Gasterosteus aculeatus (three-spined stickleback): 120809022
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Entry
120809022 CDS
T07457
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120809022 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120809022 (exosc6)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120809022 (exosc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120809022
NCBI-ProteinID:
XP_040018440
UniProt:
A0AAQ4P8B4
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Position
XIX:2386489..2388358
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AA seq
274 aa
AA seq
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MPTDNKRVQGPEVSQCPSLFSSKPAASLPSKGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGSTKLMCCVYGPREIERKDETDMTCGRLVTDMRFAPFSCLERGAWIQGSQEKDL
SLMLQESLQPAVRLNKYPRSQIEVNVMVLESSGSVLAHAVTCASLALADAGIEMYDLVLG
CSVRQDGASYVVDPSRAEESRRSSVGRENEGGLTIAFLPSLNQISGLESDGEMTEETLTA
AVRTCIEGCYKLYPVVQQALCKAVRRAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacaacaaacgtgtgcagggcccagaagtgtcccaatgcccgtctctgttt
tctagcaaaccagcggcctctctcccctcgaaaggcccgagagcggacggtcggcagcgg
gaccaagtggacgtccggccggtctttgtccgctgcgggctggtgagtcaggccaaaggc
tccgcgtacatcgaggctggaagcaccaagctgatgtgctgcgtttacggccccagagaa
atcgagcggaaagatgagaccgacatgacatgtggacggttggttactgacatgcgtttc
gctccgttctcctgtctggagaggggagcctggattcaggggagccaggaaaaggacctc
tccctgatgctgcaggagagcctgcagcccgccgtgcggctcaacaaatatccccgctct
cagatcgaggtcaacgtgatggtcctcgagagcagcggctccgtcctggcccacgcggtc
acgtgcgcctcgctcgctctggcagatgccgggatcgaaatgtacgacctggtcctcggt
tgttccgtgcggcaggatggcgcctcgtacgtggtcgacccttctcgcgccgaggaaagc
aggcgcagctcggtcggcagagagaacgagggcggcctgaccatagcgttcctgccgagc
ctgaaccagatttctgggctggagtcggatggagaaatgacggaagagaccctgacagcc
gcggtgcggacctgcattgagggatgctataaactgtacccggtcgtccagcaagccctg
tgcaaggccgttcggcgggctgcgccccccccgtcagagagctga
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