Gasterosteus aculeatus (three-spined stickleback): 120808350
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Entry
120808350 CDS
T07457
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120808350 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120808350 (rev3l)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120808350 (rev3l)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
120808350 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
120808350
NCBI-ProteinID:
XP_040017163
LinkDB
All DBs
Position
XVIII:4553585..4608448
Genome browser
AA seq
3032 aa
AA seq
DB search
MFAVRIVTADYYLASPIKDLDVCYSEFRESGVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGHSQQPERYLRQVAFSIDRALNAAMGNPSSSAQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLVNLGAV
KFRRGPSKGDAAAVPDRLTPSGVPSISPWKSPCTSKVNDSTLGDTFVRWEENAIPCSLVL
DEVKQSTCELEVDAVAADVLNRLEIENQIGRNPGLQAIWEDEKQRRREKDQVSQIETPKS
QDREFVASTESEKIFMKRFKEILKENEFDVTQGLSVSNRQDQEDLLSEMTLHPDPLTPEG
WPFTPANAVEAHRSPQPVPDSVRTSKKVREEAVVDEEAILSLLENSQTFLPPSQTSNHSP
LLDSSQDQAFIDLLAGLENDGFRRTPVRQNSQSLPGARSHHCNSDEEEEEPELDKVEAEL
SVIMSQRWDNEAPENSPSPRPGAKEPDNNGFSDERQESSDEDMEWSGGSNSLFANLSIPQ
LDGAADESSDSSLTDSGSRTQSSVIVSEKRLGKRNPFSGETVHLEPPSSAKIFLEHRPVH
GLDTEQPLDKHFQSKSSQDSSSECATGFKFDNEIPYIPPVKPPIPCKLSSHPEVSPTCIE
KMNIHPLYTTCTYDKKKSIALDKTDLKTFPFGNRKITKNGKKYGSIKNVETNCLSILQNH
RTFSLCYSELRNCSAKAELDLSQKDTKSPLLRNISSAPSPIVDDGFLNPQEEEMGQDSEE
GDVGELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLSRKKAVIKKPADPCSKIE
QALPRRSRLKVYKKGLGMAGQRNKISIFESCTSDSQDSAALTSTMPACQDTVDAEMPVLE
NKLIIEPIEDVPITEQEPITKNQPQSEDSSVSEQLEQTEPPSEPPITTVFSFSSEAKDST
EETLRSLQDLSAKVTCTKSLALPGSKYTLRAKRKMIHDGEDGEYSGATRSKNPASIKERF
KDTNVPSGQEAKYQKRCKKEPPIIIKYIIINRFKGQKNMLVKMSKVNAEEQLVMLTSDKL
DQYNRLAPLKDFWPKVQESSAVKFPIVETKAKKHPKRKAKVTSTNKKTFCNSSKPHVRQG
QRVKRTKGSQKGPILQSLTPPGPSYGELADDHDREYSDVMVELGYLSDSSTSPTNSTPPR
CWSPSEPLTDTSSSEQLINPLSDPCPSSDFHKTLCSTKGAQRKCQTAKPKISPHTQRNTS
KSIAKPQAEEEPKKDKSRPRSGGAPKQRKKAKDTAESTLKNSTNTTRPRKSCKKKTEEHK
IHDSSQDTSQLLFIEDEPPPSTSSSQDGPPFQQPMSTGGKSQGSSQPVSNSDSNSVAQSL
EPKVEDCETSIMEVNQSLSVQLKQQGCQTTVVKLEASQEKCTAPLPPLATRPLLEDSKDP
KASPHSGPKNGQIPTLSETPSGLAVLKQLLQKRQQGQALPLQVVGTNSPSTAIAQATALL
DPTSKPVTFKRTPSASPRKPRVPKSTTPKVKKPRIRKGKARSSQPNLSVKQEGNMSDDYP
IFLSDPGLDSCNYVEDSLSPQLPHNYNFDINAIDQTEFSSPYSGSQFVLTDKNLPLKFLS
DVSLEAVSAQSLGFEKKLDRLFDSGEELQRGFDWRKARSVSPDLFDRPEYGESLSNHLTF
LDSEKTKSKEWDFSLGKAHTLSHFQDFHCERKELLFSVFDSVLPLPLSSASFVDHDGSPT
GELLECNDGLTSTTPSSSPRSISSLSQVRAGQLLRGAGGGTHVLKPLMSPPSREEILVTL
LDLEMSEATFQEPFCSNPSDAPGKPMEVGGRKLAVHTRLTKELAEFSGDLSLEGLYFWKT
AFSAMTHPAITFTSSPQARGARTSEGSIDHAKLDPSSASDKKVILMPCKNSPSRERVQLW
LEARKQYESLQKGLLKKGVVGLDVVGMAERTEQPGASSCPAVTVEMCERLSSIRTQRRKK
SNLSLIMTPMTNTGSQCKSTSVSPVSDDGGVNIEQEGKESDDRENKTPSPESPELPSWQQ
SCQPSSSGLDRLCEKHPELMSPGLSNSSERRGESPSPSSIHRSNREEGRTSPHFFHSTPF
LRRRRRSQEHLEPVCSTPVSEEDPVSQRLQQRRRSQADPLRRVLLTTQMKNHFAALNVPK
KDNSEIEGPSIANSYGFKISMQNLQDAKALHEVQHLTLIGMELHARTRRDLEPDPEFDPI
CALFYCLSSDAPLPDVHSTQLTGAIVVDKDHQSRDQAGHRGTAPLLVRSGVSGLQVTYAT
DEKVLFQELIAVMRRFDPDILVGYEVQMHSWGYLLQRAAALGVDLCQQLSRVPGDSKDNR
FSAERDEYGADTMSEINIIGRITLNLWRTMKTEATLNNYTFENVAFHVLHQRFPLYSPRT
LSDWFDHNTDLYRWKMVDHYVSRVCGSMQLLQQRDIIGRTSELARLFGIQFYHVLTRGSQ
YRVESMMLRLAKPLNYIPLTPSIQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYP
SIVIAYNYCYSTCLGHVESLGTHDEFKFGCASLRVPPELLYQLRNDITVSPNGIVFVKSS
VRKGVLPNMLEEILSTRIMVKQSMKAYKQDRTLTKLLHARQLGLKLIANVTFGYTAANYS
GRMPSVEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKI
GNEIAEAVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYESLDQKEPVFDAKGIETVRR
DGCPAVSKILERSIKLLFETRDISQVKQFVQHQCMKVLDGRASMQDLTFAKEYRGSSSYR
PGACVPALELTRRMMAYDRRLEPRVSERVPYVIVYGIPGVPLIQLVRRPMEVLHDPALRL
NATYYITKQILPPLARMFQLIGVDIFAWYQELPRSQKASCSLSVGGEEVGRKGTISQYFT
TLHCPACDELTQLGVCSRCRAAPQRVAVTLHQDMRLWESQQDQLLKICRNCSGCAERQVP
CVSLECPVLYKLSRVNRQLSKAPYLRQLLEQF
NT seq
9099 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgtgcgtatcgtcaccgcagactactatctagcgagtccgattaaagacctg
gatgtctgctactctgaattcagggagagcggcgtgaagaaagtgccggtggtccgtata
tttggagcaacacctgcaggccagaaaacgtgtctccacctccatggcgtgttcccctac
atctacgtaccatacgatggtcacagccagcagccggagcgctatctgcggcaggtggcc
ttcagcatcgacagggccctcaacgctgccatgggaaacccctcctctagtgcccagcac
gttttcaaggtggttctggtctctggcatgcctttctacggctaccatgctaaggagaag
cactttatgaagatctatctgtacaatcctcagatggtcaaaagggtgtgcgagctgttg
caaagtggagcagtgatgaacaagagctaccagcctcacgaaggccacatcccttacctg
ctgcagctcttcattgactacaatctgtacggcatgaacctggttaatttgggagccgta
aagttccgcaggggcccgagcaaaggagatgcagcggccgtcccagacaggctgactccc
agcggtgttcccagcatcagcccctggaagagcccctgcacctccaaggtcaacgacagc
accctgggggacacgtttgtccgctgggaggagaacgccataccctgctctctagtcctg
gatgaggtgaagcagagcacctgtgagctggaggtcgatgcagtggccgcagacgtcctc
aaccgcctggaaatcgaaaatcaaatcggcaggaacccggggctgcaggccatctgggag
gacgagaagcagaggaggcgggagaaggaccaggtctcccagatagaaacccccaagtcc
caagaccgtgagttcgtcgcttcgactgagagcgagaagattttcatgaagagattcaag
gagatcctgaaggagaacgagtttgacgtcacacaaggtttgtctgttagcaacaggcag
gaccaagaggatctcctcagtgaaatgaccctccatcccgacccactgacgcccgaggga
tggccgtttacccccgctaatgctgtggaggcgcacaggtcaccgcagcctgtcccagac
tctgtgaggaccagtaagaaagtccgagaggaggctgttgtggatgaggaggccatcttg
agtctcctggagaacagtcagaccttcctcccgccttcccagacctccaaccactcgccc
ctgttagacagcagccaggaccaagccttcatcgatctgctggcagggctggagaacgat
ggcttccgcaggactcccgttaggcagaattcccagtcacttcctggtgccaggagccac
cactgcaacagcgacgaggaggaggaggagccggagctggacaaggtagaggccgagctc
agcgtgataatgtcacagcggtgggacaacgaggctcccgagaactcaccctcaccaagg
ccaggtgcaaaagagccagacaacaatggcttcagcgacgagcggcaggagtcctccgac
gaagacatggagtggagcggcgggagtaactctctgtttgccaatctgtccatcccccag
ctcgacggggcggcggacgagagcagcgattcatccctaaccgacagtggctccaggacc
caatcttctgtcatagtctcagaaaagaggctcggaaagaggaatcccttctccggggag
actgttcacctggagccgccgtcttcagcgaagatctttcttgagcacagaccagttcat
gggctggacacggagcaaccacttgacaagcactttcagtcaaagagcagccaggacagc
agcagtgaatgtgcaacggggttcaaattcgataacgaaatcccctatatcccgccggtc
aaaccccccatcccctgcaagttatccagtcaccctgaggtgtctcccacctgcatagag
aaaatgaacatacaccccctgtatacaacctgtacatatgacaagaaaaagtccatagct
ttggataagaccgacctcaagacgttcccatttggtaacagaaagatcaccaaaaacggg
aagaagtatggcagcataaagaatgtagaaactaactgtctgtccattcttcagaaccat
aggaccttctccctctgttactcagagctgagaaactgctctgctaaggcagagctggac
cttagccagaaggacactaaaagccctctcctgaggaacatctcctcagctccttcaccc
attgtggatgatggatttcttaatcctcaggaggaagaaatgggccaggacagtgaagag
ggagacgttggtgaactcaaaatcaggtacgaggactatcaggaaaataagactgagagg
acgattgtggcccagcaggaagcacactacaagttcttcccaagtgtaatcctctccaac
tgcctcagtaggaagaaagctgttatcaaaaagccggcagatccttgcagcaagattgag
caggccctgcctcgcaggtcaaggctaaaagtgtataaaaaagggttgggaatggcaggc
caaaggaataaaataagcatttttgaaagctgtacttccgacagccaggatagcgctgcc
ctcacctcaaccatgcctgcttgtcaagatactgtagatgcagagatgccagttttggag
aataagttgataatagagccaattgaagatgtgccaatcacggaacaggagccaatcaca
aagaaccagccacaaagtgaggacagctctgtaagtgaacagctagaacagacagaacca
ccttcagagccccccatcacaaccgttttctctttttcctcagaagctaaagactcgaca
gaggaaactttaaggtcattacaggatttatcagctaaggtcacctgtactaaatctttg
gcgctgcctggtagtaaatataccctgagggccaaacggaagatgatccatgatggcgag
gatggagaatactcaggtgccactcgttctaaaaatccagcctccatcaaagaacggttt
aaggacaccaatgttcccagtgggcaggaagcaaaataccagaaacggtgcaagaaggag
cccccaatcattatcaagtacattatcatcaacaggtttaaaggacagaaaaacatgctg
gtgaagatgtccaaagtgaatgcagaggagcagttggtgatgctgacgtcagacaagcta
gaccagtacaatagacttgcccctcttaaggatttctggcccaaggtacaagaatcctct
gctgtcaagttccccattgttgagacaaaggcaaaaaaacacccaaaaagaaaagcaaag
gtcacctccacaaataaaaaaacgttctgcaactcctccaaaccacatgtcagacagggt
caaagggtcaaaaggactaaaggctctcagaaaggtccaattctacaatctcttacaccc
cctgggccatcttacggcgagctagcagacgaccacgaccgtgagtattctgatgtcatg
gtagaattgggctacctttcagatagctccacaagtcctacaaactcaacgccccctcgt
tgttggtccccaagtgagcctctcacagacactagcagttcagaacagctaataaaccca
ctcagtgacccatgtcctagttctgattttcacaagacattgtgttcaaccaaaggagca
caaagaaaatgtcaaactgccaaaccgaaaatatccccacacacacaaaggaatacaagc
aagtctatcgctaagcctcaggcggaagaggaacccaaaaaagataaatcacgaccaagg
agtggtggtgctccgaagcaaaggaagaaagctaaagacacagcagaaagtaccttaaag
aattctacaaacaccacgagaccgcggaagtcttgcaaaaagaagacagaggaacacaaa
atccatgattcaagtcaagacacctcccagcttctattcattgaggatgagccacctcct
tccacgagttcctctcaagacggccccccatttcagcagccaatgagcaccggtggcaaa
agccagggtagttcccagccagtatctaattcagactcaaactcagtagcccagtctcta
gaaccaaaggtcgaggactgtgagacttccatcatggaagtcaaccaaagcttatcagtt
cagctgaagcagcagggttgccagaccactgtggtaaagttagaggcttcacaggagaag
tgcactgcccctctacctcctctagctactagaccactacttgaagatagtaaagacccc
aaagcctccccacactcaggcccgaagaacgggcagatcccaactctctccgagactcca
tctggcttggctgtcctcaagcagcttctccaaaagaggcagcagggacaggctcttcct
ctacaggtggttggtacaaacagcccctcaactgccatagctcaggccacagcactgcta
gatcccacatctaaaccagtcacattcaaaagaactccctccgcctctccacggaaaccc
agggtcccaaaatctaccactccaaaggttaaaaagcccagaatcaggaaaggcaaggca
aggagctctcagccaaacctatccgtgaagcaggagggcaacatgtctgatgactacccc
atcttcctgtcagaccctggcctggacagctgcaactacgtggaagatagcttgtcacca
cagctcccacacaactataactttgacataaatgccattgatcaaacagagttctctagc
ccgtacagcggcagtcagtttgtgctaactgataagaatttaccacttaagttcttgagt
gatgtcagtctggaagctgtatctgctcagtctctgggctttgagaagaaacttgatagg
ctctttgattctggggaggagctccaaagaggctttgattggcgcaaagcaaggtccgtc
agccccgacctctttgatagaccagagtatggggagtcgctttcaaatcatctcactttc
ctcgactcagagaaaaccaagagcaaagagtgggacttctctttagggaaagcccacacc
ctcagccattttcaagatttccattgtgagagaaaagagttgctcttttccgtcttcgac
tctgtcctgccgctacccttaagctctgcgtcattcgtcgaccacgatggctccccaaca
ggggagcttctggagtgtaatgatgggctaacgtcgaccacacccagtagctctccccgc
tccatcagctcactctctcaggtgagggctggccagctgctgcgtggggcaggaggtgga
acccatgtcctgaagccactcatgtcaccgccaagtcgggaggagattcttgtcactttg
ctggatctggaaatgtcggaggccacgttccaggagcctttctgcagcaacccctctgat
gcgccagggaaaccaatggaagttggcggccgtaagttagcggtgcataccaggctgact
aaggagctagcagagttcagtggagatctgtctttggagggcctctatttctggaagact
gcgttctcagccatgactcaccctgccatcacttttacctcatctccccaagcccgggga
gctcggacctcagaggggagtatagaccacgccaagcttgacccatcctcagccagtgac
aagaaggtcatcctcatgccctgcaaaaactcacctagcagggagcgtgtgcagctgtgg
ctggaagccaggaagcagtacgagagtttacaaaaaggattgctgaagaagggggtggtt
gggctagatgtggtggggatggcagaaagaactgagcagccaggtgcgtccagctgtcca
gcagtgacggttgagatgtgtgagagactctccagtatcaggacacagaggagaaagaaa
agcaacctgtccttaatcatgactcccatgacaaacacaggctctcagtgtaaatccacc
tcagtgagtccagtttctgatgatggcggtgtgaatattgagcaggagggcaaagagagc
gatgatcgtgagaataaaaccccctctccggagtccccagagctgccttcctggcagcag
tcctgtcagcccagttcctcagggctggaccgcctctgcgaaaaacatccagaactaatg
tcacccgggctctccaactcctcagagagaagaggggagagccccagtccttcatccatc
catcggagtaacagggaagagggaaggacaagcccccacttcttccacagcacccccttt
ttaaggcgaaggcggagaagccaggagcacttggagccagtgtgcagcacgcccgtatct
gaggaggatcccgtttctcagagacttcagcaaaggaggagaagccaagcggacccactc
agacgagtgttgctgaccacacagatgaagaaccactttgctgctttgaatgtgccaaag
aaagataactctgagattgaaggccccagcatagccaactcttacggtttcaaaatcagc
atgcaaaatctgcaggatgccaaagctctgcatgaggtccagcacctaacactgataggc
atggagctccatgctagaacccgccgggaccttgagcctgacccagagttcgaccccata
tgtgccttattctactgcctcagttctgatgctcccctgccagatgttcacagcacccag
ctgacgggcgccattgtggtggacaaagaccatcaaagcagagaccaagcaggtcataga
ggaacggcgcccctgctggtcaggtcaggcgtctccgggctgcaggtgacgtacgccacc
gatgagaaggtgctgtttcaggagctgatcgccgtcatgaggaggtttgacccggatatc
ctggttgggtacgaggtgcagatgcactcctggggctacctcctgcagcgggctgcagcg
ctcggagtggacctgtgtcagcagctgtcccgtgtgccaggtgactccaaagacaaccgc
ttctccgcagagagagacgagtacggagcagacaccatgagtgagatcaacatcattggg
cgcatcaccctcaacctgtggaggacaatgaagactgaggcaacattgaacaactacact
tttgagaatgtggccttccatgtgctccaccagcgcttccccctctacagcccccgcacc
ctgtccgactggtttgaccacaacaccgacctctacaggtggaagatggtggaccactac
gtgagccgtgtgtgcggctccatgcagcttcttcagcagcgcgacatcatcggcagaact
agcgagctggcgcgattgtttgggattcagttctatcacgttctgacccggggatcacag
taccgcgttgagtcaatgatgcttcgcctggccaagccgttgaactacatccccttgacg
cctagcatccagcaacgagcccaacagagggcgccgcagtgcattccactggtgatggag
cccgaatcgcgcttctacagtaactcagtgatcgtgttggacttccagtcactctaccca
tccatcgtcattgcgtacaactactgctactccacctgtctgggccacgtggagagcctg
ggaacgcacgatgagtttaagttcggctgcgcctccctgcgggttcctcctgagctcctc
taccagcttcgcaatgacatcaccgtctcacccaacggcatcgttttcgttaagtcgtcg
gtgcgcaaaggcgtcctgccaaacatgctggaggaaatcctgtccaccagaatcatggtg
aagcagtcgatgaaggcgtacaagcaggacaggacgctgaccaagctgctgcacgcccgg
cagctcggactcaagctcatcgccaacgtcacctttggctacactgccgccaactactcc
ggccgtatgcccagcgtagaggttggagacagcattgtccacaaagccagagagacgctg
gagagagccatcaagctggtgaacgacactaagaagtggggggcacgcgttgtgtacggg
gacaccgacagcatgtttgtgttgctgaagggagccaccaaagagcaggccttcaagatc
ggcaacgagatcgcagaggccgtgaccgcaaccaacccgaagccgatcaagctcaagttt
gagaaggtgtacctgccctgcgtgttgcagacaaagaagcgctatgtgggctacatgtac
gagagccttgaccaaaaggagcccgtgtttgacgccaaagggatcgagacagtgcggcgc
gacggctgccccgctgtttccaagattctggagcgttccatcaagctgctgtttgagact
cgtgacatcagccaagtgaagcagtttgtgcagcatcaatgcatgaaggttctggacggc
cgggccagcatgcaggatctgaccttcgccaaggagtaccggggcagcagctcgtaccgg
cccggagcctgcgtgccggccctggagctcaccaggcgcatgatggcgtacgaccgtcgc
ctggagccccgcgtgagtgagcgggtgccttatgtgatcgtgtacgggattcccggtgtg
ccgctcatccagctggtgcgtcggccaatggaggtgctgcacgaccctgccctccgcctc
aacgccacctactacatcaccaagcagatcctgccaccgctggcccgcatgttccaactg
attggggtggacatttttgcctggtaccaggagctccccaggagtcagaaggcgtcctgc
tccttgagcgtgggtggagaggaggtcgggaggaaaggaaccatctcccagtacttcacc
accctccactgccctgcctgtgacgagctcacccagctgggcgtgtgctcgcggtgccgc
gccgcgccccagagagtcgcagtgacgctccaccaggacatgagactgtgggagtcacag
caggaccagctgctgaagatctgcaggaactgtagcggctgtgcagagcgccaagtgccc
tgtgtgtctctggaatgtcctgtcctctacaagctgtcccgggtcaacagacagctctcc
aaggccccctacctcagacagctgctggagcagttctga
DBGET
integrated database retrieval system
