Gasterosteus aculeatus (three-spined stickleback): 120808446
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Entry
120808446 CDS
T07457
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120808446
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120808446
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
120808446
NCBI-ProteinID:
XP_040017322
UniProt:
G3P279
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Position
18:complement(8412801..8422327)
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AA seq
893 aa
AA seq
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MGVHDLWSVVEPVRESVPLYSLSGMTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRA
SSLTLMGVKLVFVMEGQAPKLKADTMSKRTETRYGGFKKASAPKAAATTSRGRFNAVLRE
CADMLDYLGLPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGAQTVYRNFNMNSKD
PQVDCYRTSRVQTELHLSRENLVGLAILLGCDYIPKGVLGVGKEQALRLIRMLNGQTLLQ
RFTRWKEENAGVLEGVKKVPHCNICRHPGSTKAHERGGCVLCDSKHFCQPQDFDYQCPCD
WHRHEEARQHLSFEANIRKKTLENQQFPFTEIICEFLIAKDKPVSHFKRRAPNLLSMQKF
AYDKMEWPKHYTSEKVLVLITYAELINRKYGREMSSQIKPLRIFKPRVRSGVACFEIIWS
APEHYVFPEDRPAEDELEVRTVEEESLFRVAYPEVVDSYLRDKALAEENKTKKKRPKNKK
EKPSDVSDGISDLLAQMTLQSSSNTDTRTVICVASNTDEPEVVLLDTPVDRKQRLESIEA
LSSLGDRPRTPRSHAESDAAASPSVSAVIDALHLSDIDWDALSFTSSPAQSTTSTVPQMR
EATDGDVGETEDENPKRRSSGGTQEAVSGAAAGLSYADCPLRDRLLMRNTAVNQMDSHED
VNFELAPLKHISSHNSKPKIQIPSRGKESAVAKKEPLSVRRQRATSEAGTNAHSSKQQLG
PAAQVKTKDDGDGSRKPPEKYKFVRKAISSSAPQRSHSDPAQSAKVSASQTTKKSVCMSA
CSSSEESDAENLQSGPQRKTQTRPVSKIRGGFPLDFPLRPKKAPQPRSQGADTEKSGTLV
STPSRCQDAPPADGDVFLRKTASPVAALDSDDSVVCSESPLPLAERLRLKFLK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccacgatttgtggtccgtcgtcgagccggttcgcgagtcggtgccgctgtac
agtttgagcggaatgacgctggcggttgacctgagtctatgggtttgcgaggcccagcac
gtccaagcaatgatggggagagttaccaagccccacctgaggaatttatttttcagagcg
tcctccctcaccctcatgggagtaaagctcgtctttgtgatggaaggacaagcccctaaa
cttaaagcggacaccatgagcaagaggacagaaacaagatacggaggattcaaaaaggct
tctgcgccgaaggccgcggcgaccaccagcagagggcgctttaacgctgtgcttcgggag
tgtgcagacatgttggactatctgggtttgccctgggtgacagctgctggggaggctgag
gccatgtgtgcatacctggactcacaaggcctggtggacggctgcatcaccaacgatgga
gatgccttcttgtacggagcccagactgtgtacaggaacttcaatatgaacagtaaagac
ccacaggtggactgttacaggacgtcgagagtccaaacagagttgcatctctccagagag
aatctagttggtctggccatcctcctcggctgtgattatattcctaaaggcgttctgggc
gttggtaaagaacaagcgctgaggctcatccggatgctgaatggacaaacacttctgcag
aggtttacgcggtggaaggaggagaatgcaggtgtgttggagggagtcaagaaggttcct
cactgcaacatatgtcgacatcccggctcaacaaaggcacacgaacgcggaggctgtgtg
ctctgcgacagtaagcacttctgtcagcctcaggactttgactaccagtgtccctgtgac
tggcaccgccatgaagaagcccggcagcacttgtcttttgaggcaaatatcagaaagaaa
acactggaaaatcaacaattccctttcacagagatcatttgtgagtttctgattgcaaag
gataagcctgtgtcacattttaagaggagagcgccaaacttgctgtcgatgcagaaattt
gcctatgacaagatggagtggccgaagcactacaccagcgagaaggttttagtcctgata
acctacgcagagttgattaacagaaaatacggaagagaaatgtcttctcaaatcaagccc
ctcagaatattcaaacccagggtgaggagtggggtcgcttgcttcgagatcatctggagt
gcaccagaacattacgtgtttcctgaggatcgacctgcggaggatgagcttgaagtgagg
acggtggaggaagagtctctcttccgtgtggcctatccggaggtggtggacagctatctg
agagacaaagctctggccgaagagaacaagaccaagaagaaaaggccaaagaataaaaag
gagaagccatctgatgtctccgatggtatttcagacctcttggcccagatgacccttcag
agttcctctaacacagacacacggacggtaatctgtgtcgcctcaaacaccgatgaacca
gaagtggtgcttttggacactccggtggaccgtaaacagcgtctggagtcgatagaggcc
ctcagcagtctgggcgatcggccccgtacccctcggtctcacgcggaatcagacgccgct
gcatcaccgtcggtctccgccgttatcgacgcgctgcacctcagcgatattgactgggat
gctttgtccttcacgtcctctccggctcaatcgaccacaagcactgtgccccaaatgagg
gaagccacggacggggacgtcggggagacggaggacgaaaacccaaagcggagaagctcg
ggtggtacccaagaagccgtctccggagctgctgcggggctgagctacgcggactgtcct
ttgagggacaggctgctcatgaggaacaccgctgtgaaccagatggactcgcacgaggac
gtgaactttgagctggctcccctcaaacacatttcttcccataactcaaaaccaaaaatc
cagatccccagtagaggaaaggaatctgccgtcgcgaaaaaagagccgctctcggtcaga
aggcagcgtgcaacaagtgaagcagggacaaacgctcacagctcaaagcagcagctgggg
cccgcggctcaagtgaagacaaaggacgatggcgatggctccagaaagcctcctgagaaa
tacaaattcgtccgaaaagccatttcatcatctgcgccgcagaggagccactccgacccg
gctcaaagtgccaaggtgtccgcgtcgcagaccaccaagaagagcgtgtgcatgagcgcg
tgctcatcgagcgaggaaagcgacgcagagaacctgcagtctgggccgcaaagaaaaacg
caaacaaggcccgtgagcaagatcaggggcggcttccccttggacttccccctcagacct
aaaaaagccccgcaaccccggagccagggtgcagatacggagaagagcggcacacttgta
tcaactccgagcagatgccaggacgccccgccagctgacggggatgttttcctccggaaa
acagcatcacccgtcgccgcgttggacagtgatgactcggttgtttgcagcgagagtccg
ctgccgctggcagagagactgaggttgaagttcctgaagtga
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