Gasterosteus aculeatus (three-spined stickleback): 120808321
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Entry
120808321 CDS
T07457
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120808321 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120808321 (capn3b)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120808321 (capn3b)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C2: calpain family
120808321 (capn3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
DUF3348
Motif
Other DBs
NCBI-GeneID:
120808321
NCBI-ProteinID:
XP_040017094
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All DBs
Position
XVIII:complement(9460118..9469538)
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AA seq
771 aa
AA seq
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MGDKKRKAPLVEDTKARVLFETETSLEAEEKADYPSAGTNSIYSAILSRNEAVKDAKRLK
TFLELRDKYVKKNVVFEDPLFPANDSSLFYSHKPAMKFEWKRPSEICENPQFIIDGAKRT
DICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVIVD
DRIPTCNNHLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFF
DLPEAPKELYSIMRKALERGSLMGCSIDALSATEQETRTDQGLVRGHAYSIIGLAECDGV
EKDTTIRLIRLRNPWGWVLWKGPWSANSTEWSTISIADKDNLIKQTVQESEFWMSFADFT
RNFTKLEMCNLTPDALGCDERQSWTVSVNEGRWVRGSSAGGCRNFPQTFWTNPQYRLQLY
EDDDDPEDGQAACTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKDFF
LYTASKAKCKTYINLREVTERVHLPQGEYAIIPTTFEPHQDGEFILRVFSEKKSTSEEVE
DTIGSEKTQQDRKKKEKPIVFVSDRARANKEIEHDGIEGEKKTKKKPKRKLLQPEEETEE
EKHFRAIYQKVAGEDMQICANELRTIMRNVLAKHNEMKTEGFSLETCRSMIALMDTDGTG
KLNLQEFKHLWKKIKEWQLIFRRYDENKTGCVSSFEMRNAVNDAGFHLNKQLYDIIAMRY
ADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTVYS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggggataagaaacgcaaagcgcctctcgttgaagatacgaaggcgagagtgcttttt
gaaaccgaaacatcacttgaggccgaggaaaaggcggattacccttccgctggcaccaac
tccatctactcggcgattctgagcagaaacgaggccgtcaaggatgccaagcgtctcaag
acgtttttggagctgcgggacaagtacgtgaagaagaacgtggtgtttgaagaccccctg
ttccccgcaaatgactcctcactcttctacagccacaagcctgccatgaagttcgagtgg
aagcgtccctcggaaatttgtgaaaacccccagttcatcatagacggagccaaaaggaca
gacatctgtcaaggagaattgggtgactgctggctgctggctgccatcgcctgtctgacc
gtcaacgagaagctgctgtaccgagtgattcccccggaccagagcttcaccgacaactac
gccggcattttccatttccagttctggcgctatggcgaatggatcgatgttatcgtggac
gatcgcatccccacctgcaacaaccatctggtgttcaccaaatctttcagaaagaacgag
ttctggagcgctcttctggaaaaagcttatgccaagttgcacggctcttacgaagccctg
aaagggggcaacactttggaggccatggaggatttcactggcggggttactgagttcttc
gacttgcccgaggcgcccaaagagctctacagcatcatgaggaaggcgctggagagaggc
tcgctcatgggctgctccatagatgctctttcggccactgaacaggagacccggacggat
caggggctggtcaggggtcacgcctactccatcataggtttggcggagtgtgacggggtt
gaaaaggacaccacaattcgcctgattcgcctgcgtaatccctggggttgggtgctgtgg
aaaggcccatggagcgcaaactcgacagagtggtcgaccatttccatcgcagataaggac
aacctgattaaacagactgtacaggagagcgagttctggatgtcattcgctgatttcacg
aggaacttcaccaagctggagatgtgtaacttgacccccgacgccctgggctgcgatgaa
agacaaagctggacggtgtcggtcaacgagggtcggtgggtgagaggcagctccgccggc
ggctgcaggaacttcccacaaaccttctggacgaaccctcagtaccggctgcaactgtac
gaggacgacgacgacccggaggacgggcaggcggcctgtaccgttgtcgtggctctgatg
cagaaaggccggaggatgcagcgccaccaaggggctaaattcctcaccatcgggttttca
atctacgaggtgccgaaggagatgtgcggacaaaatcaacacctgcagaaggacttcttc
ctgtacaccgcctccaaagccaaatgcaagacctacattaacctgcgggaggtgacggag
cgtgtgcacctgcctcagggagagtacgccatcatccccaccacctttgagccccaccaa
gacggagagttcatcctcagggtgttctcggagaagaagagcacgtctgaggaagtggag
gacacaattgggtctgagaaaacacagcaagacaggaaaaagaaagagaagccgatcgtg
ttcgtgtcagacagagcacgagccaacaaagaaattgagcacgacggcatcgagggggag
aagaagacgaagaagaagccaaagcgaaagctactccaaccggaggaggagaccgaagag
gaaaaacatttcagagccatttaccaaaaggttgccggcgaggacatgcagatctgcgcc
aacgagctcagaacgatcatgagaaacgtgctcgccaaacataacgaaatgaagacggaa
ggcttcagcctggagacgtgtcgcagtatgatcgcgttgatggatactgatgggacggga
aagctgaacctgcaggagttcaaacacttgtggaaaaagatcaaggagtggcagctgatc
ttcagacgatacgacgaaaacaagaccggctgcgtcagcagcttcgagatgaggaacgcc
gtcaatgacgcagggtttcacctcaacaagcagctgtacgacatcatcgccatgcgctac
gcagacgaacatctcaacatcgactttgacagttatatctgctgctttgtgagactggag
ggcatgttcagagcttttaatgccttcgacaaagatggagatggaataataaagctcaat
gtcctggagtggcttcagctgacggtgtattcttaa
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