Gasterosteus aculeatus (three-spined stickleback): 120808437
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Entry
120808437 CDS
T07457
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120808437 (prdm1c)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120808437 (prdm1c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_4
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_jaz
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120808437
NCBI-ProteinID:
XP_040017287
UniProt:
A0AAQ4PII1
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Position
XVIII:complement(8991205..8999638)
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AA seq
775 aa
AA seq
DB search
MCGSSQGFTAPSQCTKAMLTSESSLHSTGSLQHAMPETQDADMTSWSETTFEKRCTYIVK
DQLLEELPENNCKTRAERSLPRNLALKRCPGSAEVLGVNSKELIPKGTRFGPLVGESYTN
ETILKDKDRKYFWRVFSEGFLHHILDGLNEERSNWMRYVNPACSEEGQNLIACQSGLEIY
FYTIKPLQPGQELLVWYCREFALRCNYPPLDQLAIDNIDSRALGKTTGKRGHSVSEILRD
EPSKSRPRRLDRPFSQTNVPAVFPLCPRVVYPNQPQSDSIHGHRYASLPPLLSGSPPDSR
ADTRSVLRGPVPSSLHFPIQPSQCPVVAKPYQEPSAHDRGPPALRPSPYLLPHYSLGLNS
NLPHSYPCYGDGLKPDLTLSSHLLPFDGYSHFLHPLPNRHKDMTIALSNTKQDLILSPIK
EHRDNKELLSERTNYLRFHSDDLRDFKHCAHSHVQADLTIPATSSASSVVPSMRKALPSS
SPLDAFRDCLPSKPPSATESNTEDAMDLRKIKRGGHIVGYKNLSYPLSRQNGKIRYECNV
CEKVFGQLSNLKVHLRVHSGERPFKCQTCSKNFTQLAHLQKHYLVHTGEKPHECKVCLKR
FSSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHTGERPHRCPCCPCAYLHH
CSLRVHLQGFCPLSPSASRRHSPEELQQVNAEIERFDMSEAAEQLEFMAADAEMEKGDVT
DLIKKMETHTSDHHGGQQGKTELSSDKSAKEFAADLPLPLHSTRIKLESGCISEP
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagccccgtcccagtgcaccaaagccatgttgacc
tcagaaagttcactgcacagcacagggtcactgcagcatgcgatgcccgagacacaggat
gcagacatgacatcatggagcgagacaacatttgagaagaggtgcacttacatcgtgaag
gaccaacttctggaggaactgcccgaaaacaattgcaagacacgcgctgagagatcctta
cccagaaacctggccctgaaacgctgccccggctctgcagaggtgctcggggtgaacagc
aaagagctgattcctaagggaacacgttttggccctctggtgggggaaagctacactaac
gaaacaattctgaaagataaagacaggaagtacttctggagggtcttctctgaggggttt
ttgcaccacatcctggatggtttgaacgaggagaggagcaactggatgcgttacgtcaac
cctgcctgttctgaagaggggcaaaacctgatcgcctgccagagcggtttggaaatctac
ttctacacaatcaaaccacttcagccgggccaggagcttctggtgtggtactgccgcgaa
tttgccctgcgctgcaactaccctcctctggaccaactggccattgacaacattgacagt
cgagcactggggaagacaacagggaaacggggacacagcgtctctgaaatcctcagagac
gaaccttccaaatcccgccccagacgtctggatagacccttctctcagaccaacgtccca
gcagtttttcccctgtgtccccgtgttgtgtacccgaaccagccccagtcagattccatc
catggccatagatatgcaagtttaccacctctgctatccggcagccctcccgatagcaga
gctgacacaagatcagttctaagaggtcctgttccctccagtttgcacttccccatacag
cccagtcaatgccccgttgtagccaaaccgtaccaagagccttctgcgcatgatcgaggc
cctcctgctctgaggccttcaccctatctgctgcctcactactccctcggcctcaacagc
aatctacctcactcatacccgtgctacggagacggactgaaacctgacttaacactctca
tctcatttgctgccttttgacgggtactcacacttccttcatcctctgcccaacagacac
aaagacatgacaattgcactatccaacaccaaacaagacctcattctttcaccaatcaag
gagcacagagacaataaggaacttctatcagaaaggacaaactacctcaggttccattca
gatgaccttagagatttcaaacactgtgcacacagccatgtccaggcagacctgacaata
ccggccacatccagtgcctcatccgtggtcccctcaatgcgcaaagcactgccttctagt
tcgcctctggatgcctttagagactgccttccctccaaaccaccctctgccactgagagc
aacactgaggatgcaatggacctcaggaagatcaaacgaggtgggcacattgtgggctac
aagaacttgtcttacccactcagcagacagaatggaaagatccggtatgagtgcaacgtc
tgtgaaaaggtctttgggcagctgtccaacctcaaggtccatctgagagtgcacagtgga
gagcgtcccttcaagtgtcagacctgcagtaagaactttactcagttggcccacctgcag
aaacattacctggttcacactggagagaagccccacgagtgcaaggtgtgcctaaagcga
ttcagtagcaccagtaacttaaagacacaccagcggctacactcaggtgagaggccttac
cagtgcaagctgtgccccgcccgcttcacgcaattcgtccacctcaagctccacaaacgc
ctccacacaggagaacgacctcacaggtgtccctgctgcccttgtgcctatctccaccac
tgcagcctccgggtgcacctccaaggcttctgtcctctctccccctcggcctcccgcaga
cactcgccggaggagctacagcaggtcaacgctgagattgagaggtttgacatgagcgag
gcggcggagcagctcgagttcatggccgcagacgccgagatggaaaagggggacgtgacc
gacttaataaagaagatggagactcatacctccgaccaccacggtggccaacaagggaag
acggagctgagcagcgacaaatcagcaaaggagtttgctgccgatctgcctttacctctg
cattcaacccgcatcaagctggagtcaggctgcatatcagagccctaa
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