Gasterosteus aculeatus (three-spined stickleback): 120808656
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Entry
120808656 CDS
T07457
Name
(RefSeq) CD44 antigen-like isoform X1
KO
K06256
CD44 antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120808656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120808656
04090 CD molecules [BR:
gat04090
]
120808656
00535 Proteoglycans [BR:
gat00535
]
120808656
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120808656
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120808656
Exosomal proteins of other body fluids (saliva and urine)
120808656
Exosomal proteins of colorectal cancer cells
120808656
Exosomal proteins of bladder cancer cells
120808656
CD molecules [BR:
gat04090
]
Proteins
120808656
Proteoglycans [BR:
gat00535
]
Cell surface proteoglycans
Others
120808656
Glycosaminoglycan binding proteins [BR:
gat00536
]
Hyaluronan
Cell surface receptors
120808656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
PRIMA1
PDZ_1
DUF3439
DUF3149
DUF7045
Motif
Other DBs
NCBI-GeneID:
120808656
NCBI-ProteinID:
XP_040017622
LinkDB
All DBs
Position
XIX:10308857..10320025
Genome browser
AA seq
367 aa
AA seq
DB search
MWTLVLGVTFGLLASYGSEDIPVTSRSCSYGGVFLVQGATRHSLNFEAARNVCVQLESVL
ASEAQVKKAYDKKMETCRNGWTNNMTIAILRHSHHANCAQNATGFFIQQQQQQDLYDAYC
FDEHAGPEKNCTKEFVLKPAEPSSQPEDPTITGSQEEITSATEPVDVYEKYTVSQNTETP
ATSETPAVKENPSGGSDNSSNGSTLTTWDDQTAGSGAMATTSEEAPPPTETQTPTDNDQT
KETVTIVPQQPPKGEGRVLAPSGVPDQQEGSSANWLVIIAVIAAVAVILLVCAVIAMRKS
KTQTLNITSKNGGEGNGAAASASGSHAQEREQEMVTLMNKEKIQENGATEEFTVITLEES
PEKEQLA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcttgtcttgggggtcacctttggattattggcctcctacgggtcggaagat
attccagtgacttcccgcagctgcagctatggcggggtgtttctggtccagggagcgacc
cgccactctctgaactttgaggcggctcgaaatgtgtgcgtccagctggagagcgtcctg
gcgagtgaagcacaagtcaagaaggcctatgataagaagatggaaacatgcagaaacggc
tggaccaacaatatgaccattgccatactcagacactcacaccatgcaaactgtgcacag
aacgcgacgggcttctttattcaacaacaacaacaacaagacctgtatgatgcatactgc
ttcgatgaacatgctgggcctgagaagaactgtacgaaagaattcgtactaaaaccagct
gagccctcatcacagccagaggacccaacaataacaggaagccaggaagaaatcacctca
gcaaccgaaccagtggatgtgtatgaaaagtacacagtcagtcaaaacacagagaccccg
gccacctcggagaccccggcagtgaaagaaaacccctctggagggagtgacaacagcagt
aacgggtccacactcactacgtgggacgaccagaccgctggctccggggcgatggctacc
acctcggaggaagcccccccgccgactgaaacacaaactcctactgacaacgatcaaacg
aaagaaaccgtaacaatagttccacaacagccacctaaaggcgaaggacgtgtcctggct
ccgagtggtgtaccggatcaacaggaaggcagttcagcgaactggctcgttatcattgca
gtgattgcggccgtcgccgttattcttctcgtgtgcgcagtcattgccatgagaaagagc
aaaacgcagaccctgaacatcacatccaaaaacggtggcgagggaaatggggccgcggca
tccgcctccggctcccacgcccaggagagagagcaggaaatggtgaccctcatgaacaag
gagaagatccaggagaacggcgccacagaggagttcaccgtcatcacgctggaggagtcg
ccagagaaagaacagctggcgtga
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