Gasterosteus aculeatus (three-spined stickleback): 120808948
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Entry
120808948 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41-like
KO
K03730
class B basic helix-loop-helix protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120808948
Transcription factors [BR:
gat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120808948
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Ribosomal_60s
DCX2_DCDC1
Oscp1
Motif
Other DBs
NCBI-GeneID:
120808948
NCBI-ProteinID:
XP_040018257
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Position
XIX:9500133..9504063
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AA seq
431 aa
AA seq
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MDERIAHLQDRQFMEHAEFLGVDYSSLYMCKSKRGIKREDGGKDAYKLPHRLIEKKRRDR
INECIGQLKDLLPEHLKLSTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIVALQNGDRT
ANSSIHADLDAFHSGFQACAKEVLQYLGQFENWTTREQRCAQLIGHLHKVLAQFQAGAPP
LQHQLPAAGDAQDGHKADSQANKGPVIQRTQGGELNENDTDTDSGYGGEAERXDGKDKEC
ERNNAQGAKVVKIKQEFGDDRVAKKPKMNWPGNGSGGADPARPDLAFMNTLVGISGAGQQ
TPICMPFYFINPSAAASYMPFFDKSNIEKYMYPAAAALASPFPWLYPAHAAAAAAAAAAA
AFPGLSVHVGASPGSKDLHGAESDESRDAEFGSPGEREDSPGIDYGEDDVADASQESEDS
PRAQLPACQTS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaatcgcgcatttacaggacagacagtttatggagcacgcagaattcttg
ggggtggattactcctctctctacatgtgcaaatccaaacgaggcatcaagcgggaggat
ggtgggaaggacgcctacaagttacctcaccggttgatagagaagaagaggagagacaga
atcaacgaatgtatcggccagctgaaggatttgttaccggagcatctgaagctgtcgacg
ctcgggcatctggagaaagcggttgtcctggagttgacgttgaagcacttgaacgctctg
acggccgtcaccgagcagcagcaccagaagatcgttgctttgcagaatggggaccggaca
gcgaactcgtccatacacgcagatctggacgcgttccactccggcttccaggcctgtgcc
aaagaggtcctgcagtatctgggtcagtttgagaactggacgacgcgagagcagcggtgc
gcgcagctcatcggccaccttcacaaggtgctggcgcagttccaggccggcgcgccgccg
ctccagcaccagctacccgccgccggggacgcacaggatggccacaaagccgacagccaa
gctaataaagggccggtcatccagaggacccaaggcggggagctcaacgagaacgacacg
gacacggacagcggctatggtggcgaagccgaaaggngcgacggcaaagataaagaatgt
gagcgcaataacgcgcagggagccaaggtggtgaagatcaaacaagagtttggagatgat
cgcgttgccaaaaaaccaaagatgaactggcctgggaacgggtcaggtggcgcagacccc
gctaggcccgatctggcgtttatgaacactctggtgggaataagcggcgcgggacagcaa
acacctatttgcatgcctttctacttcatcaacccttcggccgcggcttcttatatgcca
tttttcgacaaaagcaacattgaaaagtacatgtacccagcggcggccgctctggcatct
cctttcccctggctgtaccccgcgcacgcggcggccgcggcggcggcggcggcggcagcg
gctttccccggcttgtccgtgcatgttggagcctctcctgggtccaaggacctccacggt
gcagagagcgacgagtcacgcgatgctgagttcgggtcaccaggggagcgcgaggatagt
cccgggatcgactacggggaggatgacgtagcagacgcgtcccaagagagcgaggacagt
cctcgcgctcagcttcctgcgtgtcaaacgagctaa
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