Gasterosteus aculeatus (three-spined stickleback): 120808667
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Entry
120808667 CDS
T07457
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120808667 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120808667 (myo5c)
04131 Membrane trafficking [BR:
gat04131
]
120808667 (myo5c)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120808667 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120808667 (myo5c)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120808667 (myo5c)
mRNA cycle factors
P-body specific factors
120808667 (myo5c)
Membrane trafficking [BR:
gat04131
]
Others
Actin-binding proteins
Myosins
120808667 (myo5c)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120808667 (myo5c)
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120808667 (myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
CCDC89
CCDC39
Csm1_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120808667
NCBI-ProteinID:
XP_040017637
LinkDB
All DBs
Position
19:16983794..16993749
Genome browser
AA seq
1801 aa
AA seq
DB search
MSLLELYTKYNRVWIPDAEHVWKSAEILKDFHFGDNILELLLEDGTEHHLPVDPSNPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHVYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMPRNQKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTNVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLPEFEHLRLLAADEFEYTSMGGDIRIEGVD
DKKDMEETRQTFSLLGKEKMPLCPSELNFPLVSRFRWLPLSSSPGLKEDFQSDVFKVLAA
ILHLGNVEIRNSGDAHSSVPPGDPHLAAFCELLSASAEGLVRWLCHRRIVLVAETVVKPV
PKERAVSARDALAKQIYAHLFDCIIKRINTALQVPGQQHAFIGVLDIYGFETFDINSFEQ
FCINYANEKLQQQFNLHVFKLEQEEYMREDIPWTLIDFYDNQPVIDLIEAKMGILDLLDE
ECLFPQGTDQSWLQKLFNYLDANPLFEKPRLSNEAFVIQHFADKVEYQCTGFLEKNRDAL
YEELVDILRDSKFPFLANFFQEEKQSSVNSKGIKVRPARPGVKAANKQLRTSVGDKFCSS
LSLLMETLNATTPHYVRCIKPNDVKLPFEYDSRRVVQQLRACGVLETIRISAQSYPSRSF
STTPFYVSSTKSPCAHVVLAHLFSLNRWTYIEFYSRYSILMSNQEAILSDKKQTCKNVLQ
RLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACATIQKHVRGWCQRRKYLRMRAA
AIILQQYIRGKKSIRKTVSAAALKQGWATLVIQRYWRGYRMKQIFLVVRLASITIQAFTR
GWMARKRYKKMIEVQKALILQKYARAWLARRRFQTMRRLVINVQLSFRVQQLRKKVEEQN
KENRGLMERLTHLASANSHTVDRLQGLEAQLEKSNSQKASVEAREKKVKEDASLTTAQLQ
KEIDAVKLEKQNLEKRLDVSIKEAQESFDLIKRNLQEEKEYEARLRKIAENNIDIQTQDH
EREVESLKEEIKRLKEERVSLQRKIEEGGQVNSDLQEQLVQLTKHVKVIPELRRDLNKLQ
NQKNSMDRKMKQQSEQARAKMNDITRQLRGDVVEEDVVLGQTPDDSEEIDEGDDLLASFD
GLQKAIRILENRQKELKESHETQVEGLNLKMDHLQNENSKLQNLFQEKSNLNENIRQEVA
RLSSENSVLPELKLQASELQRQKQELESHLEVQSRELAEKTEEITTIFQKKIQEESSQRR
HFEEKAEELEELKTELQGRVEDLEDETNHLKRQLLMESEAKNKLRQETSQLTAENMDFEE
QLDQKDRIIKKLQNQIKSLQTSQKAEQTPTPAIPKDYLGMLEYKREDESKLIQNIILDLK
PKGVVVNVIPGLPAYILFMCVRHADYLNDEVKLKSLMSGIISAVKKVIMSHRKDFELLSF
WLSNTYQLLNCLKQYSGEEEFLKQNTPRQKKNCLQNFDLSEHRQIFSDLAIQIYHQFVSV
MEKTLTPAIVPALLEHESLQGFSSMKPTGFRKRSNSTCEDSETHTISSIVQQLSVFHSIM
SQHGMEPGLINQAVKQMFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEKEL
QSSHAIDTLQPLSQAAWLLQVNKSTDDDAKEITDKCTELNPVQIVKILNSYTPIDDFEKR
VTSSFVRKVQSLLHDRDGSTSQLMLDSDYRFQVTFPYRPSSQALELLQVPSSLHLGFLTR
I
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgttggaactgtacaccaagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcggccgaaattctgaaagactttcattttggggacaatattcttgaatta
cttcttgaagatggcactgagcaccacctccccgttgacccgtcgaaccctcaactccct
ccgcttcgcaacccggacatcttggtgggggagaacgacctcactgccctcagctacctg
cacgaacctgcagtcctgcataatctcaaagtgcgattcgtggagtccagaatcatctac
acctactgtggtattatactggtggctgtgaatccatacaaacagctgcacgtctatggg
gatgcaatcattcacgcctactcaggccagaacatgggggacatggaccctcatatattt
gcagtagcagaagaggcttacaaacagatgcccagaaaccagaagaaccagtctatcatt
gtcagtggtgaatccggagctggcaaaaccgtgtctgctcggtacgccatgaggtacttt
gctgttgtgagcaaatctggaagtaaaactaacgttgaagacaaagtcctggcatccaat
ccgataaccgaggcaattggaaacgcaaagaccaccaggaacgacaacagcagtcgtttt
gggaaatacaccgagatcggcttcgacaggaggtaccggatcatcggagcgaacatgagg
acctatctcttagagaaatccagagtcgtcttccaggccgacaacgagcgaaactatcac
atattctaccagatgtgttcttgtgctcacctgccagaattcgagcatctgagactgttg
gctgcggatgagtttgagtacacctcaatgggcggagatatccgtatcgaaggtgtagat
gacaagaaggacatggaggagacccgacagaccttctcgctgctgggtaaagaaaaaatg
ccactttgtccgtcagaattaaactttcctttggtgtcacgtttccgatggcttcctctc
tcttcctctccagggttgaaggaggactttcagtcggacgtgttcaaagttttggctgcc
attttacatttgggaaatgtggaaatccgaaactctggagatgcacattcatcagttccc
cccggtgatccacacctggcggccttctgtgagctgctgagcgcgagtgcagaagggttg
gtccggtggctgtgccatcggaggatcgttctggtggctgagacggtggtgaagccggtg
cccaaagagcgggctgtaagcgccagagatgcccttgccaagcagatctatgcccatttg
tttgactgcattatcaagaggataaacactgcactgcaggttccaggacagcagcacgcc
ttcatcggtgtactggacatttatggctttgaaacatttgacatcaacagctttgaacag
ttttgtatcaactatgcaaatgagaagcttcaacagcagtttaacttgcatgtgttcaag
cttgagcaggaggagtacatgagagaggacataccgtggacgttgatagacttctacgac
aatcagccggtcattgacctgattgaggccaagatggggatcctggacttgctcgatgaa
gagtgtttgtttcctcagggaaccgatcaaagctggctgcaaaagctgttcaactacctg
gatgccaatcctctgtttgagaagcccaggctatcaaacgaggcctttgttattcaacac
tttgcagacaaggtggaatatcaatgtacaggttttcttgaaaagaacagagacgctctc
tatgaagaactggttgacattttgcgagacagtaagtttccttttctagccaacttcttc
caagaggagaagcaaagctctgtgaacagtaaaggtatcaaagtgagacctgccagacct
ggagtgaaagcagctaacaaacagttgagaacctcagtgggagataagttctgcagctcc
ctctctttactgatggaaacactgaatgctaccaccccacactatgtacgctgcattaag
cccaatgacgtaaagctcccgtttgaatatgactccagaagggtggtgcagcagttgcga
gcgtgtggggtccttgaaactattcgcatcagtgcacagagctatccatccaggtcattc
tctactacacctttttatgtcagctcaacgaaatctccatgtgctcacgttgtattggct
cacctgttttctcttaacaggtggacatacattgagttttatagccgttacagtatcctg
atgtcgaaccaggaggcgatcctcagtgacaagaaacagacctgcaagaacgtcttgcag
aggttaattcaggaccccaatcagtacaagtttggtcggacaaagatctttttccgagcc
ggtcaagtggcttatctagagaagctgcgtctggaccgactgagaggagcctgcgctaca
atccagaaacatgtccgtgggtggtgccagaggaggaagtacctgcgcatgagagcggct
gccatcatcctccagcagtacatccggggaaagaagtcaattcgcaaaacggtgagtgct
gcagcactgaagcagggctgggccacgctggtgatccagagatactggagaggttaccgc
atgaaacagattttcctggtggtccgtctggcttccatcaccatccaggccttcacgcgg
ggttggatggcccgaaaacggtacaagaagatgatcgaggtgcagaaagcgctcattcta
caaaagtatgccagagcatggctggcacggcggcgttttcaaaccatgcggcggctggtg
atcaacgttcagctctccttcagagttcagcagctcagaaagaaggttgaagagcagaac
aaagagaaccgcggattgatggaaagactgacacacttggccagcgcaaactctcatacc
gtcgacaggcttcagggtctggaggcacagttggaaaaatccaacagccaaaaagcctcg
gtggaggccagagagaagaaagtgaaagaagacgcaagtctgacaactgcacagctccag
aaggaaatagacgcagtaaagctcgaaaagcagaacttggagaaaaggttggacgtttcc
atcaaagaggcacaagagagcttcgatctgataaagaggaacctccaggaagagaaggag
tatgaagcaaggttaagaaaaattgcagagaacaacattgacatccaaacacaggaccat
gaaagggaagtggaatctctgaaggaggagattaagagactgaaagaagagcgagtctcc
ctgcagagaaagatcgaggagggcggccaggtgaactccgaccttcaggagcagctcgtc
cagctcaccaaacacgtcaaggtcattccggagctccgcagagatctcaacaaactgcaa
aaccagaagaacagcatggaccgaaagatgaagcaacagtcagaacaagcaagagctaaa
atgaacgatattacgagacaacttcgtggtgatgttgtagaggaggacgttgttttgggg
caaactccagacgactctgaggagattgatgaaggtgatgatttgctggcttcctttgat
ggtctacagaaagcgatcagaatactagaaaaccgccagaaggagctgaaggaaagccac
gagacacaagtggagggcttaaacttgaagatggaccaccttcaaaatgagaacagcaag
ttgcagaacctgttccaggagaaaagtaacctcaatgagaatattcgccaggaagtggcc
agactcagcagcgagaactcagttttaccggagctcaagctgcaggcttcagagctgcag
agacaaaagcaagaattggagtcccacctagaggtgcagagcagagagctagcagaaaaa
accgaggagatcacaaccatttttcaaaagaagattcaagaagaaagctcccaacgccgg
cactttgaggaaaaagctgaagagctggaggagttgaagacggagcttcaaggcagagtg
gaggatctggaagacgagaccaatcatttgaagaggcagctgctgatggagagcgaggcc
aagaacaaactgagacaggagacttcacagttaaccgctgagaatatggactttgaagag
cagctcgaccagaaagacagaataataaagaaactgcagaatcagataaagagccttcaa
acatcacagaaagccgagcaaacgcccacaccagccattcccaaagattacctcggaatg
ttggagtacaagagagaggatgaatccaagctcattcaaaacatcattctggacctgaag
cccaaaggtgtggtggtcaacgtgattcccggtctgccagcgtacatcctcttcatgtgc
gtccgccatgccgactacttgaacgatgaagtcaaattgaagtctctcatgagcgggatc
atcagtgctgtcaaaaaagtcatcatgagtcatcgcaaagactttgagttgctgtcgttt
tggctctcaaacacgtatcagctgctcaactgtctgaaacagtacagcggggaggaggag
ttcctgaagcaaaatactcctcgacagaaaaagaattgcttgcagaatttcgatttgtcg
gaacacagacagattttcagtgacctggccattcaaatctaccaccagtttgtctccgtc
atggaaaagactctaactccagcaattgtacccgctttgttggagcacgagagcctacag
gggttttctagcatgaagccgacgggcttcaggaagcgctccaacagcacctgcgaggac
tccgagacgcacaccatctcctcaatcgtccagcagctcagtgtcttccactccatcatg
agccagcatggcatggagccggggctcatcaaccaggccgtcaagcaaatgttcttcctg
gtcggtgcgaccaccctcaacaacatcatgctccgcaaagacatgtgctcctgcagaaag
ggaatgcaaatcaggtgtaacatcagttacctggaggaatggctgaaggagaaggagctg
caaagctctcatgctatagatactctgcagccgttgtctcaggccgcctggctactgcaa
gtcaacaagtccactgacgacgacgccaaagagatcactgacaaatgcaccgagctcaac
cctgttcagattgtgaaaattttaaactcctacacgcccattgatgattttgagaaaagg
gtgacgtcgtcatttgttcgcaaagttcagtctttactgcatgatcgggacgggtccacc
tcacagctgatgctggactcagactatcggttccaggtcacgtttccttaccgcccgtcc
tcgcaggctctggagctgctgcaggtcccgagcagccttcacctgggctttctaaccagg
atctga
DBGET
integrated database retrieval system
