcaacttcaga
acgctacagcctatcggactcctcttctatctgaacgaagggtctgatgagttcagtatc
tctctggagaatggagccgtggtgctgaactccagaggcactcgagtaaaatcccacaag
aaacaatacaatgatggaaggatacacttcttagtggcctcggtgaacaatcagaagtat
tcactaatggtggacgacagagacaagcaggagaagaaacgtccgtcatctgcctcaaga
tcctcctcaggttctgaagtgaagaccttctattatggagggtcgccaagcagcaacttc
aagaatttcacaggctgcatcagctacgcctacatcaacagacaggaccgggacattgag
ccagaggacttccagcgatacacagagaaggttcagacgtccctgcaggactgtccagtc
cagcgcccccctgctgctctgttgtcaaggcacagggaacaaacttctagagccaaacag
ggcccatcacacaaggttagcaaggagatgtccagcttacctctgggcctgatggaactg
aagagtgacgaccaggaaccatatgacttgaacgtcgagccatgttacctctcctcaagt
cccagagcaacccgccaagccttccactacggcggtctcgccaacagcaggcagcactac
aaagacctcccagactccttctccaagaggtcccacttctccctgtccctgaagacccac
tcgtcgtttggcctcatcttttatgtatcggatgtccaggaggagaacttcatggctctc
ttcctggcccacgggaagcttgtgtacaccttcaacgtagcggaccaaagagtcaaaatc
aggagcgaggagaaatacaacgacggtgcttggcataatgttgttttcatccgtgatggg
agtattgggcggttaataattgatgggctcacattgctgcaagacagagttcaggaaggc
aacatctcctggaatgtcaccagccccttttatgtcgggggagttcctccagatagggcc
caaaaaaatatccagagaaactctgcgtacagcttcaccggctgcctgaagaacattcag
ctcgacggacagtggctgtcctccgtgtcggagacttttggggtgaccccgtgcttcgag
ggactctctgaggcgggaacatacttctcaaaagatggaggatatgtcgtgctggatgaa
acattcaacctgggattaaagtttgagctgaggatggaggtgcgtccccgcatggcatcg
ggggtgctgctgaatgtgcgcacctccgagggctacttcaccgtgtaccttcatcaaggg
gcggtagtggttcttgtgaacgaggggtcccatgagttcttcacaaaggtgtcagcgaga
catgggctgtgtaccggcaagtggcacagaattactgtgatccgtgacgccaacgtcgtc
cagctggatgtggactctgaggtcaaccacgtggtgggccctctggactccggctccacg
gataccaggaagccattgttcattggcggagctccagatcttttcctcccagagagcatc
accaccaggagcccctacgtcggctgcatgaggaacctgaccatcaacaacagcagagtg
agcttcagcaaagctgttctggccagtggggcggtcagcgtcgggacctgtcctgcagca
tga
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