Gasterosteus aculeatus (three-spined stickleback): 120808023
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Entry
120808023 CDS
T07457
Name
(RefSeq) poly(A) polymerase type 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120808023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120808023
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
120808023
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
120808023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
120808023
NCBI-ProteinID:
XP_040016517
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Position
18:complement(3309089..3315423)
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AA seq
625 aa
AA seq
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MSRPRKSPDASPPAPPRRYGISGPISEDQPSEDQLILTEQLIKTLATCDAFVDDLELRRR
ENAVEQLESLFKEWLTEICKELNIPDHVTEKVGGKIFTFGSRHLGVDSKGDDVDALCVGP
RFIQRNDFFTSFFEKLRVQKEVKDIRTIQSTCVPVITMSYEGIKIDLLFASVDRNSIPQN
LDLSNSLLKNSSVTCIRSLNGYRVTEEILRSVPNVQSFKLVLRAIKLWAKRRNIYSSMLG
FLGGVSWAILVARICQVYPNATASTLVNKFFKVYSMWKWPVPIELKRPEDYNMNLPVWDS
RINPSDRCHVMPIITPTYPQQNTAFNVSLSTLAVWMEEIQWGLAVTQDIQENKADWLELF
QEPDFLNKYQHFILLHASSAAGKQHLEWVGLVESKIRLLVENLERHVYVKRAHINPQSTS
GSSRLCAKDDQSTKWLIGLLFNMGESKRQKIDMTFPLMSFTDTIYSLADSCKVYKEGMTI
SARYLAKDQLCWKVPNRTGRMQSSRDKKASAAHRSSRPAAPSADPRHPKRRRSPQPEVSS
KRVRSCEEATEGPRSESAGVSISAGPSEGVSPLSTKRPEPEATSRRVKLELNPPVVELLD
LPSELTGPPAAVRRAIEITLVRKRN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtccgcgtaagagcccagatgcgtcccccccggcgcccccccggcggtacggg
atcagcggccccatcagcgaggatcagccttcagaagaccagctgatcctgaccgaacag
ctgatcaagactctggccacgtgtgatgcgtttgtggacgacttggagttgcggcgcaga
gagaatgctgtggaacagctggagtcactatttaaggagtggctcacagaaatctgcaaa
gagctgaacatacctgatcatgtgacagaaaaggttggaggcaagatcttcacattcggg
tcccgtcatctgggggtcgactctaaaggtgatgatgttgacgccctctgtgtcggaccc
agattcatccagagaaacgacttcttcacctctttctttgagaagctgagggttcagaaa
gaggtcaaagacattcggaccattcaaagcacgtgtgtccccgtcatcacaatgtcttat
gaggggattaagattgacttactctttgccagcgtggatcgcaacagcatcccccaaaat
ctggatctgagcaacagcttgctgaagaactcaagcgtcacatgcatcaggagtctcaat
ggctacagagtcacagaggagatcctgaggtcggtgccgaatgtgcagagctttaaactg
gttttgagagccatcaagctgtgggccaaacggcgaaacatttactccagcatgctgggc
ttcctggggggggtgtcatgggccatactggtggccaggatctgtcaggtctacccgaac
gccacagcgtccaccctggtcaacaagttcttcaaagtttacagcatgtggaagtggccg
gtcccaattgagctgaagcgtccggaggattacaacatgaacctcccagtttgggattcc
aggattaatccaagcgaccgttgccacgtgatgcccatcatcaccccgacgtacccgcag
cagaacacggccttcaacgtgtctctctccaccttggccgtgtggatggaggagatccaa
tggggcctggccgtcactcaggacatacaagagaacaaggctgactggttggaactgttt
caagagccggactttttaaacaagtaccaacatttcatcctgttgcatgcttcttcagcc
gcagggaagcagcacctcgaatgggtcggcctggttgagtctaaaatccgactgctggtg
gaaaatctggaaagacacgtgtacgtcaagcgggcccacattaacccacagtccacctct
ggatcgagccggctgtgtgccaaagacgaccagagcaccaagtggctgattggactgctc
ttcaacatgggggagtctaaaagacagaaaatagacatgaccttccccctcatgtccttc
accgacacaatctacagtctggcagacagctgtaaggtctataaagaggggatgaccatc
tcggcccgatacctggccaaggaccagctctgttggaaggtgccaaacagaaccggccgc
atgcagtcgtccagggacaagaaggcatctgcggctcaccgctccagccgacctgcggcg
ccctccgccgatccccggcacccaaagagacgccgttctcctcagccagaggtctcatcc
aaaagggtcagatcttgtgaggaggcaaccgagggcccccgttctgagtcggccggtgtc
tcgatcagcgcgggtccgtccgaaggtgtgagcccgctgagcacaaagagacctgagccc
gaggcaacaagccgcagagtcaaacttgagctgaacccacccgttgtggagctgttggac
ctgccctccgagctcactgggccgcctgcagctgtaagacgggccatcgagattacactg
gtcagaaagcgtaactga
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